Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2524
Parameters: 2 7 7 80 10 50 1000
Length:  58560

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3048--3427
79
4.8
78
82
4
413
34
14
23
27
1.93
8379--8413
12
2.9
12
86
0
52
85
0
14
0
0.59
8563--8612
25
2.0
25
96
0
91
30
14
28
28
1.95
9134--9264
58
2.2
58
81
6
140
29
12
12
46
1.77
9296--9507
77
2.7
77
80
2
201
32
14
17
35
1.90
9376--9553
77
2.3
78
83
4
209
34
14
16
34
1.89
9324--9679
78
4.6
77
77
6
283
32
15
16
35
1.90
9639--9722
39
2.2
39
89
4
125
28
15
22
33
1.95
9639--9817
39
4.6
39
72
13
118
31
15
20
32
1.93
9581--9820
115
2.1
115
82
1
293
32
15
18
32
1.93
15402--15475
30
2.5
30
88
4
105
33
21
9
35
1.86
24738--24796
28
2.1
28
100
0
118
30
3
37
28
1.74
27997--28028
16
2.0
16
100
0
64
37
6
18
37
1.76
43319--43433
41
2.9
39
88
3
124
32
10
8
48
1.68
43335--43433
41
2.4
41
93
0
171
31
10
8
50
1.65
44599--44634
11
3.3
11
88
0
54
75
0
22
2
0.94
49469--49499
16
1.9
16
93
0
53
25
29
6
38
1.81
50014--50060
25
2.0
24
84
12
62
21
19
23
36
1.95
55153--55198
15
2.9
15
81
12
56
36
21
10
30
1.88
55484--55538
27
2.0
27
92
0
92
30
20
0
49
1.49

Tables:   1

The End!