Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2458
Parameters: 2 7 7 80 10 50 1000
Length:  101580

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
307--341
6
5.8
6
100
0
70
31
34
17
17
1.93
287--341
18
3.1
17
85
12
67
29
32
20
18
1.96
12069--12115
2
23.5
2
100
0
94
51
0
0
48
1.00
12783--12809
2
13.5
2
100
0
54
48
0
0
51
1.00
15409--15440
2
16.0
2
100
0
64
50
0
0
50
1.00
15906--15935
2
15.0
2
100
0
60
0
50
0
50
1.00
21078--21252
88
2.0
88
100
0
350
31
12
17
38
1.87
26970--27076
50
2.1
50
96
0
196
24
18
26
30
1.98
33593--33672
40
2.0
40
92
0
133
37
26
5
31
1.78
34623--34669
2
23.5
2
100
0
94
0
51
0
48
1.00
43155--43188
2
17.5
2
87
6
52
47
2
0
50
1.16
45727--45769
3
14.3
3
100
0
86
65
0
0
34
0.93
47327--47407
23
3.5
23
78
9
92
49
6
1
43
1.35
47337--47408
22
3.0
25
78
12
78
50
6
1
41
1.38
47332--47457
47
2.7
47
82
7
141
47
11
1
39
1.49
47778--47816
3
13.0
3
100
0
78
66
0
33
0
0.92
48616--48643
11
2.5
11
100
0
56
46
39
0
14
1.44
53727--53752
2
13.0
2
100
0
52
50
0
0
50
1.00
61543--61571
2
14.5
2
100
0
58
48
0
0
51
1.00
62217--62256
20
2.0
21
85
14
57
25
0
7
67
1.16
63673--63724
17
3.2
17
82
15
58
65
0
0
34
0.93
68844--68891
18
2.5
18
86
10
60
70
0
0
29
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68858--68892
18
1.9
18
100
0
70
71
0
0
28
0.86
72542--72570
2
14.5
2
100
0
58
51
0
48
0
1.00
73011--73050
21
1.9
21
100
0
80
50
5
2
42
1.37
75012--75036
3
8.3
3
100
0
50
68
0
0
32
0.90
79284--79468
34
5.5
34
87
3
257
40
26
7
25
1.82
83534--83596
19
3.3
19
90
0
90
34
19
17
28
1.94
83901--84083
34
5.4
34
86
3
244
40
26
7
25
1.81
88817--88851
2
17.5
2
93
0
52
48
5
45
0
1.26
89110--89317
117
1.8
115
87
3
310
43
7
16
32
1.76
89947--89996
23
2.2
23
82
13
59
30
2
2
66
1.14
90490--90516
5
5.4
5
100
0
54
22
18
37
22
1.95
95780--95828
2
24.5
2
95
0
89
0
51
0
48
1.00

Tables:   1

The End!