Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2481
Parameters: 2 7 7 80 10 50 1000
Length:  56766

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2395--2437
15
2.8
16
79
10
54
27
2
6
62
1.33
2731--2776
24
1.9
24
83
16
60
52
6
2
39
1.40
3403--3442
16
2.5
17
80
15
50
47
2
5
45
1.38
3525--3564
15
2.7
15
88
0
53
60
5
5
30
1.40
5696--6544
418
2.0
425
92
4
1427
40
6
11
41
1.66
7123--7165
21
2.0
21
100
0
86
46
13
9
30
1.75
8730--8767
2
19.0
2
88
0
58
47
47
2
2
1.30
9986--10019
17
1.9
18
88
5
52
52
0
0
47
1.00
10351--10403
19
2.8
20
78
16
58
56
0
7
35
1.28
11772--11835
32
2.0
32
84
6
85
53
0
3
43
1.16
11907--11945
20
2.0
20
85
5
53
23
0
15
61
1.33
14331--14404
25
2.9
25
72
9
78
43
1
0
55
1.08
14330--14409
24
3.2
24
68
15
63
46
1
0
52
1.08
16226--16264
20
2.0
20
84
0
51
48
0
0
51
1.00
16314--16351
6
6.2
6
87
6
58
31
0
0
68
0.90
16285--16351
25
2.8
24
86
11
84
35
0
1
62
1.04
16304--16359
19
2.8
19
89
10
78
32
0
0
67
0.91
16344--16385
12
3.6
12
83
6
50
19
0
4
76
0.96
17701--17802
51
2.0
51
100
0
204
35
9
19
35
1.85
19346--19395
21
2.4
22
80
6
59
36
0
2
62
1.07
19365--19417
27
2.0
27
81
7
63
41
1
0
56
1.10
20472--20497
2
13.0
2
100
0
52
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27773--27843
27
2.6
27
90
0
106
26
5
21
46
1.73
27798--27860
27
2.5
25
84
7
74
26
7
20
44
1.79
32336--32407
27
2.7
27
88
0
99
25
6
22
45
1.77
32499--32532
13
2.6
13
90
0
50
8
35
5
50
1.58
33202--33260
25
2.4
25
94
0
109
27
8
0
64
1.22
36559--36598
20
2.0
20
95
0
71
22
10
12
55
1.67
38211--38257
16
2.8
17
78
12
60
38
0
8
53
1.32
40780--40876
47
2.1
47
86
7
135
45
9
6
39
1.61
44940--45231
155
1.9
154
81
5
358
27
14
18
39
1.90
45623--45675
20
2.7
20
96
0
97
43
3
20
32
1.70

Tables:   1

The End!