Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2427
Parameters: 2 7 7 80 10 50 1000
Length:  50549

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24888--25278
88
4.5
87
75
7
292
29
23
11
35
1.90
24888--25256
175
2.1
175
82
4
433
29
23
11
36
1.89
25507--25597
45
2.0
45
97
0
173
20
19
12
47
1.81
31429--31453
13
1.9
13
100
0
50
36
16
16
32
1.90
31407--31473
33
2.0
33
88
0
98
35
13
16
34
1.88
32104--32166
32
1.9
33
87
3
92
44
14
14
26
1.83
33043--33185
55
2.7
52
79
4
160
25
24
14
35
1.93
33849--33873
13
1.9
13
100
0
50
36
16
16
32
1.90
33829--33894
32
2.0
33
94
2
116
34
12
16
36
1.86
34884--34930
21
2.3
20
82
13
60
25
17
14
42
1.87
43661--43840
79
2.3
79
82
2
220
31
15
28
25
1.96
43851--44245
52
7.6
49
69
9
207
32
11
26
29
1.91
43741--44234
261
1.9
262
87
3
737
31
12
27
28
1.92
46609--46634
13
2.0
13
100
0
52
38
15
15
30
1.88
46621--46663
21
2.0
21
90
0
68
32
16
6
44
1.74
46679--46730
13
3.5
13
73
26
50
36
17
13
32
1.89
46687--46749
19
3.7
18
76
24
73
36
17
12
33
1.88
46679--46751
32
2.3
32
97
0
137
35
17
12
34
1.88
46718--46779
19
3.2
19
73
13
63
27
16
14
41
1.87
47507--47555
25
1.9
26
87
4
73
26
18
0
55
1.43

Tables:   1

The End!