Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2465
Parameters: 2 7 7 80 10 50 1000
Length:  28172

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1111--1159
20
2.5
20
80
12
64
40
0
0
59
0.98
1625--1659
17
2.1
17
88
0
52
40
0
0
60
0.97
1878--1903
3
8.7
3
100
0
52
34
0
0
65
0.93
3280--3306
2
13.5
2
100
0
54
51
0
0
48
1.00
4761--4797
2
18.5
2
100
0
74
48
0
0
51
1.00
5014--5050
2
18.5
2
100
0
74
51
0
0
48
1.00
5870--5909
17
2.3
18
87
12
57
42
0
0
57
0.98
5872--5909
18
2.1
18
85
9
51
39
0
0
60
0.97
5886--5928
12
3.5
12
76
17
52
41
0
0
58
0.98
6208--6294
31
2.8
31
85
1
95
37
4
3
54
1.38
6201--6270
30
2.2
32
82
7
90
38
1
2
57
1.23
6231--6306
31
2.5
31
85
6
93
42
9
2
46
1.50
6278--6498
72
3.0
73
85
5
304
47
6
1
44
1.38
6390--6430
16
2.5
17
88
8
66
48
0
0
51
1.00
9670--9717
18
2.8
16
81
9
51
64
0
2
33
1.05
9689--9720
11
2.9
11
90
0
55
59
0
0
40
0.97
9674--9720
22
2.1
23
88
4
69
59
0
2
38
1.09
10132--10156
2
12.5
2
100
0
50
52
0
0
48
1.00
10611--10667
21
2.7
20
76
10
60
61
0
0
38
0.96
11196--11234
3
13.0
3
94
0
69
64
0
2
33
1.08
17273--17313
21
2.0
20
90
4
64
70
0
0
29
0.87
17273--17313
20
2.1
19
86
9
55
70
0
0
29
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17276--17324
21
2.3
22
75
10
57
65
0
0
34
0.93
17522--17579
29
2.0
29
96
0
107
44
6
15
32
1.73
18264--18293
2
15.0
2
100
0
60
50
0
0
50
1.00
22037--22065
2
14.5
2
100
0
58
0
48
0
51
1.00
22951--22982
2
16.0
2
100
0
64
50
0
0
50
1.00
24580--24615
3
13.0
3
88
11
51
69
0
0
30
0.89
24579--24614
18
1.9
19
94
5
65
72
0
0
27
0.85
25713--25750
20
1.9
20
88
0
58
55
15
13
15
1.70
26746--26776
16
2.0
15
93
6
53
35
0
0
64
0.94

Tables:   1

The End!