Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2514
Parameters: 2 7 7 80 10 50 1000
Length:  32755

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
459--505
19
2.5
19
79
6
51
36
2
0
61
1.08
629--696
14
4.5
15
73
12
59
79
1
19
0
0.81
634--689
20
3.2
18
79
20
57
76
0
23
0
0.78
638--696
6
9.5
6
74
18
50
79
0
20
0
0.73
634--698
34
1.9
33
84
3
85
80
0
20
0
0.72
735--795
4
15.8
4
75
21
51
75
0
22
1
0.89
751--797
13
3.6
13
82
5
60
76
0
23
0
0.78
737--794
30
2.0
29
89
3
89
74
0
24
1
0.92
733--799
13
5.3
13
71
15
52
77
0
20
1
0.85
849--889
22
1.9
21
85
5
55
26
0
0
73
0.84
833--968
6
22.0
6
66
21
50
34
1
0
63
1.09
875--930
20
2.8
21
79
20
66
33
3
0
62
1.12
844--943
51
2.0
51
82
11
125
34
2
0
64
1.05
926--973
25
1.9
25
83
8
62
37
0
0
62
0.95
918--1010
46
2.0
48
80
6
109
39
1
2
56
1.18
1055--1108
26
2.0
27
85
3
74
31
5
0
62
1.18
1192--1268
33
2.3
32
78
6
82
74
2
23
0
0.95
1315--1409
35
2.7
35
80
9
86
33
2
3
61
1.24
1692--1718
13
2.1
13
100
0
54
92
0
7
0
0.38
1795--1827
12
2.8
12
90
4
50
39
3
0
57
1.14
2099--2131
16
2.0
17
94
5
59
72
0
0
27
0.85
2524--2558
17
2.0
18
88
5
54
34
5
0
60
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2511--2559
25
2.0
24
84
4
62
34
6
2
57
1.35
3099--3148
20
2.6
19
81
9
66
38
0
0
62
0.96
3099--3155
29
1.9
30
85
3
80
38
0
0
61
0.96
4377--4439
20
3.6
17
75
20
51
53
4
1
39
1.31
6485--6525
19
2.2
19
100
0
82
14
24
24
36
1.93
6668--6775
21
5.2
21
67
14
55
39
4
3
51
1.40
6731--6790
32
1.9
31
86
3
84
41
3
3
51
1.35
6838--6897
16
3.5
16
75
20
59
63
0
0
36
0.95
7001--7057
21
2.7
21
83
0
78
36
3
7
52
1.46
9583--9623
10
4.3
10
81
9
50
56
0
0
43
0.99
10373--10406
2
17.0
2
93
0
59
47
0
0
52
1.00
18332--18389
22
2.6
23
83
8
75
50
0
0
50
1.00
18326--18379
23
2.3
24
81
12
67
51
0
0
48
1.00
22120--22145
13
2.0
13
100
0
52
23
7
23
46
1.78
24274--24312
21
1.9
20
84
5
51
43
0
0
56
0.99
26251--26275
2
12.5
2
100
0
50
52
0
0
48
1.00
30251--30290
2
19.5
2
84
5
53
45
5
0
50
1.23

Tables:   1

The End!