Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold2547
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 500834
ACGTcount: A:0.31, C:0.18, G:0.16, T:0.34
File 1 of 3
Found at i:4818 original size:475 final size:475
Alignment explanation
Indices: 3799--4821 Score: 1357
Period size: 475 Copynumber: 2.1 Consensus size: 475
3789 TCCTTAGTGT
* * * ** *
3799 GATAAATGACATTGACGATTTGGTCGT-ACAAGAAAGGGATTT-TTACTCACCATTTTTCATAGA
1 GATACATGACATTGACGCTTTGGT-GTCACAAGAAAAGCTTTTCTTTC-CACCATTTTT-ATAGA
* * *
3862 ATCAAAGTTTATCTCTTAAATAAGATAAACACGAATACTCATACTAATCCAAATTCTTTTTAAGA
63 ATCAAAGTTTATCTCTTAAATAAGACAAACAAGAATACACATACTAATCCAAATTCTTTTTAAGA
* * * * * * * *
3927 TTTGGCACCATAAACATAGTCTTCTCATTAGGATACATAATATTGCAGTTTTGTTTTCGCAAGAA
128 TTAGGCACCATAAACATAGTCTTATCATAAGGATACACAATATTGAAGCTTTGGTTTCACAAGAA
*
3992 AAGCATTTTTCCCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAAT
193 AAGCATTTTTCCCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAAGGAAT
* * *
4057 CGAGTAATTATCTTCATTCATTTTGTAATTAGGCACAACAAACACAATCTCCTCATTTGGTTAAA
258 CGAGTAATGATCTTCATTCATTTTCTAATTAGGCACAACAAACACAATCTCCTCATTTGGATAAA
* * * * * *
4122 TGATATTGATGATTTTGTTTTGCACGAAAATCTTTTCTTTGCCCTATTTTCTTTAAAATCAAAGT
323 TAATACTAATGATTTTCTTTTGCACGAAAAGCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGT
* * **
4187 TCATCCCTTAAATAAGAGAAGCGTAGATTCTTGTAACAGTCTCCATTCTTCTCAAGATTGGGAAC
388 TCATCCCTTAAATAAGACAAGCATAGATTCTCATAACAGTCTCCATTCTTCTCAAGATTGGGAAC
4252 CAAAAACACATTCCCGTCATTAG
453 CAAAAACACATTCCCGTCATTAG
*
4275 GATACATGACATTGACGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCA--ATGTTTTATACAAA
1 GATACATGACATTGACGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCAT-TTTTAT--AGA
* * * *
4338 ATCAAAGTTTGTCTCTTAAATAAGACAAATAAGAATACACATACTAATCCCCAA-TCTTTTTAGG
63 ATCAAAGTTTATCTCTTAAATAAGACAAACAAGAATACACATACTAAT-CCAAATTCTTTTTAAG
* *
4402 ATTAGGCACCATAAACATAGTCTTATTATAAGGATACACGATATT-AATGCTTTGGTTTCACAAG
127 ATTAGGCACCATAAACATAGTCTTATCATAAGGATACACAATATTGAA-GCTTTGGTTTCACAAG
* * *
4466 AGAAGC-TTTCTT-CCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGCGCCAAACAAGG
191 AAAAGCATTT-TTCCCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAAGG
* * * * * * *
4529 ATTCTAGTAATGATCTTCATTCATTTTCTGATTAGGCACTATAAACACATTCTCCTC-TTTATGA
255 AATCGAGTAATGATCTTCATTCATTTTCTAATTAGGCACAACAAACACAATCTCCTCATTT-GGA
*
4593 TAAATAATACTAATGATTTTCTTTTGCATTG-AAAGCTTTTCTTTGCCCTATTTTCCTTAAAATC
319 TAAATAATACTAATGATTTTCTTTTGCA-CGAAAAGCTTTTCTTTGCCCTATTTTCCTTAAAATC
* * *
4657 AAAGTTCATCCCTTAATTAATG-CAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATT
383 AAAGTTCATCCCTTAAATAA-GACAAGCATAGATTCTCATAACAGTCTCCATTCTTCTCAAGATT
* *
4721 GGGAACCAAAAGCACATTCCCTTCATTAG
447 GGGAACCAAAAACACATTCCCGTCATTAG
*
4750 GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
1 GATACATGACATTGACGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTT-ATAGAAT
4815 CAAAGTT
65 CAAAGTT
4822 CATCCCTCAA
Statistics
Matches: 477, Mismatches: 56, Indels: 29
0.85 0.10 0.05
Matches are distributed among these distances:
474 7 0.01
475 304 0.64
476 155 0.32
477 11 0.02
ACGTcount: A:0.33, C:0.19, G:0.13, T:0.35
Consensus pattern (475 bp):
GATACATGACATTGACGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTATAGAATC
AAAGTTTATCTCTTAAATAAGACAAACAAGAATACACATACTAATCCAAATTCTTTTTAAGATTA
GGCACCATAAACATAGTCTTATCATAAGGATACACAATATTGAAGCTTTGGTTTCACAAGAAAAG
CATTTTTCCCCCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAAGGAATCGA
GTAATGATCTTCATTCATTTTCTAATTAGGCACAACAAACACAATCTCCTCATTTGGATAAATAA
TACTAATGATTTTCTTTTGCACGAAAAGCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA
TCCCTTAAATAAGACAAGCATAGATTCTCATAACAGTCTCCATTCTTCTCAAGATTGGGAACCAA
AAACACATTCCCGTCATTAG
Found at i:6154 original size:474 final size:475
Alignment explanation
Indices: 5362--6360 Score: 1204
Period size: 475 Copynumber: 2.1 Consensus size: 475
5352 TCCTTAGTGT
* * * * * * * * *
5362 GATAAATGACATTGACGGTTTGGCCTTGCAAGAAAGAGATTTT-TTACCACCATTTTTCATAGAA
1 GATACATGACATTGATGCTTTGGCGTCGCAAGAAA-AGCTTTTCTTTCCAACATTTTTCACAGAA
* * * **
5426 TCAAAATTTTGTCTCTTAAATAAAATAAATATGAATACTCATACTAATCCCCATTCTTTTCAAGA
65 TCAAAAGTTTGTCTCTTAAATAAAACAAACAAAAATACTCATACTAATCCCCATTCTTTTCAAGA
* * * * * * * *
5491 TTTGGCACCATAAACATAGTCTTCTCATCAGGATACATAATATTGCAGTTTTGTTTTCGCAAGAA
130 TTAGGCACCATAAACATAGTCTTCTCATAAGGATACACAATACTGAAGCTTTGGTTTCGCAAAAA
* ** * *
5556 AAGCATTTTCCCCAAAATTTTTGTAAGGTCTAAGTTCGTGTCTCAAATGAGAAAAATATGGATTC
195 AAGCATTTTCCCC-AAAGTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGAAAAACATGGATTC
* * * * *
5621 TAGTAATTATCTTCATTCATTTTGTGATTAAGCACTATAAACACATTTTCTTATTAGGATAAAAG
259 TAGTAATGATCTTCATTCATTTTGTGAATAAGAACTATAAACACATTTCCCTATTAGGATAAAAG
* *
5686 ATACTGATGATTTTCTTTTACATGGAAATC-TTTTCTTTGCCCTATTTT-TTGTAAAATCAAAAT
324 ATACTAATGATTTTCTTTTACATGGAAATCTTTTTCTTTGCCCTATTTTCCT-TAAAATCAAAAT
* * * ** *
5749 TCATCCCTTAAATAAGAG-AAGTGTCGATTCTCGAAATAGTCTCCACACTTCTCAAGATTGGGAA
388 TCAACCCCTAAAGAAG-GTAAGCATCGATTCTCGAAACAGTCTCCACACTTCTCAAGATTGGGAA
*
5813 CCAAAAACACATTCAGTTCATTAG
452 CCAAAAACACATTCACTTCATTAG
5837 GATACATGACATTGATGCTTTGGCGTCGCAAGAAAAGCTTTTCTTTCCAACA-TTTTCTACAGAA
1 GATACATGACATTGATGCTTTGGCGTCGCAAGAAAAGCTTTTCTTTCCAACATTTTTC-ACAGAA
* * *
5901 TC-AAAGTTTGTCTCTTAAATAAGACAAACAAAAATACTCATACTAATCCCCATTCTTTTTAGGA
65 TCAAAAGTTTGTCTCTTAAATAAAACAAACAAAAATACTCATACTAATCCCCATTCTTTTCAAGA
*
5965 TTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATACTGAAGCTTTGGTTTCGCAAAAA
130 TTAGGCACCATAAACATAGTCTTCTCATAAGGATACACAATACTGAAGCTTTGGTTTCGCAAAAA
** * **
6030 AAGTTTTTTTCCCC-AAGTTTTGTAAACTCTAAGTTTGTGCCTCAAATGAGCTAAACATGGATTC
195 AAG-CATTTTCCCCAAAGTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGAAAAACATGGATTC
* * * *
6094 TATTAATGATCTTCATTCATTTTTTTAATAGGAACTATAAACACATTCTCCACT-TTAGGATAAA
259 TAGTAATGATCTTCATTCATTTTGTGAATAAGAACTATAAACACATT-TCC-CTATTAGGATAAA
* * * * *
6158 TGATACTAATGATTTTCTTTTGCATTGAAATCTTTTTTTTTGCCCTATTTTCCTTAAAATCAAAG
322 AGATACTAATGATTTTCTTTTACATGGAAATCTTTTTCTTTGCCCTATTTTCCTTAAAATCAAAA
* * **** *
6223 TTCAACCCCTAAAGAAGGTAAGCATTGATTCTCGTAACAGTCTCGTTTCTTTTCAAGATTGGGAA
387 TTCAACCCCTAAAGAAGGTAAGCATCGATTCTCGAAACAGTCTCCACACTTCTCAAGATTGGGAA
* * *
6288 CCAAAAGCACCTTCCCTTCATTAG
452 CCAAAAACACATTCACTTCATTAG
* * * * *
6312 GATACATGACATTAATGCTTTAGTGTCACCAGAAAAGCTTTTCTTTCCA
1 GATACATGACATTGATGCTTTGGCGTCGCAAGAAAAGCTTTTCTTTCCA
6361 CCGTTTCTGA
Statistics
Matches: 442, Mismatches: 74, Indels: 16
0.83 0.14 0.03
Matches are distributed among these distances:
473 82 0.19
474 165 0.37
475 194 0.44
476 1 0.00
ACGTcount: A:0.33, C:0.18, G:0.13, T:0.36
Consensus pattern (475 bp):
GATACATGACATTGATGCTTTGGCGTCGCAAGAAAAGCTTTTCTTTCCAACATTTTTCACAGAAT
CAAAAGTTTGTCTCTTAAATAAAACAAACAAAAATACTCATACTAATCCCCATTCTTTTCAAGAT
TAGGCACCATAAACATAGTCTTCTCATAAGGATACACAATACTGAAGCTTTGGTTTCGCAAAAAA
AGCATTTTCCCCAAAGTTTTGTAAACTCTAAGTTCGTGCCTCAAATGAGAAAAACATGGATTCTA
GTAATGATCTTCATTCATTTTGTGAATAAGAACTATAAACACATTTCCCTATTAGGATAAAAGAT
ACTAATGATTTTCTTTTACATGGAAATCTTTTTCTTTGCCCTATTTTCCTTAAAATCAAAATTCA
