Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2491
Parameters: 2 7 7 80 10 50 1000
Length:  25558

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1102--1166
20
2.9
23
76
19
66
56
0
0
43
0.99
1108--1162
21
2.6
21
78
18
60
60
0
0
40
0.97
1289--1327
19
1.9
19
85
10
51
51
0
0
48
1.00
1741--1791
2
25.5
2
77
15
52
47
3
1
47
1.32
1741--1791
19
2.5
20
84
6
59
47
3
1
47
1.32
3328--3357
12
2.5
12
94
0
51
26
0
6
66
1.16
4593--4620
2
14.0
2
100
0
56
50
0
0
50
1.00
5621--5647
14
1.9
14
100
0
54
59
3
7
29
1.42
6663--6708
21
2.2
21
88
7
67
41
17
0
41
1.49
6657--6709
21
2.4
22
79
17
65
39
16
0
43
1.49
6675--6717
20
2.1
21
82
4
52
41
20
0
37
1.53
7034--7064
7
4.4
7
100
0
62
58
0
29
12
1.35
7997--8056
11
5.3
12
75
16
58
38
0
0
61
0.96
7999--8065
21
3.2
21
75
20
52
40
0
0
59
0.97
8573--8612
13
3.2
13
89
3
55
67
0
0
32
0.91
8634--8672
20
1.9
21
89
5
62
51
2
7
38
1.44
9809--9850
21
2.0
20
82
13
50
61
2
0
35
1.09
10074--10137
2
32.0
2
79
6
58
48
7
1
42
1.41
10065--10137
38
1.9
38
97
0
137
45
12
2
39
1.56
19773--19820
23
2.1
23
84
0
60
56
2
0
41
1.11
20247--20287
3
13.7
3
100
0
82
34
0
0
65
0.93
20979--21011
16
2.0
17
88
5
50
48
0
9
42
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21022--21085
33
1.9
33
84
6
85
40
0
0
59
0.97

Tables:   1

The End!