Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2418
Parameters: 2 7 7 80 10 50 1000
Length:  62262

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4588--4659
20
3.7
20
85
7
85
31
15
13
38
1.87
8664--8733
34
2.1
34
91
0
113
30
18
17
34
1.94
10914--10950
13
2.8
13
95
0
65
35
16
13
35
1.88
16726--16793
3
22.7
3
90
0
109
29
4
0
66
1.11
17160--17213
22
2.5
22
78
0
63
40
27
1
29
1.67
17837--17868
16
2.0
16
93
0
55
62
3
0
34
1.11
20754--20882
53
2.5
51
75
17
131
41
3
0
55
1.15
20754--20840
18
4.6
19
68
19
56
41
2
0
56
1.12
20851--20914
17
3.8
16
76
21
51
39
3
0
57
1.14
20808--20907
17
5.7
17
67
29
59
43
2
0
55
1.11
21574--21604
3
10.0
3
93
6
53
32
0
0
67
0.91
25106--25381
139
2.0
139
99
0
543
28
17
17
36
1.92
29476--29532
22
2.6
22
80
8
62
68
1
24
5
1.20
30189--30341
58
2.6
57
83
8
200
32
12
11
43
1.77
34164--35088
28
32.5
28
86
4
1230
21
17
31
29
1.96
34164--35088
256
3.6
254
87
4
1290
21
17
31
29
1.96
40908--41031
48
2.5
49
83
7
155
38
8
21
31
1.83
41137--41161
13
1.9
13
100
0
50
36
16
16
32
1.90
45948--45986
19
2.1
19
85
0
51
69
7
10
12
1.37
49506--49573
19
3.9
19
78
21
85
35
11
14
38
1.83
49527--49551
13
1.9
13
100
0
50
36
16
16
32
1.90
49508--49570
32
2.0
32
96
0
117
34
12
15
36
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49613--49638
13
2.0
13
100
0
52
30
15
15
38
1.88
49593--49659
33
2.0
33
88
0
98
25
14
16
43
1.86
52000--52123
51
2.4
52
85
6
162
33
21
11
33
1.89
52000--52123
54
2.4
51
85
6
160
33
21
11
33
1.89
52134--52359
52
4.3
52
80
6
226
30
25
11
32
1.91
52370--52576
79
2.6
79
81
1
218
24
29
17
28
1.97

Tables:   1

The End!