Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2528
Parameters: 2 7 7 80 10 50 1000
Length:  28420

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1288--1331
19
2.3
19
100
0
88
40
13
15
29
1.86
3151--3178
13
2.2
13
100
0
56
53
14
7
25
1.66
5108--5550
65
6.8
65
77
6
398
44
12
23
19
1.85
5128--5550
129
3.3
128
76
6
422
44
12
23
19
1.85
7399--7423
13
1.9
13
100
0
50
32
16
16
36
1.90
7380--7443
33
1.9
33
87
12
96
32
18
15
32
1.93
7513--7539
13
2.1
13
100
0
54
40
14
14
29
1.86
7496--7558
33
1.9
32
87
9
92
41
15
15
26
1.88
8923--8961
20
2.0
20
84
0
51
28
2
0
69
1.02
9823--9861
21
1.9
20
89
5
60
0
20
2
76
0.90
9815--9868
20
2.8
19
76
13
56
3
20
1
74
1.07
13376--13448
20
3.7
19
87
7
85
28
15
17
38
1.90
13578--13615
20
2.0
20
89
5
60
34
15
10
39
1.82
14373--14404
4
7.8
4
96
3
55
71
0
3
25
1.00
14540--15000
163
2.8
165
80
5
499
49
8
10
31
1.68
26057--26150
20
4.7
20
89
3
145
38
10
14
36
1.81
26561--26615
19
2.8
20
78
10
69
40
14
12
32
1.84

Tables:   1

The End!