Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2502
Parameters: 2 7 7 80 10 50 1000
Length:  16138

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
392--462
20
3.5
20
80
3
72
39
11
14
35
1.81
1069--2184
29
38.6
28
79
12
1052
21
18
31
29
1.96
1908--1982
34
2.3
33
80
15
84
18
17
30
33
1.94
3396--3462
12
5.5
11
78
19
62
2
4
8
83
0.88
3396--3461
25
2.6
25
85
7
80
3
4
9
83
0.89
3422--3461
8
4.9
8
87
6
53
2
2
7
87
0.71
13215--13247
11
3.0
11
95
0
57
0
0
15
84
0.61
13216--13260
11
4.0
11
86
11
56
0
4
8
86
0.69
13228--13260
14
2.4
14
90
5
50
0
6
3
90
0.52
13216--13259
22
2.0
22
86
8
63
0
4
9
86
0.70
15481--15536
22
2.5
23
94
2
96
62
10
10
16
1.54

Tables:   1

The End!