ACCCCTAAAGAAGGTAAGCATCGATTCTCGAAACAGTCTCCACACTTCTCAAGATTGGGAACCAA
AAACACATTCACTTCATTAG
Found at i:7994 original size:473 final size:469
Alignment explanation
Indices: 6975--8280 Score: 1717
Period size: 473 Copynumber: 2.8 Consensus size: 469
6965 TTTTTACCAC
* * * *
6975 CATTTTTTATAGAATCAAATTTTATCTCTTAAATAAAATAAACATGAATACTCATACTAATCCCC
1 CATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGA-CAACATGAATACTCATACTAATCCCC
* * * * *
7040 ATTCTTTTTAAGATTTGGCACCATAAACATAGTCTTCTCATTAGGATGCATAGTATTGTACTTTT
65 ATTCTTTTTAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACAGA-TATTATGC-TTT
* *
7105 GCTTTCGCAAGAAAAGCATTTTCCCTTCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
128 GGTTTCGCAAGAAAAGCATTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* * * * *
7170 AAAACATGGATTCTAGTAATTATCTTCATTCATTTTGTGATTAGGA-ACTATAAACACATTCTCC
193 CAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTA-GACACTATAAACAAATTCTCC
* * *
7234 TCATTAGGATAAAAGATATTGATAATTTTCTTTTGCATGGAAATTTCTTCTTTGCCCTATTTT-C
257 TCATTAGGACAAATGATGTTGATAATTTTCTTTTGCATGGAAATTT-TT-TTTGCCCTATTTTCC
* * **
7298 TATAAAATCAAAGTTTAT-CTCTTAAATAAGACAAGTGTCAATTCTCATAATAGTCTCCATTCTT
320 T-TTAAATCAAAGTTCATAC-CTTAAATAAGACAAGCATCAATTCTCATAATAGTCTCCATTCTT
*** *
7362 CCCGAGATTAGGAACCAAAAACACATTCCCCTTATTAGGATACATGACATTGATACTTTAGCATC
383 CAAAAGATTAGCAACCAAAAACACATTCCCCTTATTAGGATACATGACATTGATACTTTAGCATC
* * *
7427 GCCAGAAAAGCTTTTCTTTCCAA
448 ACAAAAAAAGCTTTTCTTTCC-A
* * * *
7450 CATTTTTTATTGAAACAAAGTTTGTCTCTTAAATAAGACTAACAAGAATACTCATACTAATCCCT
1 CATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGAC-AACATGAATACTCATACTAATCCCC
* * *
7515 ATTCTTTTTAGGATTAGGCACCATAAACATAGTCTTCCCATAAGGATACACGATATTAATGCTTT
65 ATTCTTTTTAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-GATATT-ATGCTTT
* *
7580 GGTTTCGCAAGAAAAGCATTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCATGTCTCAAATGAGA
128 GGTTTCGCAAGAAAAGCATTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
* *
7645 CAAACATAGATTCTACTAATGATCTTCACTCATTTTGTGATTAGACACTATAAACATA-TCATCC
193 CAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGACACTATAAACAAATTC-TCC
7709 TCATTAGGACAAATGATGTTGAT-ATTTTCTTTTGCATGGAAATCTTTTTTTGCCCTATTTTCCT
257 TCATTAGGACAAATGATGTTGATAATTTTCTTTTGCATGGAAAT-TTTTTTTGCCCTATTTTCCT
* *
7773 TTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCGATTCTCATAACT-GTCTCCATTCTTTA
321 TTAAATCAAAGTTCATACCTTAAATAAGACAAGCATCAATTCTCATAA-TAGTCTCCATTCTTCA
* * * **
7837 AAAGATT-GACAACCAAAAACACATTCCCTTTATTAGGATACATGACATTGATGCTTTGGTGTCA
385 AAAGATTAG-CAACCAAAAACACATTCCCCTTATTAGGATACATGACATTGATACTTTAGCATCA
7901 CAAAAAAAGCTTTTCTTTCCA
449 CAAAAAAAGCTTTTCTTTCCA
* * ** *
7922 CTATTTTTGATAGAATCAAAGTTTGTCTCTAAAATAAGACAGACATGAATACTCATAGGATTCCC
1 C-ATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACA-ACATGAATACTCATACTAATCCC
* * *
7987 CATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAAATGATATTGATGTTT
64 CATTCTTTTTAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA-GATATT-ATGCTT
* * * *
8052 TGGTTTCACAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAACTTCGTGCCTCAAATGA
127 TGGTTTCGCAAGAAAAGCA-TTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGA
* * *
8117 GACAAACATGGATTCTACTAAAGATCTACACTCATTTTGTGATTAGGCACTATAAACAAATTCTC
191 GACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGACACTATAAACAAATTCTC
* * * * **
8182 TTCATTACGACAAATGATGTTGATGATTTTCTTTTACATTAAAATTTTTTCATTGCCCTATTTTC
256 CTCATTAGGACAAATGATGTTGATAATTTTCTTTTGCATGGAAATTTTTT--TTGCCCTATTTTC
* *
8247 TTTTAAATCAAAGCTCATACCTTAAATAAGACAA
319 CTTTAAATCAAAGTTCATACCTTAAATAAGACAA
8281 ACGTGGATTC
Statistics
Matches: 732, Mismatches: 82, Indels: 33
0.86 0.10 0.04
Matches are distributed among these distances:
472 4 0.01
473 263 0.36
474 155 0.21
475 262 0.36
476 48 0.07
ACGTcount: A:0.33, C:0.19, G:0.12, T:0.36
Consensus pattern (469 bp):
CATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAACATGAATACTCATACTAATCCCCA
TTCTTTTTAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACAGATATTATGCTTTGGT
TTCGCAAGAAAAGCATTTTCCCTCCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAA
ACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGACACTATAAACAAATTCTCCTCAT
TAGGACAAATGATGTTGATAATTTTCTTTTGCATGGAAATTTTTTTTGCCCTATTTTCCTTTAAA
TCAAAGTTCATACCTTAAATAAGACAAGCATCAATTCTCATAATAGTCTCCATTCTTCAAAAGAT
TAGCAACCAAAAACACATTCCCCTTATTAGGATACATGACATTGATACTTTAGCATCACAAAAAA
AGCTTTTCTTTCCA
Found at i:9969 original size:474 final size:472
Alignment explanation
Indices: 9195--10070 Score: 1179
Period size: 474 Copynumber: 1.8 Consensus size: 472
9185 CTCAAACGCA
* * * * * *
9195 ACAAACATGGATTCTAGTAATTATCTTTATTCATTTTTTGATTAGGCACTATAAACTCTTTCTCC
1 ACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACTCATTCTCC
* * * * * *
9260 TAATTAGGATAAAGGATACTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCTTATTTTCC
66 TAATTAGGATAAAGGATACTGACGATTTTCTATTACAAGGAAATCTTTTCTGTGCCCTATTTTCC
* * * * * *
9325 TTAAAATCAAAGTTCATTCCTTAAATAAGACAAGCATTGATTCTCGCAATAGTGTCCATTCTTTT
131 TTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCG-AATAATCTCCATTCTTTT
* *
9390 CAAGATTAGGAACCAAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGATGCCGC
195 CAAGATTAGGAACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCTTTGATACCGC
** * *
9455 AAGAAAAGCTTTCCTTTCCATCATTTTTTATAGAATCAAAGTTCATCCCTCAAAGGAGGCAACCA
260 AAGAAAAGCTTTCCTTTCCATCATTTTAAATAGAATCAAAGTTCATCCCTCAAAAGAGACAACCA
* ** * *
9520 TGGGTTGTGGTAACCATCTCCATCTAAACATGATTAGGCATCATAAATATGTTCTCCTCACTACG
325 TGGGCTGTCATAACCATCTCCATCTAAACACGATTAGGCACCATAAATATGTTCTCCTCACTACG
9585 ATACATGATATTAACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACATAAAGTCTAT
390 ATACATGATATTAACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACATAAAGTCTAT
9650 ATTTGTGTCTCAAATGAG
455 ATTTGTGTCTCAAATGAG
9668 ACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAA-TACATTCTC
1 ACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACT-CATTCTC
** * *
9732 CTCTTTAGGGTAAATGG-TATTGACGATTTTCTATTACAAGGAAATCTTTTC-GTGACCCTATTT
65 CTAATTAGGATAAA-GGATACTGACGATTTTCTATTACAAGGAAATCTTTTCTGTG-CCCTATTT
* * *
9795 TCTTTAAAATCAATGTTCATCCCTTAAAAAAAAACAAGCATCGATTCTCG-ATGCAATCTCTATT
128 TCCTTAAAATCAAAGTTCATCCCTT-AAAAAAAACAAGCATCGATTCTCGAAT--AATCTCCATT
* * * *
9859 TTTTTCAAGATT-GGTAGCCAAAAACACATTCCCTTCTAATA-GATATATGTCATTGATGCTTTG
190 CTTTTCAAGATTAGG-AACCAAAAACACATTCCCTTC-AATAGGATACATGACATTGATGCTTTG
* ** * * * **
9922 GTATTGCAAGAAAAGCTTTTCTTTCCATCGTTTTAAATGGAATCAAAGTTTGTCCCTCAAAAGAG
253 ATACCGCAAGAAAAGCTTTCCTTTCCATCATTTTAAATAGAATCAAAGTTCATCCCTCAAAAGAG
* *
9987 ACAACCATGTGCTGTCATAACCATCTCCATCTACACACGATTAGGCACCATAAATATGTTCTCCT
318 ACAACCATGGGCTGTCATAACCATCTCCATCTAAACACGATTAGGCACCATAAATATGTTCTCCT
10052 CACTACGATACATGATATT
383 CACTACGATACATGATATT
10071 GATTCTTTGA
Statistics
Matches: 345, Mismatches: 50, Indels: 15
0.84 0.12 0.04
Matches are distributed among these distances:
472 5 0.01
473 127 0.37
474 210 0.61
475 3 0.01
ACGTcount: A:0.31, C:0.20, G:0.13, T:0.35
Consensus pattern (472 bp):
ACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACTCATTCTCC
TAATTAGGATAAAGGATACTGACGATTTTCTATTACAAGGAAATCTTTTCTGTGCCCTATTTTCC
TTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCGAATAATCTCCATTCTTTTC
AAGATTAGGAACCAAAAACACATTCCCTTCAATAGGATACATGACATTGATGCTTTGATACCGCA
AGAAAAGCTTTCCTTTCCATCATTTTAAATAGAATCAAAGTTCATCCCTCAAAAGAGACAACCAT
GGGCTGTCATAACCATCTCCATCTAAACACGATTAGGCACCATAAATATGTTCTCCTCACTACGA
TACATGATATTAACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACATAAAGTCTATA
TTTGTGTCTCAAATGAG
Found at i:11362 original size:471 final size:474
Alignment explanation
Indices: 10753--11631 Score: 1162
Period size: 471 Copynumber: 1.9 Consensus size: 474
10743 GCCTCGAACG
* * * * *
10753 AGACAAACATGGATTCTAGTAATTATCTTTATTCATTTTTTGATTAGGCACTATAAACACATTCT
1 AGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTCT
* * * * * *
10818 CCTTATTAGGATAAAAGATACTGATGATTTACTTTTGCATGGAAATCTTTTCTTTGCCTTATTTT
66 CCTTATTAGGATAAAAGATACTGACGATTTACTATTACAAGGAAATCTTTTCTGTGCCCTATTTT
* * * ** * * * *
10883 CCTTAAAATCAAAGTTCATTCCTT-AAATAAGACAAGCATTGATTCTCACAATAGTGTCCATTCG
131 CCTTAAAATCAAAGTTCATCCCTTAAAAAAAAACAAGCATCAATTCTCACAACAATCTCCATTCA
* * *
10947 TTTCAAGATTAGG-AACCAAAAACACATTCCTTTC-ATTAGGATCAT-T-ACATTGATGCTTTTG
196 TTTCAAGATT-GGTAACCAAAAACACATTCCCTTCTA-TAAGAT-ATATGACATTGATGCTTTGG
* * * *
11008 TGCCGCAAGAAAAGC-TTTCTTTCCATCATTTTTTATAGAATCAAAGTTCATCCCTCAAAGGAGG
258 TACCGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGAGA
** * * *
11072 CAACCATGGGTTGTGGTAACCAACTCCATCTACACATGGTTAGGCATCATAAATATGTTCCCCTC
323 CAACCATGGGTTGTCATAACCAACTCCATCTACACACGATTAGGCACCATAAATATGTTCCCCTC
11137 ACTACGAAACATGATATTGACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACGTAAA
388 ACTACGAAACATGATATTGACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACGTAAA
11202 GTTTATATTTGTGTCTCAAATA
453 GTTTATATTTGTGTCTCAAATA
11224 AGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTCT
1 AGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTCT
* * * *
11289 CCTCT-TTAGGATAAATGGTATTGACGATTTTCTATTACAAGGAAATCTTTTC-GTGACCCTATT
66 CCT-TATTAGGATAAAAGATACTGACGATTTACTATTACAAGGAAATCTTTTCTGTG-CCCTATT
* * ** * *
11352 TTCTTTAAAATCAATGTTCATCCCTTAAAAAAAAACAAGCATCAATTCTCGTAGCAATCTCTATT
129 TTCCTTAAAATCAAAGTTCATCCCTTAAAAAAAAACAAGCATCAATTCTCACAACAATCTCCATT
* * *
11417 TATTTCAAGATTGGTAGCCAAAAACACATTCCCTTCTATAAGATATATGTCATTGATGCTTTGGT
194 CATTTCAAGATTGGTAACCAAAAACACATTCCCTTCTATAAGATATATGACATTGATGCTTTGGT
** * * **
11482 ATTGCAAGAAAAGCTTTTCTTTCCATCGTTTTTAATGGAATCAAAGTTTGTCCCTCAAAAGAGAC
259 ACCGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGAGAC
* * *
11547 AACCATGTGTTGTCATAACCATCTCCATCTACACACGATTAGGCACCATAAATATGTTCTCCTCA
324 AACCATGGGTTGTCATAACCAACTCCATCTACACACGATTAGGCACCATAAATATGTTCCCCTCA
*
11612 CTACGATACATGATATTGAC
389 CTACGAAACATGATATTGAC
11632 TCTTTGACTT
Statistics
Matches: 345, Mismatches: 55, Indels: 13
0.84 0.13 0.03
Matches are distributed among these distances:
470 2 0.01
471 135 0.39
472 63 0.18
473 26 0.08
474 119 0.34
ACGTcount: A:0.32, C:0.20, G:0.13, T:0.35
Consensus pattern (474 bp):
AGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTCT
CCTTATTAGGATAAAAGATACTGACGATTTACTATTACAAGGAAATCTTTTCTGTGCCCTATTTT
CCTTAAAATCAAAGTTCATCCCTTAAAAAAAAACAAGCATCAATTCTCACAACAATCTCCATTCA
TTTCAAGATTGGTAACCAAAAACACATTCCCTTCTATAAGATATATGACATTGATGCTTTGGTAC
CGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGAGACAA
CCATGGGTTGTCATAACCAACTCCATCTACACACGATTAGGCACCATAAATATGTTCCCCTCACT
ACGAAACATGATATTGACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACGTAAAGTT
TATATTTGTGTCTCAAATA
Found at i:12958 original size:471 final size:474
Alignment explanation
Indices: 12319--13197 Score: 1139
Period size: 471 Copynumber: 1.9 Consensus size: 474
12309 TGCCTCGAAC
* * * * *
12319 GAGACAAACATGGATTCTAGTAATTATCTTTATTCATTTTTTGATTAGGCACTATAAACACATTC
1 GAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTC
** * * *
12384 TCCTTATTAGGATAAAGGATACTGATGATTTACTTTTGCATGAAAATCTTTTCTTTGCCTTATTT
66 TCCGCATTAGGATAAAGGATACTAATGATTTACTTTAGCAAGAAAATCTTTTCTTTGCCTTATTT
* * * * * * * *
12449 TCCTTAAAATCAAAGTTCATTCCTTAAATAAGACAAGCATTGATTCTCACAATAGTGTCCA-TTC
131 TCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCACAACAATCTCCATTTA
* *
12513 GTTTCAAGATTAGG-AACCAAAAACACATT-CC-TTTCATTAGGATCAT-T-ACATTGATGCTTT
196 GTTTCAAGATT-GGTAACCAAAAACACATTCCCGTTT-A-TAAGAT-ATATGACATTGAAGCTTT
* * *
12573 GGTGCCGCAAGAAAAGC-TTTCTTTCCATCATTTTTTATAGAATCAAAGTTCATCCCTCAAAGGA
257 GGTGCCACAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGA
* ** * * *
12637 GGCAACCATGGGTTGTGGTAACCAACTCCATCTACACATGGTTCGGCATCATAAATATGTACTCC
322 GACAACCATGGGTTGTCATAACCAACTCCATCTACACATGCTTAGGCACCATAAATATGTACTCC
12702 TCACTACGAAACACGATATTGACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACGTA
387 TCACTACGAAACACGATATTGACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACGTA
12767 AAGTTTATATTTGTGTCTCAAAT
452 AAGTTTATATTTGTGTCTCAAAT
12790 GAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTC
1 GAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTC
* * * * *
12855 TCCGCATTAGGAT-AAGTGGTATTAATGATTTTCTATTAG-AAGGAAATCTTTTCTTTATCC-TA
66 TCCGCATTAGGATAAAG-GATACTAATGATTTACT-TTAGCAAGAAAATCTTTTCTTT-GCCTTA
* **** *
12917 TTTTCCTTAAAATCAATGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCGTTGCAATCTCTAT
128 TTTTCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCACAACAATCTCCAT
* * *
12982 TTATTTTCAAGATTGGTAGCCAAAAACACATTCCCGTTTATAAGATATATGTCATTGAAGCTTTG
193 TTAGTTTCAAGATTGGTAACCAAAAACACATTCCCGTTTATAAGATATATGACATTGAAGCTTTG
* * * * **
13047 GTGTCATAAGAAAAGCTTTTCTTTCCATCGTTTTTAATGGAATCAAAGTTTGTCCCTCAAAAGAG
258 GTGCCACAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGAG
* * *
13112 ACAACCATGTGTTGTCATAACCATCTCCATCTACACATGCTTAGGCACCATAAATATGTTCTCCT
323 ACAACCATGGGTTGTCATAACCAACTCCATCTACACATGCTTAGGCACCATAAATATGTACTCCT
* *
13177 CACTACGATACATGATATTGA
388 CACTACGAAACACGATATTGA
13198 TTCTTTGACT
Statistics
Matches: 344, Mismatches: 54, Indels: 17
0.83 0.13 0.04
Matches are distributed among these distances:
470 3 0.01
471 156 0.45
472 37 0.11
473 28 0.08
474 120 0.35
ACGTcount: A:0.32, C:0.20, G:0.14, T:0.35
Consensus pattern (474 bp):
GAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAACACATTC
TCCGCATTAGGATAAAGGATACTAATGATTTACTTTAGCAAGAAAATCTTTTCTTTGCCTTATTT
TCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCACAACAATCTCCATTTA
GTTTCAAGATTGGTAACCAAAAACACATTCCCGTTTATAAGATATATGACATTGAAGCTTTGGTG
CCACAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGAGACA
ACCATGGGTTGTCATAACCAACTCCATCTACACATGCTTAGGCACCATAAATATGTACTCCTCAC
TACGAAACACGATATTGACATTTTGGTTTCACAAGAAAGGCATTTTTCTCCTCACTACGTAAAGT
TTATATTTGTGTCTCAAAT
Found at i:14523 original size:471 final size:471
Alignment explanation
Indices: 13877--14761 Score: 1188
Period size: 471 Copynumber: 1.9 Consensus size: 471
13867 TAGTTCTTGC
* * * * *
13877 CTCAAACGAGACAAACATGGATTCTAGTAATTATCTTTATTCATTTTTTGATTAGGCACTATAAA
1 CTCAAACGAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAA
