Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2475
Parameters: 2 7 7 80 10 50 1000
Length:  146292

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
812--21750
476
44.0
475
90
1
30142
30
18
14
35
1.92
9823--16683
159
43.2
157
63
13
480
30
18
14
35
1.92
17431--18102
159
4.2
158
66
14
410
31
18
16
33
1.93
21362--22136
387
2.0
387
96
0
1424
30
17
15
35
1.92
20892--22613
863
2.0
861
89
1
2617
30
18
15
35
1.92
21753--146205
476
260.6
476
86
3
156836
30
18
15
35
1.92
39515--40179
159
4.2
158
66
13
392
30
18
14
36
1.91
54115--54752
158
4.0
158
63
11
336
31
16
14
37
1.89
58875--59512
158
4.0
158
63
11
336
31
16
14
37
1.89
67443--68080
158
4.0
158
63
11
345
31
16
15
37
1.89
70285--76636
159
40.1
157
63
14
574
31
18
15
35
1.91
86005--86642
158
4.0
158
64
11
345
31
16
14
37
1.89
85487--88513
159
19.1
158
64
13
458
31
18
15
35
1.92
122735--122810
12
6.9
11
75
15
52
39
2
48
9
1.49
122734--122819
24
3.8
24
72
17
85
41
2
45
10
1.51
122725--122843
42
2.8
42
92
0
193
42
2
46
8
1.47
135975--136669
159
4.4
157
64
11
331
32
17
14
35
1.91
139337--144255
159
31.1
156
63
14
521
31
18
14
35
1.91

Tables:   1

The End!