Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2476
Parameters: 2 7 7 80 10 50 1000
Length:  125461

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--64901
328
198.0
328
91
2
100664
29
18
24
27
1.98
64901--104788
331
120.9
331
97
0
73204
29
18
24
27
1.98
64901--125461
993
60.6
993
87
5
79727
29
18
24
27
1.98
75512--75548
18
2.1
18
94
0
65
18
5
0
75
0.99
104689--104888
100
2.0
100
90
1
312
30
18
30
21
1.97
104789--107835
328
9.3
328
92
1
4838
29
18
24
27
1.98
107736--107935
100
2.0
100
93
1
339
31
18
29
21
1.97
108168--108356
100
1.9
100
94
2
335
31
17
30
20
1.96
108265--109667
327
4.3
328
90
3
2247
29
19
24
27
1.98
109568--109767
100
2.0
100
93
1
339
30
19
29
21
1.97
109996--110195
100
2.0
100
91
1
321
31
20
28
20
1.97
110096--115178
328
15.5
328
89
0
7680
30
18
23
27
1.98
110096--125461
656
23.1
655
81
7
15889
29
18
23
28
1.98
114938--115421
241
2.0
243
90
2
760
31
19
26
22
1.98
115179--125461
328
31.4
328
90
1
15728
29
18
23
28
1.98
115179--125461
655
15.7
656
91
1
15743
29
18
23
28
1.98

Tables:   1

The End!