** * * *
13942 CACATTCTACTTATTAGGATAATGGATACTGATCATTTTCTTTTGCAAGGAAATCTTTTCTTTGC
66 CACATTCTACGCATTAGGATAATGGATACTGATCACTTTCTATTACAAGGAAATCTTTTCTTTGC
* * * * * * *
14007 CTTATTTTCCTTAAAATCAAAGTTCATTCTTTAAATAAGACAAGCATTGATTCTCGCAGTAATGT
131 CTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCGCAGCAATCT
* * *
14072 CCATTCGTTTCAAGATTAGG-AACCAAAAAGACATTCCCTTCAT-TAGGATCACTA-CATTGATG
196 CCATTCGTTTCAAAATT-GGTAACCAAAAACACATTCCCTT-ATATAAGAT-A-TATCATTGATG
*
14134 CTTTGGTGCCGCAAGAAAAGC-TTTCTTTCCATCATTTTTTATAGAATCAAAGTTCATCCCTCAA
257 CTTTGGTGCCGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAA
* * * ** * * * *
14198 AGGTGGCAACCATGGGTTGTGGTAATCATTTCCATCTACACATAATTAGGCATCATAAATATGTT
322 AAGAGACAACCATGGGTTGTCATAACCATCTCCATCTACACACAATTAGGCACCATAAATATGTT
14263 CTCCTCACTACGAAACACGATATTGACATTTTGGTTTCACAATGAAGGCATTTTTCTCCTCACTA
387 CTCCTCACTACGAAACACGATATTGACATTTTGGTTTCACAATGAAGGCATTTTTCTCCTCACTA
14328 CGTAAAGTTTATATTTGTGT
452 CGTAAAGTTTATATTTGTGT
*
14348 CTCAAATGAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAA
1 CTCAAACGAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAA
* * * *
14413 CACATTCTCCGCATTAGGCTAAATGG-TATTGATGACTTTCTATTACAAGGAAATCTTTTCTTTA
66 CACATTCTACGCATTAGGAT-AATGGATACTGATCACTTTCTATTACAAGGAAATCTTTTCTTT-
* *
14477 TCC-TATTTTCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCGTAGCAAT
129 GCCTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCGCAGCAAT
* ** * *
14541 CTCTATTTTTTTCAAAATTGGTAGCCAAAAACACATTCCCTTTTATAAGATATATGTCATTGATG
194 CTCCATTCGTTTCAAAATTGGTAACCAAAAACACATTCCCTTATATAAGATATA--TCATTGATG
** * **
14606 CTTTGGTGTTGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATGGAATCAAAGTTTGTCCCTCAA
257 CTTTGGTGCCGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAA
* **
14671 AAGAGACAACCATGTGTTGTCATAACCATCTCCATCTACACACGCTTAGGCACCATAAATATGTT
322 AAGAGACAACCATGGGTTGTCATAACCATCTCCATCTACACACAATTAGGCACCATAAATATGTT
* *
14736 CTCCTCACTACGATACATGATATTGA
387 CTCCTCACTACGAAACACGATATTGA
14762 TTCTTTGACT
Statistics
Matches: 354, Mismatches: 52, Indels: 14
0.84 0.12 0.03
Matches are distributed among these distances:
469 2 0.01
470 4 0.01
471 198 0.56
472 34 0.10
473 116 0.33
ACGTcount: A:0.31, C:0.20, G:0.13, T:0.35
Consensus pattern (471 bp):
CTCAAACGAGACAAACATGGATTCTACTAATGATCTTCACTCATTTTGTGATTAGGCACTATAAA
CACATTCTACGCATTAGGATAATGGATACTGATCACTTTCTATTACAAGGAAATCTTTTCTTTGC
CTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAAAAAAACAAGCATCGATTCTCGCAGCAATCT
CCATTCGTTTCAAAATTGGTAACCAAAAACACATTCCCTTATATAAGATATATCATTGATGCTTT
GGTGCCGCAAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTCATCCCTCAAAAGA
GACAACCATGGGTTGTCATAACCATCTCCATCTACACACAATTAGGCACCATAAATATGTTCTCC
TCACTACGAAACACGATATTGACATTTTGGTTTCACAATGAAGGCATTTTTCTCCTCACTACGTA
AAGTTTATATTTGTGT
Found at i:19428 original size:473 final size:474
Alignment explanation
Indices: 18115--19719 Score: 2087
Period size: 473 Copynumber: 3.4 Consensus size: 474
18105 ATTATAAAAA
* * * * *
18115 CAATTTTTGTAAAGTCTAAGTTCGTACCTCAAATGAGACAAACATTGATTCTAGTAATGATCTTT
1 CAATATTTGTAAAGTCTAAGTTCATACCACAAATGAGACAAACATGGATTCTAGTAATGATCTTC
* * *
18180 ATTCGTTTTGTGATTAGGCACTATAAAAACAATCTCCTCATTAGGATAAATGATATT-GATGATT
66 ATTCATTTTATGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAATGATATTAG-TGATT
* * * * *
18244 TTCTTTAGCATTG-AAATTTTTTCTTTGCCCTATTTTCCTTAAATTCAAAGTTCACCCCTTAAAG
130 TTCTTTTGCA-TGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAAT
* ** * * *
18308 AAAATTAGCATTGATTCTCGCAACAGTCTCTATTCTTTTCAAGATTGGGAACTAAAAACACATTC
194 AAGACAAGCATCGATTCTTG-AACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTC
* ** * *
18373 CCTTAATTAGGATACATG-CATTGACACTTTGGTGTCATAAGAAAAGCTTCTCTTTCCACCGTTT
258 CCTTCATTAGGATACATGACATTGATTCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTT
* * * * *
18437 TTGATAGAATC-AAGTTTATATTTTAAATAAGATAAACATGAATAGTCAAACTAATCCCCATTCT
323 TTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCT
* *
18501 TTTTAGGATTAGGCACCATAAGCATAGTTTTCTCGTAAGGATACACGATATTGATGCTTTGCTTT
388 TTTTAGGATTAGGCACCATAAGCATAGTCTTCTCATAAGGATACACGATATTGATGCTTTG-TTT
* *
18566 CTCAAGAAAGGCTTTTTTCCCAC
452 CACAAGAAAGGCTTTCTTCCCAC
* * * *
18589 CAATATTTGTAAAGTCTAAGTTCATGCCATAAATGAGAAAAACAAGGATTCTAGTAATGATCTTC
1 CAATATTTGTAAAGTCTAAGTTCATACCACAAATGAGACAAACATGGATTCTAGTAATGATCTTC
* * * * * * *
18654 ATTCATTTTATAAATAGCCACTATAAACACATTCTCCTCATTAGGATAAATAATATTGGTAATTT
66 ATTCATTTTATGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAATGATATTAGTGATTT
* *
18719 T-TTTTGCATGAAAATCTTTT-TTT-CACTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAA
131 TCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAA
*
18781 GACAAGCATCGATTCTCAT-AACAGTCTCTATTCTTTTCAAGATTGGGAA-CTAAAACACATTCC
196 GACAAGCATCGATTCT--TGAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCC
* * *
18844 CTTCATTAGGATACATAACATTAATTCTTTAGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTT
259 CTTCATTAGGATACATGACATTGATTCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTT
* * **
18909 TGATAGAATCAAAGTTTGTCTGTTAAATAAGACAAACATGAATAGTCATGCTAATCCCTGTTCTT
324 TGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTT
* *
18974 TTCAGGATTAGGCACCATAAGCATAGTCTTCTCATAGGGATACACGATATTGATGCTTTAGTTTC
389 TTTAGGATTAGGCACCATAAGCATAGTCTTCTCATAAGGATACACGATATTGATGCTTT-GTTTC
*
19039 ACATA-AATGGCTTTCTTCCCAC
453 ACA-AGAAAGGCTTTCTTCCCAC
* *
19061 CAATATTTGTAAAGTCTAAGTTCGTACCACAAAT-ATGACAAACATGGATTCTAGTAATGATCCT
1 CAATATTTGTAAAGTCTAAGTTCATACCACAAATGA-GACAAACATGGATTCTAGTAATGATCTT
*
19125 CATTCATTTTATGATTAGGCACTATAAATACAATCTCCTCATTAGGATAAATGATATTAGTGATT
65 CATTCATTTTATGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAATGATATTAGTGATT
* * * * *
19190 TACTCTTGCTTGGAAATCTTTT-TTT-CCTTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATA
130 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATA
* * * * *
19253 AGACAAGCATCGATTCTTGAACAGTCTCCATTCTTATCGAGATTAGGAACCAAAAACACATTCCT
195 AGACAAGCATCGATTCTTGAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCC
* * ** ***
19318 TTCATTATGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTTATTATTTTT
260 TTCATTAGGATACATGACATTGATTCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTT
*
19383 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTTTTT
325 GATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTT
* * * *
19448 TTAGGATTAGGCATCATAAACATAGTCTTCTCATAAGAATACACAATATTGATGCTTTGGTTTCA
390 TTAGGATTAGGCACCATAAGCATAGTCTTCTCATAAGGATACACGATATTGATGCTTT-GTTTCA
*
19513 CAAGAAAGGCTTTCTTCCCCC
454 CAAGAAAGGCTTTCTTCCCAC
* * * * * *
19534 CAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT-ATGCCAAAAATGGATTCTAGTATTGATCTT
1 CAATATTTGTAAAGTCTAAGTTCATACCACAAATGA-GACAAACATGGATTCTAGTAATGATCTT
* * * * * * * *
19598 CAATCATTTTGTGACTAGACACTATAAACACATTCTACTCA-T----TAAATGATACTAATGATT
65 CATTCATTTTATGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAATGATATTAGTGATT
* *
19658 TTCTTTTGCACGAAAATCTTTTCTTTGCCCTATTTTCCTTAGAATCAAAGTTCATCCCTTAA
130 TTCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAA
19720 TGTGATACAT
Statistics
