Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2542
Parameters: 2 7 7 80 10 50 1000
Length:  31230

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9369--13253
187
20.8
186
97
0
7206
33
21
16
28
1.95
13323--14769
152
9.5
152
94
1
2490
28
14
23
34
1.94
15391--16111
229
3.1
231
97
1
1365
33
19
15
31
1.92
16190--16363
56
3.1
56
67
21
164
33
23
12
29
1.92
15988--19479
388
9.0
388
99
0
6968
29
25
17
27
1.98
16578--16751
56
3.1
56
67
21
164
33
23
12
29
1.92
16966--17139
56
3.1
56
67
21
164
33
23
12
29
1.92
17354--17527
56
3.1
56
67
21
164
33
23
12
29
1.92
17742--17915
56
3.1
56
67
21
164
33
23
12
29
1.92
18130--18303
56
3.1
56
67
21
164
33
23
12
29
1.92
18518--18691
56
3.1
56
67
21
164
33
23
12
29
1.92
18906--19079
56
3.1
56
67
21
164
33
23
12
29
1.92
19275--19608
112
3.0
113
94
3
584
32
26
12
27
1.93
19294--19579
56
5.1
56
64
24
172
33
24
12
28
1.92
19607--19846
5
48.0
5
96
3
448
39
40
0
20
1.53
20438--20471
11
2.8
13
82
17
54
50
0
5
44
1.26
20380--21077
347
2.0
348
99
0
1380
30
19
20
29
1.97

Tables:   1

The End!