Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2430
Parameters: 2 7 7 80 10 50 1000
Length:  16395

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1257--1806
33
17.6
32
75
14
345
20
30
13
35
1.91
1350--1419
26
2.6
27
88
4
97
22
31
12
32
1.92
1350--1428
28
2.9
27
87
7
99
21
30
15
32
1.94
1257--1789
67
8.6
65
72
18
313
20
30
13
36
1.90
1283--1779
125
4.0
123
79
10
445
19
30
13
36
1.90
1825--1918
44
2.2
42
86
3
125
31
25
14
27
1.95
1828--2944
49
23.7
47
74
13
779
25
25
18
30
1.98
2159--2944
101
8.3
92
77
12
425
24
25
19
30
1.98
1825--2943
144
8.0
140
75
14
644
25
25
18
30
1.98
1828--2943
237
4.8
234
83
7
1189
25
25
18
30
1.98
2399--2650
85
2.9
87
90
2
391
25
25
20
28
1.99
2575--2944
199
1.9
197
83
4
485
23
24
18
32
1.97
2571--2943
150
2.5
146
79
6
367
24
25
18
32
1.97
4673--5768
28
38.6
28
83
4
1194
23
17
27
31
1.97
4607--6225
84
19.1
84
79
6
1168
26
16
27
29
1.97
5763--6219
28
16.5
28
76
9
314
32
14
28
25
1.94
5676--6219
56
9.8
56
81
6
484
31
14
28
25
1.95
5676--6256
55
10.4
55
79
9
441
31
14
28
25
1.95
9931--9979
22
2.2
23
85
10
66
63
6
6
24
1.41
15751--15791
21
2.0
21
100
0
82
53
12
14
19
1.72

Tables:   1

The End!