Matches: 986, Mismatches: 130, Indels: 34
0.86 0.11 0.03
Matches are distributed among these distances:
468 33 0.03
469 3 0.00
470 60 0.06
471 129 0.13
472 269 0.27
473 380 0.39
474 111 0.11
475 1 0.00
ACGTcount: A:0.33, C:0.18, G:0.12, T:0.37
Consensus pattern (474 bp):
CAATATTTGTAAAGTCTAAGTTCATACCACAAATGAGACAAACATGGATTCTAGTAATGATCTTC
ATTCATTTTATGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAATGATATTAGTGATTT
TCTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAA
GACAAGCATCGATTCTTGAACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACACATTCCCT
TCATTAGGATACATGACATTGATTCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTTG
ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCCCATTCTTTT
TAGGATTAGGCACCATAAGCATAGTCTTCTCATAAGGATACACGATATTGATGCTTTGTTTCACA
AGAAAGGCTTTCTTCCCAC
Found at i:20494 original size:862 final size:860
Alignment explanation
Indices: 18985--20585 Score: 2264
Period size: 862 Copynumber: 1.9 Consensus size: 860
18975 TCAGGATTAG
* * *
18985 GCACCATAAGCATAGTCTTCTCATAGGGATACACGATATTGATGCTTTAGTTTCACATAAATGGC
1 GCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGATGCTTTAGTTTCACATAAAAGGC
* * *
19050 TTTCTTCCCACCAATATTTGTAAAGTCTAAGTTCGTACCACAAATATGACAAACATGGATTCTAG
66 TTTCCTCCCACCAATATTTGTAAAGTCTAAGTTCGTAACACAAATATGACAAACACGGATTCTAG
* * *
19115 TAATGATCCTCATTCATTTTATGATTAGGCACTATAAATACAATCTCCTCATTAGGATAAATGAT
131 TAATGATCCTCATTCATTTTAGGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAAAGAT
* ** *
19180 ATTAGTGATTTACTCTTGCTTGGAAATCTTTTTTTCCTTATTTTCCTTAAAATCAAAGTTCATCC
196 ATTAGTGATTTACTCTTACAAGGAAATCTTTTTTTCCTTACTTTCCTTAAAATCAAAGTTCATCC
* * * *
19245 CTTAAATAAGACAAGCATCGATTCTTGAACAGTCTCCATTCTTATCGAGATTAGGAACCAAAAAC
261 CTTAAATAAGACAAGAATCAATTCTCGAACAGTCTCCATTCTTATCAAGATTAGGAACCAAAAAC
* * *
19310 ACATTCCTTTCATTATGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTTA
326 ACATTCCCTTCATTAGGATACATGACATTGATCCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTTA
* * * *
19375 TTATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAGTCATACTAATCCC
391 TTATTTTTGATAAAATCAAAGTTTGTCTCTTAAATAAAAAAAACATGAATACTCATACTAATCCC
* * * * * *
19440 CATTTTTTTTAGGATTAGGCATCATAAACATAGTCTTCTCATAAGAATACACAATATTGATGCTT
456 AATTCTTTTGAGCATTAGGCACCATAAAAATAGTCTTCTCATAAGAATACACAATATTGATGCTT
* *
19505 TGGTTTCACAAGAAAGGCTTTCTTCCCCCCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATAT
521 TGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCATGCCTCAAATAT
* * *
19570 GCCAAAAATGGATTCTAGTATTGATCTTCAATCATTTTGTGACTAGACACTATAAACACATTCTA
586 GACAAAAATGGATTCTACTAATGATCTTCAATCATTTTGTGACTAGACACTATAAACACATTCT-
* *
19635 C-TCATT-AAATGATACTAATGATTTTCTTTTGCACGAAAATCTTTTCTTTGCCCTATTTTCCTT
650 CTTCATTAAAATGATACTAATGATTTTCTTTTGCACGAAAATCTTTTCTATGCCCTATTTTCCTA
*
19698 AGAATCAAAGTTCATCCCTTAATGTGATACATGACATTGATGGTTTGGCTTTGCAAGAAAGAGAT
715 AAAATC-AAGTTCATCCCTTAATGTGATACATGACATTGATGGTTTGGCTTTGCAAGAAAGAGAT
19763 TTTTTACAACCATTTTTTATAGAATCAAAGTTTGTCTTTTAAATAAGATAAACATGAATTCTTAC
779 TTTTTACAACCATTTTTTATAGAATCAAAGTTTGTCTTTTAAATAAGATAAACATGAATTCTTAC
19828 ACTGATCCTCATTCTTT
844 ACTGATCCTCATTCTTT
* * *
19845 GCACCATAAACATAGTCTTCTCATAAGGATACACGATGTTGGTGCTTTAGTTTCGCA-AGAAAGG
1 GCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGATGCTTTAGTTTCACATA-AAAGG
* *
19909 CTTTCCTCCCACCAATTTTTGTAAAGTCTAAGTTCGTAACTCAAATGA-GACAAACACGGATTCT
65 CTTTCCTCCCACCAATATTTGTAAAGTCTAAGTTCGTAACACAAAT-ATGACAAACACGGATTCT
* * * * * * **
19973 AGTAATGATCTTTATTCATTTTGGGATTAGGCTCTATAAACATATTCTCCTTGTTAGGATAAAAG
129 AGTAATGATCCTCATTCATTTTAGGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAAAG
* * *
20038 ATCTT-GATGATTTTCTTTTACAAGGAAATCTTTTCTTTGCCTTACTTTCCTTAAAATCAAAGTT
194 ATATTAG-TGATTTACTCTTACAAGGAAATCTTTT-TTT-CCTTACTTTCCTTAAAATCAAAGTT
* * * * *
20102 CATCCTTTAAATAAGACAAGAATCAATTCTCGTAATAGTCTCCATTCTTTTCAAGATTGGGAACT
256 CATCCCTTAAATAAGACAAGAATCAATTCTCG-AACAGTCTCCATTCTTATCAAGATTAGGAACC
*
20167 AAAAACACATTCCCTTCATTAGGATACATGACATTGATCCTTTGGTGTCGTAA-AAAAGCTTTTC
320 AAAAACACATTCCCTTCATTAGGATACATGACATTGATCCTTTGGTGTCGCAAGAAAAGCTTTTC
* * * * *
20231 TTTTTGTTGTTTTTGATAAAATCAATGTTTGTCTCTTAAATAAAAAAAACATTAATACTCATGCT
385 TTTTTATTATTTTTGATAAAATCAAAGTTTGTCTCTTAAATAAAAAAAACATGAATACTCATACT
* * * **
20296 AATCCCAATTCTTTTGAGCATTAGGCACCATAAAAATAGTCTTTTCATTAGGATACATGATATTG
450 AATCCCAATTCTTTTGAGCATTAGGCACCATAAAAATAGTCTTCTCATAAGAATACACAATATTG
* **
20361 ATGCTTTGGTTTCACAAGAAAGGCATTT-TTCCCACCAATTTTTGTAAAATCTAGGTTTTTGCCT
515 ATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCATGCCT
* * * * * *
20425 TAAAT-TAGACAAATATGGATTCTACTAATGATCTTCAATCATTTTGTGATTAGGCATTATAATC
579 CAAATAT-GACAAAAATGGATTCTACTAATGATCTTCAATCATTTTGTGACTAGACACTATAAAC
* * * * *
20489 ACATTCTCTTCTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTATGCC
643 ACATTCTCTTCATT----AAAATGATACTAATGATTTTCTTTTGCACGAAAATCTTTTCTATGCC
20554 CTATTTTCCTAAAAATCAAGTTCATCCCTTAA
704 CTATTTTCCTAAAAATCAAGTTCATCCCTTAA
20586 ATAAGCAAGC
Statistics
Matches: 643, Mismatches: 84, Indels: 22
0.86 0.11 0.03
Matches are distributed among these distances:
859 2 0.00
860 193 0.30
861 6 0.01
862 292 0.45
863 79 0.12
866 15 0.02
867 56 0.09
ACGTcount: A:0.32, C:0.18, G:0.13, T:0.38
Consensus pattern (860 bp):
GCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGATGCTTTAGTTTCACATAAAAGGC
TTTCCTCCCACCAATATTTGTAAAGTCTAAGTTCGTAACACAAATATGACAAACACGGATTCTAG
TAATGATCCTCATTCATTTTAGGATTAGGCACTATAAACACAATCTCCTCATTAGGATAAAAGAT
ATTAGTGATTTACTCTTACAAGGAAATCTTTTTTTCCTTACTTTCCTTAAAATCAAAGTTCATCC
CTTAAATAAGACAAGAATCAATTCTCGAACAGTCTCCATTCTTATCAAGATTAGGAACCAAAAAC
ACATTCCCTTCATTAGGATACATGACATTGATCCTTTGGTGTCGCAAGAAAAGCTTTTCTTTTTA
TTATTTTTGATAAAATCAAAGTTTGTCTCTTAAATAAAAAAAACATGAATACTCATACTAATCCC
AATTCTTTTGAGCATTAGGCACCATAAAAATAGTCTTCTCATAAGAATACACAATATTGATGCTT
TGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCATGCCTCAAATAT
GACAAAAATGGATTCTACTAATGATCTTCAATCATTTTGTGACTAGACACTATAAACACATTCTC
TTCATTAAAATGATACTAATGATTTTCTTTTGCACGAAAATCTTTTCTATGCCCTATTTTCCTAA
AAATCAAGTTCATCCCTTAATGTGATACATGACATTGATGGTTTGGCTTTGCAAGAAAGAGATTT
TTTACAACCATTTTTTATAGAATCAAAGTTTGTCTTTTAAATAAGATAAACATGAATTCTTACAC
TGATCCTCATTCTTT
Found at i:21317 original size:477 final size:475
Alignment explanation
Indices: 19723--21666 Score: 2228
Period size: 474 Copynumber: 4.1 Consensus size: 475
19713 CCCTTAATGT
* * * * * * * *
19723 GATACATGACATTGATGGTTTGGCT-TTGCAAGAAAGAGATTTT-TTACAACCATTTTTTATAGA
1 GATACATGACATTGATGCTTTGG-TGTCGCAAGAAA-AGCTTTTCTTTCCACCGTTTTTGATAAA
* ** * * * *
19786 ATCAAAGTTTGTCTTTTAAATAAGATAAACATGAATTCTTACACTGATCCTCATTC---T----T
64 ATCAAAGTTTGTCTTTTAAATAAGAAAAACATGAATAGTCATACTAATCCCCATTCTTTTAAGAT
* * * * * * *
19844 T--GCACCATAAACATAGTCTTCTCATAAGGATACACGATGTTGGTGCTTTAGTTTCGCAAGAAA
129 TAGGCAGCATAAACAAAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAAGAAA
* * * *
19907 GGCTTTCCTCCCACCAATTTTTGTAAAGTCTAAGTTCGTAACTCAAATGAGACAAACACGGATTC
194 GGCTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCGTACCTCAAATGAGACAAACATGGATTC
* * * * *
