Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2470
Parameters: 2 7 7 80 10 50 1000
Length:  12782

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
345--382
17
2.2
17
86
9
51
52
0
0
47
1.00
1764--1804
20
2.0
22
90
9
68
53
2
0
43
1.13
2269--2315
17
2.9
16
78
12
51
44
0
0
55
0.99
4884--4939
27
2.0
27
89
3
85
46
0
0
53
1.00
7760--7784
1
25.0
1
100
0
50
100
0
0
0
0.00
8145--8183
2
20.0
2
84
5
53
43
0
56
0
0.99
8147--8183
19
1.9
19
88
0
56
43
0
56
0
0.99
8386--8433
20
2.5
19
79
3
60
25
0
4
70
1.04
11713--11762
26
1.9
26
88
8
75
40
0
0
60
0.97
12046--12181
19
7.2
19
71
19
63
70
2
0
25
1.06
12055--12192
28
4.8
29
71
14
99
70
2
0
26
1.06
12079--12121
23
1.9
23
90
4
70
74
2
0
23
0.93
12171--12243
25
2.9
26
76
10
71
65
0
2
31
1.06
12235--12294
28
2.1
28
87
0
84
63
5
0
31
1.16
12287--12325
13
2.9
13
92
3
60
35
5
0
58
1.20
12295--12348
27
1.9
27
81
7
63
31
3
1
62
1.23
12363--12400
8
4.3
9
84
15
53
34
0
2
63
1.09
12370--12412
18
2.5
17
82
10
52
32
2
4
60
1.30

Tables:   1

The End!