Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2493
Parameters: 2 7 7 80 10 50 1000
Length:  65605

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3139--3342
89
2.3
91
80
8
231
28
25
12
33
1.92
3317--3518
108
1.9
107
81
7
248
32
19
7
39
1.81
13839--13897
1
59.0
1
86
0
82
0
1
5
93
0.41
13839--13897
23
2.7
22
89
5
93
0
1
5
93
0.41
13839--13897
28
2.2
26
93
6
100
0
1
5
93
0.41
16356--16409
1
54.0
1
81
0
54
88
5
5
0
0.61
16356--16409
15
3.6
15
82
0
72
88
5
5
0
0.61
22399--24381
991
2.0
991
99
0
3903
28
15
22
33
1.95
25911--25987
1
77.0
1
78
0
73
88
5
6
0
0.64
25912--25986
27
2.8
27
83
2
98
88
5
6
0
0.65
25912--25987
32
2.3
33
88
8
120
88
5
6
0
0.64
28149--28225
1
77.0
1
89
0
109
93
2
3
0
0.41
28150--28225
33
2.3
33
93
0
125
93
2
3
0
0.41
30307--30363
1
57.0
1
78
0
51
0
7
5
87
0.66
30309--30365
29
2.0
29
96
3
107
0
10
5
84
0.77
30310--30363
22
2.5
22
80
14
60
0
7
5
87
0.68
33040--33100
1
61.0
1
80
0
59
0
6
4
88
0.63
33042--33102
31
2.0
31
96
3
115
0
9
4
85
0.74
35781--35869
1
89.0
1
79
0
79
0
7
4
87
0.66
35781--35863
15
5.6
14
77
22
89
0
7
4
87
0.65
35780--35869
20
4.3
20
78
13
92
0
8
4
86
0.69
35792--35871
28
3.0
27
87
3
117
0
11
3
85
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35780--35869
36
2.5
35
82
5
99
0
8
4
86
0.69
42991--43690
349
2.0
349
99
0
1373
38
19
11
31
1.86
44366--44435
1
70.0
1
85
0
86
0
4
4
91
0.51
44368--44435
30
2.3
30
89
5
102
0
4
4
91
0.52
62659--62740
1
82.0
1
75
0
56
0
8
6
85
0.74
62659--62734
30
2.5
31
91
8
131
0
7
6
85
0.74

Tables:   1

The End!