19972 TAGTAATGATCTTTATTCATTTTGGGATTAGGCTCTATAAA-CATATTCTCCTTGTTAGGATAAA
259 TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATCACA-TCTCCTTATTAGGATAAA
* * * * *
20036 AGAT-CTTGATGATTTTCTTTTACAAGGAAATCTTTTCTTTGCCTTACTTTCCTTAAAATCAAAG
323 TGATAC-TGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* * * * *
20100 TTCATCCTTTAAATAAGACAAGAATCAATTCTCGTAATAGTCTCCATTCTTTTCAAGATTGGGAA
387 TTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCCTTTCAAGATTGGGAA
* *
20165 CTAAAAACACATTCCCTTCATTAG
452 CCAAAAACACATTCCCTTAATTAG
* * *****
20189 GATACATGACATTGATCCTTTGGTGTCGTAA-AAAAGCTTTTCTTTTTGTTGTTTTTGATAAAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAAT
* * * * * * * *
20253 CAATGTTTGTCTCTTAAATAAAAAAAACATTAATACTCATGCTAATCCCAATTCTTTTGAGCATT
66 CAAAGTTTGTCTTTTAAATAAGAAAAACATGAATAGTCATACTAATCCCCATTCTTTTAAG-ATT
* * *
20318 AGGCACCATAAA-AATAGTCTTTTCATTAGGATACATGATATTGATGCTTTGGTTTCACAAGAAA
130 AGGCAGCATAAACAA-AGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAAGAAA
* ** * * * *
20382 GGCATTT-TTCCCACCAATTTTTGTAAAATCTAGGTTTTTGCCTTAAATTAGACAAATATGGATT
194 GGC-TTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCGTACCTCAAATGAGACAAACATGGATT
* * * * *
20446 CTACTAATGATCTTCAATCATTTTGTGATTAGGCATTAT-AATCACAT-TCTCTTCTTTAGGAAA
258 CTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATCACATCTC-CTT-ATTAGGATA
* * *
20509 AATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTATGCCCTATTTTCCTAAAAATC-AA
321 AATGATACTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
** * * *
20573 GTTCATCCCTTAAATAAG-CAAGCATCGATTCTCGTAATTGTCTTCATTCTTTTCGAGATTGGGA
386 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCCTTTCAAGATTGGGA
* * * *
20637 ACCAGAAACACATTTCTTTCATTAG
451 ACCAAAAACACATTCCCTTAATTAG
* * * * * *
20662 GATACATGACATTGAAGCTTTGATGTTGCAAGAAAAGCTTTTCTTTCCACTGTTTTTTATATAAT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAAT
* *
20727 CAAAGTTTGTCTTTTAAATAAGACAAACATGAATAGCCATACTAATCCCCATTCTTTTTAAGATT
66 CAAAGTTTGTCTTTTAAATAAGAAAAACATGAATAGTCATACTAATCCCCATTC-TTTTAAGATT
* * * * * *
20792 AGGCAGCATAAACAAAGCCTGCTCATTAGGGTGCATGATATTGATGCTTTGGATTCACAAGAAAG
130 AGGCAGCATAAACAAAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAAGAAAG
* * * *
20857 GCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCT
195 GCTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCGTACCTCAAATGAGACAAACATGGATTCT
* *
20922 CGTAACGATCTTCATTCATTTTGTGATTAGGCACTATAAATGCA-ATCTCCTTATTAGGATAAAT
260 AGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAAT-CACATCTCCTTATTAGGATAAAT
* * * * * *
20986 GATACTAATAATTTTCTATTGCATGGAAATATTTTCTTTGCCCTAATTTCCTTAAAGTCAAAGTT
324 GATACTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTT
* * * ** *
21051 CATCCCATAAATAAGGCAAGCATTGATTCTCGTAACAACCTCCATTCCTTTCAAGATTAGGAACC
389 CATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCCTTTCAAGATTGGGAACC
21116 AAAAACACATTCCCTTAATTAG
454 AAAAACACATTCCCTTAATTAG
* * * * *
21138 GATACACGACATTGATGCTTTGGTGTTCACAAGAAAAGCTTTTTTTTTCACCGTTTTTGATAGAA
1 GATACATGACATTGATGCTTTGGTG-TCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAA
* * * *
21203 TCAAAGTTTGCCTTTTAAATAAGATAAACATGAATAGTTATCCTAATCCCCATTCTTTTCAAGAT
65 TCAAAGTTTGTCTTTTAAATAAGAAAAACATGAATAGTCATACTAATCCCCATTCTTTT-AAGAT
* * ** *
21268 TAGGTAGCATAAATAAAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTGCAAGATA
129 TAGGCAGCATAAACAAAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAAGAAA
* *
21333 GGTTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCGTACCTCAAATGAGACAAACATTGATTC
194 GGCTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCGTACCTCAAATGAGACAAACATGGATTC
* * * *
21398 TAGTAATGATCTTCATTCATTTTCTGATTATGCACTAT-AACCACATTCTCCTCATTAGGATAAA
259 TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATCACA-TCTCCTTATTAGGATAAA
* * *
21462 TGATA-TGGATGATTTTCTTTTGCATGAAAATCTTTTCTTTGTCCTGTTTTCCTT-AAATCAAAG
323 TGATACT-GATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* * **
21525 TTCATCCCTTAAATAAGACAAGCATTGATTC-CTGTAGCAGTCTCCATTCCTTTCAAGGCTGGGA
387 TTCATCCCTTAAATAAGACAAGCATCGATTCTC-GTAACAGTCTCCATTCCTTTCAAGATTGGGA
* * *
21589 ACCAAAAGCATATTCCCTTAATTAA
451 ACCAAAAACACATTCCCTTAATTAG
* *
21614 GATACATGACATTGATGATTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGT
1 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGT
21667 GTGAGCTCAA
Statistics
Matches: 1243, Mismatches: 202, Indels: 57
0.83 0.13 0.04
Matches are distributed among these distances:
464 6 0.00
465 59 0.05
466 25 0.02
468 1 0.00
473 95 0.08
474 301 0.24
475 259 0.21
476 202 0.16
477 295 0.24
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAAAAT
CAAAGTTTGTCTTTTAAATAAGAAAAACATGAATAGTCATACTAATCCCCATTCTTTTAAGATTA
GGCAGCATAAACAAAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCACAAGAAAGG
CTTTCTTCCCACCAATTTTTGTAAAATCTAAGTTCGTACCTCAAATGAGACAAACATGGATTCTA
GTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAATCACATCTCCTTATTAGGATAAATGA
TACTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA
TCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCCTTTCAAGATTGGGAACCAA
AAACACATTCCCTTAATTAG
Found at i:22539 original size:21 final size:21
Alignment explanation
Indices: 22509--22568 Score: 102
Period size: 21 Copynumber: 2.8 Consensus size: 21
22499 CATGAATAGT
*
22509 GATACGTGAAAGTGATGTATC
1 GATACATGAAAGTGATGTATC
22530 GATACATGAAAGTGATGTATC
1 GATACATGAAAGTGATGTATC
22551 GATACATGAACAGTGATG
1 GATACATGAA-AGTGATG
22569 AATTGTGATG
Statistics
Matches: 37, Mismatches: 1, Indels: 1
0.95 0.03 0.03
Matches are distributed among these distances:
21 30 0.81
22 7 0.19
ACGTcount: A:0.37, C:0.10, G:0.27, T:0.27
Consensus pattern (21 bp):
GATACATGAAAGTGATGTATC
Found at i:22544 original size:34 final size:34
Alignment explanation
Indices: 22452--22545 Score: 106
Period size: 34 Copynumber: 2.8 Consensus size: 34
22442 ATACTATTTA
22452 TGATGTATCGATACATGAATAGTG--ATGAATAG
1 TGATGTATCGATACATGAATAGTGATATGAATAG
* *
22484 TGATTTTTAACGATACATGAATAGTGATACGTGAA-AG
1 TGA--TGTATCGATACATGAATAGTGATA--TGAATAG
22521 TGATGTATCGATACATGAA-AGTGAT
1 TGATGTATCGATACATGAATAGTGAT
22546 GTATCGATAC
Statistics
Matches: 52, Mismatches: 4, Indels: 10
0.79 0.06 0.15
Matches are distributed among these distances:
32 3 0.06
34 25 0.48
35 14 0.27
36 1 0.02
37 5 0.10
38 4 0.08
ACGTcount: A:0.37, C:0.07, G:0.23, T:0.32
Consensus pattern (34 bp):
TGATGTATCGATACATGAATAGTGATATGAATAG
Found at i:22667 original size:34 final size:34
Alignment explanation
Indices: 22629--22714 Score: 136
Period size: 34 Copynumber: 2.5 Consensus size: 34
22619 ACATAGTTTG
* *
22629 TGTATCGATACAAATTTGGCTATTGCCAGTGACC
1 TGTATCGATACAAATTTGGCTACTGCCAATGACC
*
22663 TGTATCGATACAAATTTGGCTACTGCCAATGTCC
1 TGTATCGATACAAATTTGGCTACTGCCAATGACC
*
22697 TGTATCGATACATATTTG
1 TGTATCGATACAAATTTG
22715 TGTGTATCGA
Statistics
Matches: 48, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
34 48 1.00
ACGTcount: A:0.27, C:0.20, G:0.19, T:0.35
Consensus pattern (34 bp):
TGTATCGATACAAATTTGGCTACTGCCAATGACC
Found at i:22760 original size:20 final size:20
