Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2523
Parameters: 2 7 7 80 10 50 1000
Length:  47638

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7744--7793
25
2.0
25
100
0
100
40
4
16
40
1.67
15074--15101
14
2.0
14
100
0
56
28
0
0
71
0.86
15286--15318
13
2.5
13
95
0
57
48
0
12
39
1.40
19666--19712
16
2.9
17
78
18
55
70
2
0
27
0.99
19662--19712
15
3.2
16
84
15
63
68
1
0
29
1.00
19722--19785
11
5.7
11
74
15
60
60
0
0
39
0.97
19722--19792
29
2.6
27
82
13
90
60
0
0
39
0.97
25153--25187
11
3.1
11
91
4
52
54
0
5
40
1.24
25153--25186
12
2.9
12
91
4
52
52
0
5
41
1.25
26363--26442
18
4.0
21
74
19
64
40
1
0
58
1.06
26383--26442
19
3.2
18
80
15
68
38
0
0
61
0.96
26439--26481
17
2.4
19
80
7
54
51
4
0
44
1.22
26868--26921
24
2.2
25
83
9
76
42
0
0
57
0.98
27170--27224
18
3.3
17
80
16
62
56
1
1
40
1.21
27189--27245
30
1.9
30
85
7
80
54
1
0
43
1.10
37902--37951
25
2.0
25
100
0
100
40
16
4
40
1.67

Tables:   1

The End!