Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2474
Parameters: 2 7 7 80 10 50 1000
Length:  37469

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160--191
15
2.0
17
88
11
50
56
18
3
21
1.56
703--731
11
2.5
12
94
5
51
44
0
0
55
0.99
813--855
18
2.4
18
80
11
52
62
2
0
34
1.08
817--856
17
2.3
18
86
4
55
60
2
0
37
1.11
3590--3628
19
2.1
19
90
9
62
46
0
0
53
1.00
4201--4232
16
2.0
16
93
0
55
31
0
3
65
1.08
4341--4381
18
2.1
21
86
13
61
58
0
0
41
0.98
4339--4389
20
2.5
21
81
18
63
56
0
0
43
0.99
4373--4405
10
2.9
12
86
13
52
42
0
3
54
1.15
4429--4473
17
2.8
16
76
6
54
35
2
0
62
1.08
4401--4468
17
4.4
16
74
10
70
36
1
0
61
1.05
4829--4856
4
7.0
4
100
0
56
25
0
0
75
0.81
5232--5449
34
6.5
33
82
8
260
40
26
7
25
1.82
5232--5449
68
3.2
67
85
3
294
40
26
7
25
1.82
5231--5449
102
2.2
102
91
0
350
40
26
7
25
1.82
8082--8423
171
2.0
171
99
0
675
24
25
17
31
1.97
10016--10231
34
6.4
33
73
12
170
40
23
7
28
1.82
10016--10231
68
3.2
68
79
2
229
40
23
7
28
1.82
10014--10231
102
2.1
101
82
3
267
40
23
7
27
1.82
11007--11786
404
1.9
404
99
0
1544
37
17
22
23
1.94
14314--14363
8
6.2
8
76
15
50
72
0
2
26
0.96
14691--14811
38
3.2
37
81
6
154
51
14
7
26
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14691--14812
37
3.2
37
83
12
142
50
14
8
26
1.71
15223--15247
2
12.5
2
100
0
50
52
0
0
48
1.00
15462--15500
2
19.5
2
100
0
78
48
0
0
51
1.00
16995--17036
22
1.9
22
90
9
68
35
0
0
64
0.94
17030--17083
17
3.1
18
74
12
51
55
0
0
44
0.99
18796--18822
14
1.9
14
100
0
54
0
14
0
85
0.61
20554--20607
23
2.3
24
83
3
65
50
0
0
50
1.00
20553--20626
22
3.2
24
79
5
82
50
0
0
50
1.00
21963--21999
19
2.1
19
85
10
51
32
5
0
62
1.18
21994--22032
19
2.0
20
90
5
62
48
0
0
51
1.00
22713--22751
16
2.4
16
82
0
51
38
0
0
61
0.96
23314--23357
23
1.9
23
86
9
63
45
0
0
54
0.99
23314--23365
24
2.2
24
83
10
63
46
0
0
53
1.00
24982--25056
20
3.7
20
74
13
55
34
1
0
64
1.02
26529--26612
32
2.8
30
76
15
84
48
0
4
46
1.23
28932--29010
27
2.9
27
76
1
95
41
22
11
24
1.86
35261--35285
12
2.1
12
100
0
50
32
0
0
68
0.90
35224--35291
20
3.2
20
72
13
57
38
2
0
58
1.13
35574--35625
16
3.2
17
81
15
65
44
0
0
55
0.99
35598--35622
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!