Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2468
Parameters: 2 7 7 80 10 50 1000
Length:  36513

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4369--4410
21
2.0
22
95
4
77
38
0
28
33
1.58
4493--4557
27
2.4
27
94
0
112
35
6
23
35
1.80
5100--5124
13
1.9
13
100
0
50
32
16
16
36
1.90
6649--6700
2
27.0
2
79
14
56
48
3
1
46
1.31
6769--6839
8
8.6
8
76
11
72
78
0
18
2
0.86
6771--6835
4
16.8
4
74
6
62
76
0
20
3
0.91
6771--6838
23
2.8
23
81
14
91
77
0
19
2
0.89
7292--7354
15
4.5
14
76
18
60
79
0
19
1
0.82
7292--7354
29
2.2
28
86
10
85
79
0
19
1
0.82
7293--7353
8
7.9
7
77
22
52
78
0
19
1
0.83
7292--7354
27
2.3
27
83
10
74
79
0
19
1
0.82
6775--8230
509
2.9
508
84
8
1761
36
7
9
46
1.64
7812--7862
15
3.3
15
81
10
59
76
0
21
1
0.88
8456--8503
23
2.0
24
88
4
71
16
4
12
66
1.39
8495--8992
255
2.0
255
100
0
996
31
8
9
49
1.66
8926--9040
38
2.9
39
96
3
214
41
2
7
47
1.46
9161--9221
24
2.4
26
79
17
74
27
3
4
63
1.30
9302--9354
16
3.3
16
79
10
63
47
0
0
52
1.00
10975--11021
20
2.3
20
86
10
69
55
2
0
42
1.12
15956--16000
21
2.2
21
88
11
67
57
0
17
24
1.40
20056--20094
2
19.5
2
100
0
78
48
0
0
51
1.00
27408--27450
21
2.0
22
86
13
63
44
0
0
55
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27420--27477
15
3.7
16
77
11
66
41
0
1
56
1.09
27410--27475
32
2.1
33
83
13
95
40
0
1
57
1.08
27998--28048
25
2.0
25
100
0
102
27
7
41
23
1.82
28884--28932
14
3.3
15
75
25
50
36
0
4
59
1.17
32577--32614
8
4.8
8
84
12
51
84
0
15
0
0.63
32574--32611
20
1.9
20
89
10
60
84
0
15
0
0.63
34197--34230
18
1.9
18
94
5
61
52
5
2
38
1.41
34968--35018
15
3.4
15
76
23
54
35
0
5
58
1.22

Tables:   1

The End!