Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2456
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 193328
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
File 2 of 2
Found at i:169797 original size:84 final size:84
Alignment explanation
Indices: 169642--169806 Score: 201
Period size: 84 Copynumber: 2.0 Consensus size: 84
169632 CATTTTCCAC
* * * *
169642 TTGCAACTCATTTCTTTTCTCCTCTAATTCATTTATTTTCTTTTTAAAAGAATTATTTTCTAAAC
1 TTGCAACTCATTTCTATTCTCCTCTAATTCACTTAATTTCTTTTTAAAAGAATTATTCTCTAAAC
169707 TCATTGATTTACTTTCATT
66 TCATTGATTTACTTTCATT
* *
169726 TTGCAACTC-TTTCATATTCTTCTCTAATTCACTTAATTTC-TTTT-CAAGAATATCATTCTCTA
1 TTGCAACTCATTTC-TATTCTCCTCTAATTCACTTAATTTCTTTTTAAAAGAAT-T-ATTCTCTA
* * *
169788 CACTTATTGATTTATTTTC
63 AACTCATTGATTTACTTTC
169807 TTCTTTGAGT
Statistics
Matches: 69, Mismatches: 9, Indels: 6
0.82 0.11 0.07
Matches are distributed among these distances:
82 6 0.09
83 9 0.13
84 54 0.78
ACGTcount: A:0.25, C:0.19, G:0.04, T:0.52
Consensus pattern (84 bp):
TTGCAACTCATTTCTATTCTCCTCTAATTCACTTAATTTCTTTTTAAAAGAATTATTCTCTAAAC
TCATTGATTTACTTTCATT
Found at i:173696 original size:34 final size:35
Alignment explanation
Indices: 173658--173724 Score: 102
Period size: 37 Copynumber: 1.9 Consensus size: 35
173648 CCTTACAACA
173658 CTATC-TTTC-AAGGCTAAGATAGAAACCTCTCTCT
1 CTATCTTTTCAAAGGCTAAGATAG-AACCTCTCTCT
173692 CTATCTTTTTCAAAGGCTAAGATAGAACCTCTC
1 CTATC-TTTTCAAAGGCTAAGATAGAACCTCTC
173725 AATCACTTAG
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
34 5 0.17
36 12 0.40
37 13 0.43
ACGTcount: A:0.30, C:0.25, G:0.12, T:0.33
Consensus pattern (35 bp):
CTATCTTTTCAAAGGCTAAGATAGAACCTCTCTCT
Found at i:174199 original size:13 final size:13
Alignment explanation
Indices: 174181--174206 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
174171 CAATTTTTTG
174181 TGTATCGATACAT
1 TGTATCGATACAT
174194 TGTATCGATACAT
1 TGTATCGATACAT
174207 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:174218 original size:32 final size:33
Alignment explanation
Indices: 174161--174224 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
174151 TATAAGCCAA
**
174161 TGTATCGATACAATTTTTTGTGTATCGATACAT
1 TGTATCGATACAATACTTTGTGTATCGATACAT
174194 TGTATCGATAC-ATACTTTGTGTATCGATACA
1 TGTATCGATACAATACTTTGTGTATCGATACA
174225 AGTTTGGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 18 0.62
33 11 0.38
ACGTcount: A:0.28, C:0.14, G:0.16, T:0.42
Consensus pattern (33 bp):
TGTATCGATACAATACTTTGTGTATCGATACAT
Found at i:174955 original size:21 final size:21
Alignment explanation
Indices: 174914--174957 Score: 54
Period size: 21 Copynumber: 2.1 Consensus size: 21
174904 CTCCCCTTTA
* *
174914 TCTCCCCCGTTTATTAATAAT
1 TCTCCCCCGTTAATCAATAAT
174935 TCTCCCCC-TTAATCAAGTAAT
1 TCTCCCCCGTTAATCAA-TAAT
174956 TC
1 TC
174958 ATATCAAAAA
Statistics
Matches: 20, Mismatches: 2, Indels: 2
0.83 0.08 0.08
Matches are distributed among these distances:
20 6 0.30
21 14 0.70
