Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2442
Parameters: 2 7 7 80 10 50 1000
Length:  10515

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
263--480
34
6.5
34
85
5
282
40
27
7
24
1.82
261--480
67
3.3
67
88
1
323
40
27
7
24
1.82
4546--4608
19
3.3
19
90
0
90
34
19
17
28
1.94
4913--5128
34
6.4
34
85
5
278
40
27
7
24
1.83
4911--5128
67
3.2
67
88
1
319
40
27
7
24
1.82
5421--5475
25
2.2
25
83
6
67
30
1
1
65
1.13
6935--6979
23
2.0
23
82
8
56
28
6
0
64
1.19
6944--7017
25
3.0
24
77
16
71
33
1
2
62
1.18
8432--8472
2
20.5
2
94
0
73
48
0
2
48
1.14
8668--8716
20
2.5
20
86
6
55
53
4
0
42
1.20

Tables:   1

The End!