Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2496
Parameters: 2 7 7 80 10 50 1000
Length:  16383

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162--199
19
1.9
20
89
10
60
36
0
0
63
0.95
1517--1552
3
12.0
3
100
0
72
33
0
0
66
0.92
1692--1730
15
2.6
15
80
15
53
71
0
5
23
1.05
2029--2093
23
3.0
22
72
17
71
66
3
4
26
1.26
2127--2166
20
2.0
20
90
9
64
50
2
0
47
1.14
2439--2467
15
1.9
15
100
0
58
58
0
0
41
0.98
3374--3428
23
2.4
23
81
6
67
70
1
3
23
1.12
3392--3429
11
3.2
12
81
11
51
68
0
2
28
1.03
4014--4074
4
15.8
4
86
10
83
0
22
0
77
0.78
4404--4429
10
2.6
10
100
0
52
69
0
0
30
0.89
4379--4455
36
2.3
32
84
8
91
66
1
0
32
1.00
4474--4524
4
13.8
4
80
12
56
0
25
0
74
0.82
4475--4524
11
4.5
11
80
14
59
0
26
0
74
0.83
5133--5166
15
2.4
14
85
9
50
82
0
17
0
0.67
6324--6356
2
16.5
2
100
0
66
48
0
0
51
1.00
6774--6821
22
2.2
22
92
0
78
29
0
4
66
1.10
6781--6824
22
2.0
22
100
0
88
27
0
4
68
1.09
6829--6871
2
21.0
2
95
4
77
48
2
0
48
1.14
8115--8159
18
2.4
18
85
3
54
42
26
8
22
1.83
12385--12482
19
5.8
17
71
28
77
36
17
13
32
1.88
12404--12460
13
3.9
13
76
24
60
33
17
14
35
1.90
12383--12480
32
3.0
32
95
1
169
35
17
13
33
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15832--15861
15
1.9
16
93
6
53
40
0
13
46
1.43
15998--16083
37
2.3
37
87
0
118
25
22
19
32
1.97

Tables:   1

The End!