ACGTcount: A:0.25, C:0.32, G:0.05, T:0.39
Consensus pattern (21 bp):
TCTCCCCCGTTAATCAATAAT
Found at i:176140 original size:13 final size:13
Alignment explanation
Indices: 176122--176146 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
176112 ACTGAAGCAA
176122 TGTATCGATACAT
1 TGTATCGATACAT
176135 TGTATCGATACA
1 TGTATCGATACA
176147 ATCTGGAAAA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:179379 original size:34 final size:35
Alignment explanation
Indices: 179341--179407 Score: 102
Period size: 37 Copynumber: 1.9 Consensus size: 35
179331 CCTTACAACA
179341 CTATC-TTTC-AAGGCTAAGATAGAAACCTCTCTCT
1 CTATCTTTTCAAAGGCTAAGATAG-AACCTCTCTCT
179375 CTATCTTTTTCAAAGGCTAAGATAGAACCTCTC
1 CTATC-TTTTCAAAGGCTAAGATAGAACCTCTC
179408 AATCACTTAG
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
34 5 0.17
36 12 0.40
37 13 0.43
ACGTcount: A:0.30, C:0.25, G:0.12, T:0.33
Consensus pattern (35 bp):
CTATCTTTTCAAAGGCTAAGATAGAACCTCTCTCT
Found at i:179882 original size:13 final size:13
Alignment explanation
Indices: 179864--179889 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
179854 CAATTTTTTG
179864 TGTATCGATACAT
1 TGTATCGATACAT
179877 TGTATCGATACAT
1 TGTATCGATACAT
179890 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:179901 original size:32 final size:33
Alignment explanation
Indices: 179844--179907 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
179834 TATAAGCCAA
**
179844 TGTATCGATACAATTTTTTGTGTATCGATACAT
1 TGTATCGATACAATACTTTGTGTATCGATACAT
179877 TGTATCGATAC-ATACTTTGTGTATCGATACA
1 TGTATCGATACAATACTTTGTGTATCGATACA
179908 AGTTTGGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 18 0.62
33 11 0.38
ACGTcount: A:0.28, C:0.14, G:0.16, T:0.42
Consensus pattern (33 bp):
TGTATCGATACAATACTTTGTGTATCGATACAT
Found at i:188630 original size:1 final size:1
Alignment explanation
Indices: 188626--188691 Score: 60
Period size: 1 Copynumber: 66.0 Consensus size: 1
188616 TTCTTTTTTC
* * * * * * * *
188626 AAAAAAAAAACAAAAAACAACAAAAAAACAAAAAAACAAAAAAAAACAGAAAAAAAGAAAAAAAA
1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
188691 A
1 A
188692 GAAGAATATG
Statistics
Matches: 49, Mismatches: 16, Indels: 0
0.75 0.25 0.00
Matches are distributed among these distances:
1 49 1.00
ACGTcount: A:0.88, C:0.09, G:0.03, T:0.00
Consensus pattern (1 bp):
A
Found at i:188652 original size:18 final size:17
Alignment explanation
Indices: 188627--188689 Score: 83
Period size: 18 Copynumber: 3.5 Consensus size: 17
188617 TCTTTTTTCA
188627 AAAAAAAAACAAAAAAC
1 AAAAAAAAACAAAAAAC
188644 AACAAAAAAACAAAAAAAC
1 AA-AAAAAAAC-AAAAAAC
188663 AAAAAAAAACAGAAAAA-
1 AAAAAAAAACA-AAAAAC
188680 AAGAAAAAAA
1 AA-AAAAAAA
188690 AAGAAGAATA
Statistics
Matches: 42, Mismatches: 0, Indels: 7
0.86 0.00 0.14
Matches are distributed among these distances:
17 5 0.12
18 28 0.67
19 9 0.21
ACGTcount: A:0.87, C:0.10, G:0.03, T:0.00
Consensus pattern (17 bp):
AAAAAAAAACAAAAAAC
Found at i:188694 original size:10 final size:10
