Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2489
Parameters: 2 7 7 80 10 50 1000
Length:  32167

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1794--1818
13
1.9
13
100
0
50
36
16
16
32
1.90
1774--1839
32
2.0
33
88
2
98
34
12
13
39
1.82
1880--1904
13
1.9
13
100
0
50
32
16
16
36
1.90
1913--2036
52
2.4
52
93
4
207
34
18
17
29
1.94
9467--9522
22
2.5
22
82
5
60
1
19
0
78
0.84
9480--9524
11
4.1
11
91
0
72
0
17
0
82
0.68
11385--11433
20
2.4
21
86
3
64
40
8
24
26
1.83
14662--14724
3
20.7
3
74
20
51
0
28
4
66
1.12
14641--14720
33
2.4
34
79
6
92
5
25
5
65
1.34
14662--14724
7
10.3
6
75
21
51
0
28
4
66
1.12
16984--17037
20
2.7
20
91
0
81
29
14
18
37
1.91
19250--19292
21
2.1
20
83
12
52
53
6
13
25
1.65
19250--19292
20
2.1
21
83
12
54
53
6
13
25
1.65
21579--21644
33
2.0
34
88
8
100
33
16
13
36
1.88
24233--24274
13
3.2
13
79
0
57
38
11
14
35
1.83
28810--28834
3
8.3
3
100
0
50
32
36
0
32
1.58
29755--29811
13
3.9
13
72
24
51
35
15
17
31
1.92
29737--29832
32
3.0
32
93
1
165
35
13
16
34
1.88
29737--29830
19
5.6
18
68
28
73
35
13
17
34
1.89
29873--29897
13
1.9
13
100
0
50
32
16
16
36
1.90
29886--30034
52
2.9
51
87
7
219
34
19
16
28
1.94

Tables:   1

The End!