Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2416
Parameters: 2 7 7 80 10 50 1000
Length:  24604

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1979--2069
31
2.9
31
82
8
96
59
5
1
34
1.28
4830--4873
20
2.2
20
87
0
61
38
0
2
59
1.10
12145--12188
14
3.1
14
76
0
52
77
2
0
20
0.88
12893--12928
18
2.0
18
100
0
72
38
5
5
50
1.49
12949--13850
308
2.9
308
93
3
1518
32
2
13
51
1.55
15580--15609
14
2.2
14
94
5
53
30
13
23
33
1.93
22349--23442
166
6.7
166
76
11
927
28
11
7
52
1.65
22487--22772
154
1.9
151
87
3
423
29
11
7
51
1.65
23769--23842
24
3.0
24
80
9
78
71
1
22
4
1.10
23769--23834
13
5.3
12
71
18
55
72
1
24
1
1.01

Tables:   1

The End!