Alignment explanation
Indices: 22697--22767 Score: 74
Period size: 20 Copynumber: 3.5 Consensus size: 20
22687 GCCAATGTCC
**
22697 TGTATCGATACATATTTGTG
1 TGTATCGATACATATTAATG
* *
22717 TGTATCGATAC-TATGCAATC
1 TGTATCGATACATAT-TAATG
22737 TGTATCGATACAT-TTAAATG
1 TGTATCGATACATATT-AATG
22757 TGTATCGATAC
1 TGTATCGATAC
22768 TTTTCAGGGT
Statistics
Matches: 42, Mismatches: 6, Indels: 6
0.78 0.11 0.11
Matches are distributed among these distances:
19 3 0.07
20 38 0.90
21 1 0.02
ACGTcount: A:0.30, C:0.14, G:0.17, T:0.39
Consensus pattern (20 bp):
TGTATCGATACATATTAATG
Found at i:24957 original size:475 final size:473
Alignment explanation
Indices: 23070--25712 Score: 2973
Period size: 475 Copynumber: 5.6 Consensus size: 473
23060 AGGTTTGACC
** * * *
23070 CTTAAATAAGATGAGCGTCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGAGAACCAAAAA
1 CTTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAA
**
23135 TATATTCCCTTCATTAGGATACATGACATT-ATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCC
65 TGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCC
** * * * * * *
23199 AAAATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATTATTAGTCATACTAATCT
130 ACCATTTTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC-
*** * * * * **
23264 CCATTCTTTTTTCGATTAGGCACCATAAATATTGTCTTCTCATAAGGATACACAACGTTGATGCT
194 CCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCT
* * * * *
23329 TTGGTTT-TGCAAGAAAGGCTTTCTTCCTACCAATTTTTATAAAGTCTAAGTTTGTACCTCAAAT
259 TTGGTTTCT--AAAAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
* * * *
23393 GAGATAAA-ATGGATTGTAGTAATGATTTTCATTTATTTTGTGATTAAGCACTATAAACACATTC
322 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAAGCACTATAAACACATTC
* * * * * *
23457 TCCTCATTAGGATAAATGAGT-TTGATGATTTTTTTTTTGCATAGAAATCTTTTCCTTGCCCTAT
387 TCCTTATTAGGATAAACGA-TATTGATGA-TTTTCTATTGCATGGAAATCTTTTCTTTGCCCTAT
23521 TTTCCTTAAAATCAAAGTTCATC-
450 TTTCCTTAAAATCAAAGTTCATCT
* * * *
23544 CTTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAA
1 C-TTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAA
* * * *** *
23609 ATGCATTCCCTTCTTTAGGATACATGACTTTGAAGCTTTGGTGTTGCAAGAAAAGCTTTTATTTC
64 ATGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTC
* * * * * * * * *
23674 CACCGTTTTTTATAGTATTAAAGTTTATCACTTAAAAAAGAGAAACTTGAATACTCATACTAATC
129 CACCATTTTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC
* * * * * **
23739 CTTATTCATTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATTATATTGATGC
194 C-CATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
23804 TTTGGTTTCGTAAGAAAA-GCTTTTTTCACATCAATTTTTGTAAAGTCTAAATTCTTGTCC-CAA
258 TTTGGTTTC-TAA-AAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTG-CCTCAA
* * * *
23867 AGGAGACAAACATAGATTCTAGTAATAATCTCCATTCATTTTGTGATTAAGCACTATAAACACAT
320 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAAGCACTATAAACACAT
* *
23932 TCTGCTTATTAGGATAAACGATATGGATGATTTTCTATTGCATGGAAATCTTTTCTTTGCCCTAT
385 TCTCCTTATTAGGATAAACGATATTGATGATTTTCTATTGCATGGAAATCTTTTCTTTGCCCTAT
23997 TTTCCTTAAAATCAAAGTTCATCT
450 TTTCCTTAAAATCAAAGTTCATCT
* * * * * * *
24021 CTTAAAAAAGATAAGTATAGATTCTCGTAATAGTCTCCGTTCCTTTCAAGATTGGGAACCAAATA
1 CTTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAA-A
* * * * *
24086 TTCATTCCCTTCATTAGGATACATGACATTGACGCTTTGGTGTCGTAAGAACAGCTTCTCTTTCC
65 TGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCC
* * * * * * * *
24151 GCCGTTTTTGATAGAATGAAAGTTTATCCCTTAAATAAGACAAACATAAATAGTCACACGAATCC
130 ACCATTTTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCC
* ** * * *
24216 CATTCTTTTCAGGATTAGGCACTGTAAACGTAGTCTTCTTATTAGGATAAACGATATTGATGCTT
195 CATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTT
* * * *
24281 TGGTTTCGCAAAAAATGCTTTCTTCCCACCAATTTTTGTAAAGTC-AAATTCGTGCCTCAAATAA
260 TGGTTTC-TAAAAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGA
* * ** * * *
24345 GACAAATATGGATTCTAGAAATGATCTTCCCTCATTTTATGATTAGGCACTATAAACATATTCTC
324 GACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAAGCACTATAAACACATTCTC
* * * * * *
24410 CTTATTAGGATAAATGATATTCAAGATTTTCTTTTGCATGTAAATATTTTCTTTGCCCTAATTTT
389 CTTATTAGGATAAACGATATTGATGATTTTCTATTGCATGGAAATCTTTTCTTTGCCCT-ATTTT
* *
24475 -CTTAAAATCAAAGTTCGTCA
453 CCTTAAAATCAAAGTTCATCT
* * *
24495 CTTAAATCAGAAAAGCATCGATTCTCGTAACAGTTTCCATTCTTTTTAAGATTGGGAAGCCAAAA
1 CTTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAAA
* * * * *
24560 CGCATTCCCTTTATTAAGATACATGACATTAATGCATTT-GTGTCATAAGAAAAGCTTTTCTTTT
65 TGCATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCATAAGAAAAGCTTTTCTTTC
* * * * * *
24624 CACCATTTTTGATAGAATCAAAGTTTGTCTTTTAAATAAGACTAACATGAATATTGATACTAAAC
129 CACCATTTTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATC
* * * **
24689 CCTATTCTTTTCAAGATTAGTCACCATAAACATGGTCTTGTTGTTAGGATACACGATATTGATGC
194 CC-ATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * *
24754 TTTGGTATCTCCAAAAAGGTTTTATTCCCACAAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
258 TTTGGTTTCT-AAAAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAT
* * * * *
24819 AACACAAACATGGATTCTAGCAATGATCCTT-ATTCATTTTGTGATTAGGCACTGTAAACACATT
322 GAGACAAACATGGATTCTAGTAATGAT-CTTCATTCATTTTGTGATTAAGCACTATAAACACATT
** *
24883 C-CCTTATTAGGATAAACGATATTGATGATTTTCTATTATATGGAAATCTTTTCCTTGCCCTATT
386 CTCCTTATTAGGATAAACGATATTGATGATTTTCTATTGCATGGAAATCTTTTCTTTGCCCTATT
** * *
24947 TTTGTTAAAATTAAAGTTCATCC
451 TTCCTTAAAATCAAAGTTCATCT
* * * * * * *
24970 CTTAAATAAGAAAACCATCGATTCTTGTAACAATTTCCAATCTTTTCTAGGTTGGGAAGCCAAAA
1 CTTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAAA
* *
25035 -GACATTCCCTTCATTAGGATATATGACATTGATGCGTTT-GTGTCATAAGAAAAGCTTTTCTTA
65 TG-CATTCCCTTCATTAGGATACATGACATTGATGC-TTTGGTGTCATAAGAAAAGCTTTTCTTT
* * *** *
25098 CCACCGTTTTTGATAGAGTGAAACACAT-TCTCTTAAATAAGACTAACATGAATACTCATACTAA
128 CCACCATTTTTGATAGAATGAAA-GTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAA
* *
25162 TCTCCATTATTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATCGAT
192 TC-CCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGAT
* * * * * * * **
25227 GTTTTGGTTTCGTGAGAAAGGCTTTCTTACCACTAATTTTTGTAAAGTCTAAGTTTGTACCTTTA
256 GCTTTGGTTTC-TAAAAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAA
* *
25292 ATGAGACAAACATTGATTCTAGTAATGATCTTCACTCATTTTGTGATTAAGCACTATAAACACAT
320 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAAGCACTATAAACACAT
* *
25357 TCTCCTTATTAGGATAAACGATATTGATGATTTTCTATTGCATGAAAATCTTTTGTTTGCCCTAT
385 TCTCCTTATTAGGATAAACGATATTGATGATTTTCTATTGCATGGAAATCTTTTCTTTGCCCTAT
25422 TTTCCTTAAAATCAAAGTTCATCT
450 TTTCCTTAAAATCAAAGTTCATCT
* * * * * * * * *
25446 CTTAAAAAAGATAAGCATAGATTATCGCAACAATCTCCATTCCTTTCAAGATTAGGAAACAAGTA
1 CTTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACCAA--A
* * * ** *
25511 CT-CATTCCCTTTATTAGGATACATGACATTGATGCTTTGGTATTTTAAGAAAAGCTTTTCTTTG
64 ATGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTC
* * * *
25575 TACCATTTTT-TTAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATAATCACA-TCAAT
129 CACCATTTTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACT-AAT
