Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2425
Parameters: 2 7 7 80 10 50 1000
Length:  61092

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2087--2140
2
28.5
2
80
10
51
46
0
3
50
1.19
2065--2153
31
2.7
33
89
10
146
44
0
6
48
1.29
4330--4379
2
25.0
2
100
0
100
50
0
50
0
1.00
5517--5546
15
2.0
15
100
0
60
33
0
6
60
1.23
5643--5669
2
13.5
2
100
0
54
51
0
0
48
1.00
6511--6570
29
2.1
29
93
0
102
35
16
21
26
1.95
14239--14278
4
9.8
4
83
5
53
27
2
0
70
1.01
24516--24563
1
48.0
1
78
0
51
89
4
4
2
0.64
24518--24575
7
8.6
7
88
3
66
86
3
8
1
0.76
24519--24578
26
2.3
25
82
5
66
85
3
10
1
0.79
25544--25999
61
7.5
61
82
3
488
27
25
16
30
1.96
25980--26163
41
4.4
42
81
6
196
23
22
13
40
1.89
29202--29391
79
2.4
79
76
3
211
30
24
12
33
1.92
30344--30398
15
3.7
14
78
7
56
76
1
0
21
0.88
30339--30401
7
8.7
7
83
10
65
76
1
0
22
0.88
30339--30393
22
2.5
22
85
8
69
76
0
0
23
0.79
30339--30401
29
2.2
29
86
11
85
76
1
0
22
0.88
30744--30817
28
2.7
28
85
2
96
50
20
20
9
1.76
38830--38872
15
2.9
15
92
0
68
39
27
2
30
1.69
45494--45547
20
2.7
20
85
0
72
35
14
14
35
1.88
52683--52707
13
1.9
13
100
0
50
32
16
16
36
1.90
52757--52812
19
2.8
20
86
2
78
39
16
14
30
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52797--52823
13
2.1
13
100
0
54
40
14
14
29
1.86
56297--56445
52
2.9
51
86
7
210
30
16
18
34
1.94
56434--56458
13
1.9
13
100
0
50
36
16
16
32
1.90
56499--56565
33
2.0
33
88
0
98
40
14
11
32
1.83
56521--56545
13
1.9
13
100
0
50
32
16
16
36
1.90

Tables:   1

The End!