Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2488
Parameters: 2 7 7 80 10 50 1000
Length:  42700

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4461--4499
13
3.0
13
92
0
60
30
10
15
43
1.80
4608--4648
21
1.9
21
85
5
55
26
19
0
53
1.45
6894--6918
13
1.9
13
100
0
50
36
16
16
32
1.90
6903--6959
19
2.9
21
80
15
77
33
15
15
35
1.90
6902--6958
20
2.9
21
82
12
77
33
15
14
36
1.88
7005--7034
13
2.3
13
100
0
60
33
16
13
36
1.88
6988--7056
33
2.1
32
84
10
86
28
13
20
37
1.90
7796--7852
13
3.9
13
76
24
60
35
14
17
33
1.90
7776--7873
32
3.0
32
96
1
178
34
12
17
35
1.87
7774--7871
19
5.8
18
71
28
90
33
12
17
36
1.87
7914--7938
13
1.9
13
100
0
50
32
16
16
36
1.90
7947--8023
33
2.4
33
95
2
138
31
19
22
27
1.98
11546--11587
17
2.5
17
76
3
50
57
19
2
21
1.52
17165--17205
18
2.4
17
84
8
55
26
4
0
68
1.10
19427--19462
8
4.2
8
86
13
54
36
0
0
63
0.94
19435--19485
18
3.0
16
83
13
50
33
0
0
66
0.92
19425--19487
13
4.9
14
75
19
57
33
0
0
66
0.92
21699--21739
15
2.9
14
85
7
55
68
2
2
26
1.15
22192--22249
21
2.8
21
82
10
66
36
13
5
44
1.66
22834--22859
13
2.0
13
100
0
52
38
15
15
30
1.88
22816--22879
32
2.0
33
87
3
94
40
17
14
28
1.88
28527--28569
21
2.0
21
95
0
77
30
16
18
34
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32619--32664
21
2.2
20
84
7
56
43
6
2
47
1.41
34969--35011
21
2.0
21
86
0
59
32
25
4
37
1.77
38349--38408
21
2.9
21
85
5
77
33
25
5
36
1.78
41954--42028
20
3.8
20
80
0
87
30
12
14
42
1.82

Tables:   1

The End!