Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2417
Parameters: 2 7 7 80 10 50 1000
Length:  26828

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--1096
79
2.6
79
83
2
235
29
16
28
24
1.97
893--1093
78
2.6
78
82
0
231
29
16
29
24
1.97
1048--1119
28
2.6
28
88
0
99
23
19
34
22
1.96
1108--1280
52
3.3
52
77
9
174
31
12
25
30
1.93
3721--3746
13
2.0
13
100
0
52
38
15
15
30
1.88
3784--3851
19
3.9
18
76
23
83
38
14
11
35
1.83
3806--3830
13
1.9
13
100
0
50
32
16
16
36
1.90
3787--3849
32
2.0
32
96
0
117
36
15
12
34
1.86
3907--3963
21
2.7
21
97
0
105
36
19
10
33
1.86
3973--4000
14
2.0
14
100
0
56
7
7
0
85
0.73
6326--6364
17
2.3
17
95
0
69
25
28
0
46
1.53
11501--11542
13
3.2
13
80
10
50
83
9
7
0
0.81
12262--12305
1
44.0
1
93
0
61
93
0
2
4
0.42
12259--12296
19
2.0
19
100
0
76
84
0
5
10
0.77
12310--12366
21
2.7
21
97
0
105
33
10
19
36
1.86
12422--12489
19
3.9
19
78
21
85
35
11
14
38
1.83
12443--12467
13
1.9
13
100
0
50
36
16
16
32
1.90
12424--12486
32
2.0
32
96
0
117
34
12
15
36
1.86
12529--12554
13
2.0
13
100
0
52
30
15
15
38
1.88
12509--12575
33
2.0
33
88
0
98
25
14
16
43
1.86
14900--15181
102
2.8
102
82
7
349
29
25
12
32
1.92
14900--15181
153
1.8
153
81
7
349
29
25
12
32
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14901--15187
51
5.6
50
83
4
299
28
26
12
32
1.92

Tables:   1

The End!