Alignment explanation
Indices: 188626--188691 Score: 75
Period size: 10 Copynumber: 6.8 Consensus size: 10
188616 TTCTTTTTTC
188626 AAAAAAAA-A
1 AAAAAAAACA
*
188635 ACAAAAAACA
1 AAAAAAAACA
188645 ACAAAAAAAC-
1 A-AAAAAAACA
188655 -AAAAAAACA
1 AAAAAAAACA
188664 AAAAAAAACA
1 AAAAAAAACA
* *
188674 GAAAAAAAGA
1 AAAAAAAACA
188684 AAAAAAAA
1 AAAAAAAA
188692 GAAGAATATG
Statistics
Matches: 48, Mismatches: 5, Indels: 7
0.80 0.08 0.12
Matches are distributed among these distances:
8 8 0.17
9 7 0.15
10 26 0.54
11 7 0.15
ACGTcount: A:0.88, C:0.09, G:0.03, T:0.00
Consensus pattern (10 bp):
AAAAAAAACA
Found at i:189918 original size:61 final size:60
Alignment explanation
Indices: 189660--190503 Score: 996
Period size: 61 Copynumber: 14.4 Consensus size: 60
189650 CTTCTTCCAC
*
189660 TTTT-CAGTCCTCAAAGAGCAGGATGCCTTTTCCTTTT-AAAGCCCACACAAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACG-C-TTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
** * * * *
189720 CATCCCATTCCTCAAAGAGCAGGA----TGCCTTTT-AAAGCCCACACAAGCTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
* * * * *
189775 CTTT-CAGTCCTCAAAGAGCAGGACACCTTCTCCTTTGC-AAGCCCACATAAGCTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGAC-GCTT-TCCTTTTCAAAGCCCACACAAGTTGGTGGCA
** * *
189835 CCTT-CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACTCGAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACG-CTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
* *
189895 TTTTCCAGTCCTCAAGGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACAAGTTGCTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACG-CTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
*
189956 TTTTCTAGTCCTCAAAGAGCAGGACGC---CC--TTCAAAGCCCACACAAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
* *
190011 TTTTCCAGTCCTCAAAGAGCAGGACG----CC-TTTGAAAGCTCACACAAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
* *
190066 TTTTCCAGTCCTCAAAGAGCAGGATGCTTTCTCTTTGCAAAGCCCACACAAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTC-CTTTTCAAAGCCCACACAAGTTGGTGGCA
** * *
190127 CCTTCCAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACGAGTTGGTGACA
1 TTTTCCAGTCCTCAAAGAGCAGGACG-CTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
*
190188 TTTTCCAGTCCTCAAAGAGCAGGA--C--TCC-TTTCAAAGCCCACACCAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
190243 TTTTCCAGTCCTCAAAGAGCAGGACG---T-C-TTTCAAAGCCCACACAAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
* *
190298 TTTTCCAGTCCTCAAAGAGCAGGATGCTTTCTCTTTGCAAAGCCCACACAAGTT-GTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACGCTTTC-CTTTTCAAAGCCCACACAAGTTGGTGGCA
** * *
190358 CCTTCCAGTCCTCAAAGAGCAGGACGCCTTTCCTTTGCAAAGCCCACACAAGTTGGTCGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACG-CTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
** * **
190419 CCTTCCAGTCCTCAAAAAGCAGGACGCCTTTCCTTTTCAAAGCCCACATGAGTTGGTGGCA
