Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2522
Parameters: 2 7 7 80 10 50 1000
Length:  26422

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4793--4860
26
2.7
25
77
4
75
38
2
0
58
1.13
10631--10695
3
23.0
3
76
14
59
66
0
0
33
0.92
10622--10780
40
3.9
39
82
14
171
61
0
0
37
1.01
10617--10778
13
12.6
13
67
24
60
61
0
0
37
1.01
10713--10770
20
3.1
20
72
20
54
60
0
0
39
0.97
10617--10791
79
2.2
79
76
16
175
61
0
0
38
1.01
10617--10791
60
2.9
61
68
24
138
61
0
0
38
1.01
10975--11021
3
15.7
3
100
0
94
68
0
0
31
0.90
14080--14142
32
2.0
31
90
6
101
33
0
1
65
1.03
14107--14152
22
2.1
22
88
11
69
36
0
0
63
0.95
14835--14868
15
2.2
16
89
5
52
29
0
0
70
0.87
15042--15094
28
1.9
27
81
11
63
52
3
1
41
1.30
15118--15142
2
12.5
2
100
0
50
48
0
0
52
1.00
15783--15915
35
3.8
34
71
16
101
36
0
0
62
1.06
15851--15916
11
6.4
11
72
22
54
33
0
0
66
0.92
15852--15914
5
12.4
5
74
15
58
33
0
0
66
0.92
15844--15916
27
2.9
24
80
11
92
35
0
0
64
0.94
16551--16598
20
2.5
20
83
10
55
54
6
2
37
1.38
17195--17241
24
1.9
25
82
4
60
40
0
2
57
1.11
17258--17297
20
2.0
21
95
5
73
45
2
0
52
1.14
17814--17856
15
2.8
16
79
10
54
51
0
0
48
1.00
18145--18184
20
2.0
21
95
5
73
47
2
0
50
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18655--18707
23
2.3
23
77
6
54
47
3
0
49
1.19
18665--18716
22
2.5
22
84
12
65
42
1
0
55
1.10
18746--18814
15
4.8
13
72
22
50
27
0
1
71
0.95
18751--18814
14
4.4
14
78
7
65
28
0
1
70
0.97
22846--22913
11
6.5
11
73
20
58
38
0
0
61
0.96
22846--22914
29
2.4
31
83
13
94
39
0
0
60
0.97
22857--22953
49
2.1
45
83
14
117
42
1
1
55
1.13
23365--23428
28
2.2
29
83
8
78
53
0
0
46
1.00
23425--23470
23
2.0
23
86
0
65
45
0
0
54
0.99
23744--23824
27
3.0
26
83
5
81
46
0
0
53
1.00
23796--23851
17
2.9
18
77
17
60
37
0
0
62
0.95
23788--23839
8
5.9
9
76
13
54
40
0
0
59
0.97
24350--24407
23
2.5
24
78
18
68
58
0
0
41
0.98
24345--24420
18
4.5
17
75
21
70
57
0
0
42
0.98
25106--25136
7
4.3
7
95
4
53
83
0
0
16
0.64
25098--25138
17
2.4
16
88
12
55
82
0
0
17
0.66
25106--25141
14
2.5
15
86
9
56
80
0
0
19
0.71

Tables:   1

The End!