Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2428
Parameters: 2 7 7 80 10 50 1000
Length:  35652

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1174--1317
50
2.8
51
81
1
164
40
12
16
29
1.85
2869--3535
155
4.3
155
73
10
466
35
12
19
31
1.89
2869--3539
314
2.1
313
79
6
716
36
12
19
31
1.89
2934--3947
158
6.4
155
71
10
500
37
13
18
30
1.89
4535--4884
158
2.2
159
82
3
411
39
13
19
28
1.89
10370--10441
28
2.6
29
82
6
85
12
19
8
59
1.58
13852--18879
158
32.2
157
69
12
1592
37
12
18
31
1.88
22265--22298
12
2.8
12
90
0
50
29
23
0
47
1.52
22265--22299
15
2.3
15
90
9
54
28
25
0
45
1.54
23985--24011
13
2.1
13
100
0
54
40
14
14
29
1.86
23997--24052
20
2.8
21
86
5
80
41
12
16
30
1.85
27328--27367
21
1.9
21
85
10
55
20
0
25
55
1.44
28586--28615
15
1.9
16
93
6
53
23
10
20
46
1.80
28965--29012
25
1.9
25
91
0
78
33
2
27
37
1.69
29652--29699
20
2.5
19
82
3
60
27
12
20
39
1.89
30157--30191
18
2.1
18
89
10
56
25
5
14
54
1.62
31151--31232
28
2.9
29
80
7
98
58
7
20
13
1.59
33640--33665
13
2.0
13
100
0
52
38
23
7
30
1.83
33622--33685
33
2.0
32
84
3
83
40
23
7
28
1.82

Tables:   1

The End!