Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2409
Parameters: 2 7 7 80 10 50 1000
Length:  154369

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110353--110416
30
2.0
30
82
8
74
50
1
0
48
1.10
111315--111347
5
6.8
5
86
6
50
21
0
0
78
0.75
120842--120876
14
2.6
14
90
4
54
80
2
11
5
1.00
125104--125178
20
3.8
20
80
3
80
40
12
13
34
1.81
125101--125178
40
2.0
39
87
2
111
39
12
12
34
1.82
125706--126500
32
26.2
30
90
3
786
18
17
33
30
1.94
127719--127787
8
8.0
9
82
10
65
7
4
4
84
0.88
127719--127774
9
6.1
9
79
10
51
5
5
5
83
0.89
127724--127782
17
3.2
17
85
9
73
5
3
5
86
0.78
127722--127796
25
3.0
25
84
9
91
6
4
5
84
0.88
127743--127796
8
6.6
8
82
4
63
5
1
5
87
0.74
127734--127787
1
54.0
1
77
0
54
5
1
3
88
0.67
141807--141881
20
3.8
20
80
3
80
40
12
13
34
1.81
141804--141881
40
2.0
39
87
2
111
39
12
12
34
1.82
149611--149673
19
3.3
19
77
6
74
33
17
19
30
1.95
152516--152595
39
2.1
39
100
0
160
42
25
7
25
1.80
153725--153797
19
3.8
19
80
3
92
39
12
13
34
1.82
153722--153797
39
2.0
38
89
2
116
39
13
13
34
1.83

Tables:   1   2

The End!