1 TTTTCCAGTCCTCAAAGAGCAGGACG-CTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
*
190480 CTTTT-TAGTCCTCAAAGAGCAGGA
1 -TTTTCCAGTCCTCAAAGAGCAGGA
190504 TGCACTTTAT
Statistics
Matches: 693, Mismatches: 61, Indels: 59
0.85 0.08 0.07
Matches are distributed among these distances:
54 20 0.03
55 231 0.33
56 4 0.01
57 2 0.00
58 2 0.00
59 9 0.01
60 127 0.18
61 291 0.42
62 7 0.01
ACGTcount: A:0.25, C:0.29, G:0.21, T:0.25
Consensus pattern (60 bp):
TTTTCCAGTCCTCAAAGAGCAGGACGCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCA
Found at i:190152 original size:232 final size:231
Alignment explanation
Indices: 189664--190503 Score: 1130
Period size: 232 Copynumber: 3.6 Consensus size: 231
189654 TTCCACTTTT
* * * *
189664 CAGTCCTCAAAGAGCAGGATGCCTTTTCCTTTT-AAAGCCCACACAAGTTGGTGGCACATCCCAT
1 CAGTCCTCAAAGAGCAGGACGCC-TTTCCTTTTCAAAGCCCACACAAGTTGGTGGCACTTTCCAG
* * * * *
189728 TCCTCAAAGAGCAGGATGCCTTTTAAAGCCCACACAAGCTGGTGGCACTTTCAGTCCTCAAAGAG
65 TCCTCAAAGAGCAGGACGCCCTTCAAAGCCCACACAAGTTGGTGGCATTTTCAGTCCTCAAAGAG
* * * * **
189793 CAGGACACCTTCTCCTTTGCAAGCCCACATAAGCTGGTGGCACCTT-CAGTCCTCAAAGAGCAGG
130 CAGG--A----CGCCTTTGAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGG
* * * * **
189857 ACGCCTTTC-CTTTTCAAAGCCCACTCGAGTTGGTGGCATTTTC
189 ATG-CTTTCTCTTTGCAAAGCCCACACAAGTTGGTGGCACCTTC
* * * *
189900 CAGTCCTCAAGGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACAAGTTGCTGGCATTTTCTAGT
1 CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCACTTTCCAGT
189965 CCTCAAAGAGCAGGACGCCCTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAG
66 CCTCAAAGAGCAGGACGCCCTTCAAAGCCCACACAAGTTGGTGGCATTTT-CAGTCCTCAAAGAG
*
190030 CAGGACGCCTTTGAAAGCTCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATGCTT
130 CAGGACGCCTTTGAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATGCTT
190095 TCTCTTTGCAAAGCCCACACAAGTTGGTGGCACCTTC
195 TCTCTTTGCAAAGCCCACACAAGTTGGTGGCACCTTC
* * *
190132 CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACGAGTTGGTGACATTTTCCAGT
1 CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCACTTTCCAGT
* * *
190197 CCTCAAAGAGCAGGACTCCTTTCAAAGCCCACACCAGTTGGTGGCATTTTCCAGTCCTCAAAGAG
66 CCTCAAAGAGCAGGACGCCCTTCAAAGCCCACACAAGTTGGTGGCATTTT-CAGTCCTCAAAGAG
* *
190262 CAGGACGTCTTTCAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATGCTT
130 CAGGACGCCTTTGAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATGCTT
190327 TCTCTTTGCAAAGCCCACACAAGTT-GTGGCACCTTC
195 TCTCTTTGCAAAGCCCACACAAGTTGGTGGCACCTTC
* * *
190363 CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTGCAAAGCCCACACAAGTTGGTCGCACCTTCCAGT
1 CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCACTTTCCAGT
* ** *
190428 CCTCAAAAAGCAGGACGCCTTTCCTTTTCAAAGCCCACATGAGTTGGTGGCACTTTTTAGTCCTC
66 CCTCAAAGAGCAGGACG-C---CC--TTCAAAGCCCACACAAGTTGGTGGCA-TTTTCAGTCCTC
190493 AAAGAGCAGGA
124 AAAGAGCAGGA
190504 TGCACTTTAT
Statistics
Matches: 544, Mismatches: 49, Indels: 21
0.89 0.08 0.03
Matches are distributed among these distances:
