Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2423
Parameters: 2 7 7 80 10 50 1000
Length:  25229

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5246--5299
29
1.9
27
82
14
65
42
25
1
29
1.66
6013--6319
61
4.9
61
73
16
243
20
34
13
31
1.91
6074--6292
95
2.3
96
88
5
320
20
33
12
33
1.91
6013--6324
35
9.7
33
75
15
255
19
34
13
32
1.90
6327--6429
32
3.2
33
86
6
158
25
36
18
19
1.94
6442--6898
49
9.5
49
85
9
575
24
26
18
31
1.98
6434--6907
92
5.0
93
87
7
596
24
26
17
31
1.97
6433--6959
198
2.7
193
83
9
596
24
26
17
31
1.97
6433--6961
241
2.2
233
79
11
500
24
26
17
31
1.97
7823--7889
33
2.0
33
88
0
98
34
11
13
40
1.81
7843--7867
13
1.9
13
100
0
50
36
16
16
32
1.90
7932--7956
13
1.9
13
100
0
50
32
16
16
36
1.90
7965--8088
52
2.4
52
93
4
207
34
18
17
29
1.94
10894--10919
13
2.0
13
100
0
52
30
15
15
38
1.88
10874--10937
32
2.0
33
90
3
103
29
14
15
40
1.86
13756--13822
33
2.0
33
88
0
98
34
11
13
40
1.81
13776--13800
13
1.9
13
100
0
50
36
16
16
32
1.90
13863--13887
13
1.9
13
100
0
50
32
16
16
36
1.90
13876--14019
52
2.8
52
87
5
211
34
18
16
30
1.94
23608--23661
1
54.0
1
83
0
63
90
5
3
0
0.53
23607--23665
13
4.3
14
85
10
77
88
8
3
0
0.63
24655--25229
55
10.6
55
93
5
944
28
30
20
20
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24758--24895
27
5.0
27
60
16
68
28
29
19
21
1.98

Tables:   1

The End!