Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2448
Parameters: 2 7 7 80 10 50 1000
Length:  83734

Tables:   1   

This is table  1  of  1  ( 67 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1301--1330
14
2.1
14
93
0
51
53
0
0
46
1.00
1829--1865
16
2.3
15
90
9
56
40
0
0
59
0.97
2078--2118
21
2.0
21
85
9
57
39
12
9
39
1.76
2158--2228
20
3.6
19
77
7
70
40
16
12
29
1.86
2198--2334
53
2.6
53
95
1
238
37
18
17
26
1.93
2298--2334
19
2.0
19
94
5
67
45
16
10
27
1.80
2358--2388
10
3.1
10
90
0
53
22
29
6
41
1.78
2376--2431
21
2.6
22
85
5
87
26
23
10
39
1.87
9425--9461
16
2.3
16
90
0
56
37
8
5
48
1.56
9565--9605
21
2.0
21
85
9
57
41
9
4
43
1.59
10200--10237
19
2.0
19
85
10
51
34
0
0
65
0.93
12210--12285
24
3.3
22
72
15
64
30
3
1
64
1.20
12897--12923
4
6.8
4
100
0
54
77
0
0
22
0.76
13402--13452
16
3.4
16
76
7
54
37
0
3
58
1.16
25402--25464
2
31.5
2
100
0
126
50
0
0
49
1.00
30973--31021
2
24.5
2
95
0
89
48
0
2
48
1.12
32291--32319
15
1.9
15
100
0
58
44
0
0
55
0.99
32816--32932
58
2.0
59
91
1
191
38
17
20
23
1.93
34869--35001
44
3.0
44
96
0
239
21
17
9
51
1.74
35933--35974
14
3.0
14
82
0
57
61
0
0
38
0.96
35993--36043
26
2.0
26
84
7
68
47
0
0
52
1.00
36004--36063
13
4.4
14
73
10
52
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36446--36478
11
3.0
11
90
0
57
66
0
0
33
0.92
36451--36484
17
2.1
16
88
5
50
67
0
0
32
0.91
36602--36650
21
2.3
22
82
13
66
53
0
0
46
1.00
36839--36870
2
16.0
2
100
0
64
50
0
0
50
1.00
38244--38369
59
2.2
58
88
2
189
50
5
2
41
1.38
40760--40940
96
1.9
96
95
0
326
20
32
19
26
1.97
41047--41077
2
15.5
2
100
0
62
48
0
0
51
1.00
41799--41823
2
12.5
2
100
0
50
48
0
0
52
1.00
48730--48967
126
1.9
126
90
1
379
21
28
19
29
1.98
48960--49001
21
2.0
21
90
4
68
21
28
26
23
1.99
48834--49348
147
3.5
146
92
0
805
21
29
19
29
1.98
51012--51059
20
2.5
18
78
21
53
45
0
0
54
0.99
52464--52497
17
1.9
18
88
5
52
70
5
0
23
1.09
53665--54655
111
8.9
111
94
0
1543
25
31
19
23
1.98
55701--55750
12
3.8
13
78
19
50
38
0
2
60
1.09
57723--57783
16
3.5
16
70
20
50
49
0
0
50
1.00
57718--57781
21
3.3
21
66
20
57
48
0
0
51
1.00
57706--57758
27
2.0
28
85
10
76
52
0
0
47
1.00
57719--57803
37
2.3
38
83
4
118
45
1
1
51
1.16
57772--57863
27
3.4
28
78
13
86
41
1
1
56
1.13
57815--57913
27
3.6
27
74
8
92
42
1
1
55
1.13
58322--58390
34
2.1
34
94
2
122
40
0
13
46
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59606--59701
10
9.1
11
70
13
51
60
1
0
38
1.04
59657--59685
13
2.1
14
93
6
51
51
0
0
48
1.00
61015--61060
15
3.2
15
78
6
51
65
2
4
28
1.23
61348--61417
27
2.5
28
75
9
72
71
2
0
25
1.00
61349--61394
18
2.6
17
80
10
56
67
4
0
28
1.10
61791--61843
17
2.8
19
80
11
65
69
0
0
30
0.88
61800--61844
19
2.4
19
79
17
58
68
0
0
31
0.89
61791--61846
10
6.0
10
78
14
57
67
0
0
32
0.91
62131--62184
22
2.5
20
80
11
63
62
1
0
35
1.06
62178--62217
19
2.0
20
95
4
73
60
0
0
40
0.97
62192--62228
14
2.5
15
86
8
58
62
0
0
37
0.96
62302--62361
27
2.3
26
85
8
77
50
1
0
48
1.11
62326--62358
17
2.0
17
88
5
50
45
0
0
54
0.99
62315--62360
21
2.2
21
88
0
65
50
0
0
50
1.00
70706--70751
24
1.9
24
86
0
65
52
0
0
47
1.00
70823--70867
18
2.8
16
86
10
56
57
0
2
40
1.11
70823--70883
8
6.9
8
74
20
50
59
0
1
39
1.08
70823--70888
28
2.5
26
73
11
62
59
0
1
39
1.07
70862--70921
22
2.7
22
85
12
79
68
0
0
31
0.90
70830--70883
10
5.9
9
75
12
56
61
0
1
37
1.07
70853--70939
19
4.8
19
70
23
62
67
0
0
32
0.91
71282--71342
28
2.1
31
84
9
83
34
1
8
55
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75833--75869
19
1.9
19
88
0
56
40
8
5
45
1.56

Tables:   1

The End!