231 118 0.22
232 259 0.48
235 11 0.02
236 92 0.17
237 60 0.11
238 4 0.01
ACGTcount: A:0.25, C:0.30, G:0.21, T:0.24
Consensus pattern (231 bp):
CAGTCCTCAAAGAGCAGGACGCCTTTCCTTTTCAAAGCCCACACAAGTTGGTGGCACTTTCCAGT
CCTCAAAGAGCAGGACGCCCTTCAAAGCCCACACAAGTTGGTGGCATTTTCAGTCCTCAAAGAGC
AGGACGCCTTTGAAAGCCCACACAAGTTGGTGGCATTTTCCAGTCCTCAAAGAGCAGGATGCTTT
CTCTTTGCAAAGCCCACACAAGTTGGTGGCACCTTC
Found at i:191154 original size:16 final size:16
Alignment explanation
Indices: 191111--191154 Score: 60
Period size: 14 Copynumber: 3.0 Consensus size: 16
191101 AAAAGGAAAA
191111 AAAAAAATA-ATAA-T
1 AAAAAAATATATAATT
191125 AAAAAAAT-TA-AATT
1 AAAAAAATATATAATT
191139 AAAAAAATATATAATT
1 AAAAAAATATATAATT
191155 TTGTCCAAAT
Statistics
Matches: 26, Mismatches: 0, Indels: 6
0.81 0.00 0.19
Matches are distributed among these distances:
13 2 0.08
14 18 0.69
15 2 0.08
16 4 0.15
ACGTcount: A:0.73, C:0.00, G:0.00, T:0.27
Consensus pattern (16 bp):
AAAAAAATATATAATT
Found at i:191280 original size:19 final size:18
Alignment explanation
Indices: 191256--191350 Score: 84
Period size: 19 Copynumber: 5.7 Consensus size: 18
191246 AAACTGTAAA
191256 TGTATCGATACATAAGTGT
1 TGTATCGATACATAAGT-T
191275 TGTATCGATAC---A--T
1 TGTATCGATACATAAGTT
191288 TGTATCGATACATAAGTGT
1 TGTATCGATACATAAGT-T
191307 TGTATCGATAC---A--T
1 TGTATCGATACATAAGTT
*
191320 TGTATCGATACATATGTTT
1 TGTATCGATACATAAG-TT
191339 TGTATCGATACA
1 TGTATCGATACA
191351 ATGTATCGCT
Statistics
Matches: 63, Mismatches: 1, Indels: 24
0.72 0.01 0.27
Matches are distributed among these distances:
13 24 0.38
16 3 0.05
19 36 0.57
ACGTcount: A:0.31, C:0.13, G:0.18, T:0.39
Consensus pattern (18 bp):
TGTATCGATACATAAGTT
Found at i:191292 original size:13 final size:13
Alignment explanation
Indices: 191274--191332 Score: 64
Period size: 13 Copynumber: 4.1 Consensus size: 13
191264 TACATAAGTG
191274 TTGTATCGATACA
1 TTGTATCGATACA
191287 TTGTATCGATACATAA
1 TTGTATCGATAC---A
191303 GTGTTGTATCGATACA
1 ---TTGTATCGATACA
191319 TTGTATCGATACA
1 TTGTATCGATACA
191332 T
1 T
191333 ATGTTTTGTA
Statistics
Matches: 40, Mismatches: 0, Indels: 12
0.77 0.00 0.23
Matches are distributed among these distances:
13 26 0.65
16 2 0.05
19 12 0.30
ACGTcount: A:0.31, C:0.14, G:0.17, T:0.39
Consensus pattern (13 bp):
TTGTATCGATACA
Found at i:191297 original size:32 final size:32
Alignment explanation
Indices: 191256--191358 Score: 179
Period size: 32 Copynumber: 3.2 Consensus size: 32
191246 AAACTGTAAA
191256 TGTATCGATACATAAGTGTTGTATCGATACAT
1 TGTATCGATACATAAGTGTTGTATCGATACAT
191288 TGTATCGATACATAAGTGTTGTATCGATACAT
1 TGTATCGATACATAAGTGTTGTATCGATACAT
* * *
191320 TGTATCGATACATATGTTTTGTATCGATACAA
1 TGTATCGATACATAAGTGTTGTATCGATACAT
191352 TGTATCG
1 TGTATCG
191359 CTACGAAGCT
Statistics
Matches: 68, Mismatches: 3, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
32 68 1.00
ACGTcount: A:0.30, C:0.13, G:0.18, T:0.39
Consensus pattern (32 bp):
TGTATCGATACATAAGTGTTGTATCGATACAT
Done.