* * * * *
25638 CCCCATTCTTTTCAAGATTAGGCACCGTAAACATAGTCTTCTCATTAGGATAAATGATGTTAATG
193 -CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
25703 CTTTGGTTTC
257 CTTTGGTTTC
25713 ACAAGAAACA
Statistics
Matches: 1824, Mismatches: 310, Indels: 69
0.83 0.14 0.03
Matches are distributed among these distances:
473 2 0.00
474 306 0.17
475 785 0.43
476 648 0.36
477 82 0.04
478 1 0.00
ACGTcount: A:0.32, C:0.17, G:0.14, T:0.37
Consensus pattern (473 bp):
CTTAAATAAGAAAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAT
GCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCA
CCATTTTTGATAGAATGAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCC
ATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTT
GGTTTCTAAAAAAGGCTTTCTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGA
CAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAAGCACTATAAACACATTCTCCT
TATTAGGATAAACGATATTGATGATTTTCTATTGCATGGAAATCTTTTCTTTGCCCTATTTTCCT
TAAAATCAAAGTTCATCT
Found at i:26784 original size:476 final size:473
Alignment explanation
Indices: 25810--28537 Score: 3033
Period size: 476 Copynumber: 5.8 Consensus size: 473
25800 AAGATGAGTG
** * * * *
25810 TCGATTCTCATAACAGTCTCTATT-TTTTTAAGATTGGGAACCAAAAACATATTCCCTTCATTAG
1 TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
25874 GATACATGACATT-ATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTTG-TAGAA
66 GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCA-TTTTTGATAGAA
* * * * * * * * *
25937 TCAAAGTTTGTCTCCTATATAAGAAAAAGATGAATAGTAATACTAATCTCTATTCTTTTTTA-GA
130 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC-TTTTCAGGA
* * ** * * * *
26001 TTAGACTCCATAAACATAGTCTTCTCAGAAGGATACACAATGTTGATGCTTTGGTTTTGTAACAA
194 TTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGTAAGAA
* * * *
26066 AGG-TTTTCTTCCTACCAATTTTTTTAAAGTCTAAGTTCGTACCTCAGATGAGA-AAAAATGGAT
259 AGGCTTTTC-TCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * * *
26129 TCTAGTAAAGATTTTCATTCATTTTGCGATTAAGAACTATAAACACATTCT-CTTCATTAGGATA
322 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTT-ATTAGGATA
* * * * *
26193 AATAAGATTGATGATTATCTTTTACATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAA
386 AATGATATTGATGATTTTCTTTTGCAT-GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * *
26258 GCTCATCCTTTAAATAAGACAAGCA
450 GTTCATCC-TTAAAAAAGAAAAGCA
* * * * *
26283 TCGATTCTTATAAAAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAACACATTCCCTTCTTTAG
1 TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
* * * * *
26348 GATACATGACATTAAAGCTTTGGTGTCACAAGAAAAGCTTTTCTTTTCACCATTTTTTATAGAAA
66 GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * * * *
26413 CAAATTTTATCTCTTAAATAAGAGAAACTTGAATACTCATACTAATCCCCATTCTTTTCAAGATT
131 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATT
* ** * * ** *
26478 AGGCGCTGTAAACATAGTCTTCTCCTTAGAATACATTATATTGATGCTTTGGTTTCATAAGAAAG
196 AGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGTAAGAAAG
* * * * * * * * *
26543 GCTTTTCTCACATCAATTTATGTAAAGTCTTAGTTCGTTTCC-CAAAGGAGATAATCATAGAGTC
261 GCTTTTCTC-CACCAATTTTTGTAAAGTCTAAGTTCG-TGCCTCAAATGAGACAAACATGGATTC
* * * *
26607 TAGTAATGATCTTCATTCATTTTGAGATTAAGCACTATAAAAACATTCTACTTATTAGGATAAAT
324 TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAAT
* * *
26672 GATATTGATGATTTTCTATTGCATGAAATTCTTTTCTTTGCCTTATTTTCCTTAAAATCAAATTT
389 GATATTGATGATTTTCTTTTGCATGAAA-TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTT
*
26737 CATCTCTTAAAAAAGATAAGCA
453 CATC-CTTAAAAAAGAAAAGCA
* * * * * ** *
26759 TAGATTCTTGTAACAATCTCCATTCTTTTCAAGATTAGGAACCAAATACTTATTCTCTTCATTAG
1 TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
* * ***
26824 GATACATGACATTGACGCTTTAGATGTTGTAA-AAAAGCTTTTCTTTCCACCATTTTTGATAGAA
66 GATACATGACATTGATGCTTT-GGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAA
* * * * ** * * *
26888 TGAAAGTTTGCCTCTTAAATAAGACAAACATGAATAGTCACAAGAATCCTCGTTCTTTTTAGGAT
130 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGAT
* * * * *
26953 TAGGCACCGTAAACATTGTCTTCTCATTAGGATAAATGATATTGATGCTTTGGTTTCGCAAGAAA
195 TAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGTAAGAAA
* * *
27018 CGC-TTTCTTCCTACCAATTTTTGTGAAGTC-AAGTTCGTGCCTCAAATAAGACAAACATGGATT
260 GGCTTTTC-TCC-ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATT
*
27081 CTAGTAATGATCTTTC-TCCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAA
323 CTAGTAATGATC-TTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAA
* * * *
27145 ATGATATTCAAGATTTTCTTTTACATGTAAATCTTTTCTTTGCCCTAATTT-CTTAAAAATCAAA
387 ATGATATTGATGATTTTCTTTTGCATG-AAATCTTTTCTTTGCCCTATTTTCCTT-AAAATCAAA
** *
27209 GTTTGTTCCTT--AAATGAAAAGCA
450 G-TTCATCCTTAAAAAAGAAAAGCA
* * * *
27232 TCGATTCTTGTAACAGTTTCCATTTTTTTCAAGATTGGGAAGCTAAAACACATTTCCTTCATTAG
1 TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
* * * *
27297 GATACATGACATTGATGCATTT-GTGTCATAAGAACAGCTTTTCTTTCCGCCGTTTTTGATAGAA
66 GATACATGACATTGATGC-TTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAA
* * * * * *
27361 TCAAAGTTTATCTATTAAATAAGACTAACATGAACACTCATACTAA-ACCCATTCTTTTGAGGAT
130 TCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGAT
* * * * * * *
27425 TAGGCACCATAAACATGGTCTGCTCGTTAGGATACACGATTTTTATTCTTTGGTATC-TCAAGAA
195 TAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGT-AAGAA
*
27489 AGGCTTCCTTC-CCACCAATTTTTGTAAAGTC-AAGTTCGTGCCTCAAATAAGACAAACATGGAT
259 AGGCTT--TTCTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * * *
27552 TCTAGTAATTATCTT-TTTCATTTTGAGATTAGGTACTATAAACACATTCTCCTCATTAGGATAA
322 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAA
* * * * * *
27616 ATGATTTTCAAGATTTTCTTTTGCATGTAAATCTTTCCTTTGCCCTAGTTTCCCTAAAATCAAAG
387 ATGATATTGATGATTTTCTTTTGCATG-AAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* *
27681 TTCATCCCTCAAAGAAGAAAAGCA
451 TTCAT-CCTTAAAAAAGAAAAGCA
* * * * *
27705 TCGATTCTCGTAACAGTTTTCATTCTTTTCAAGATTGGAAAGCCAAAACACATTCCCTTCATTAG
1 TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
* * * * * *
27770 GATACATGACATTGAAGCTTTTGTGTCGCAAGAAAAACTTTTCTTTCTACCGTTTTTGATAGAAT
66 GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
* * *
27835 CAAAGTTTGTCTCTTAAATAAGACTAACGTGAATACTCATACTAATCCCCATTGTTTTCAGGATT
131 CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATT
** * *
27900 AGGCTTCATAAACATAGTCTTCTCATTAAGATACACGATATTGATGCTTTGGTTTTGTAAGAAAG
196 AGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGTAAGAAAG
* * ** * *
27965 GCTTTATTTTCGTCAATTTTTGTAAAGTCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCC
261 GCTTT-TCTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT
* *
28030 AGTAATGATCCTT-ATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATATAC
325 AGTAATGAT-CTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAAT
* * * * * *
28094 GATATTGATGATTTTCTATTGCATGGAAATCTTTTTTTTGTCCTATTTTCCTTATAATAAAAATT
389 GATATTGATGATTTTCTTTTGCAT-GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTT
* * **
28159 CATCCCTTAAATATGCTAAGCA
453 CAT-CCTTAAAAAAGAAAAGCA
* * * * *
28181 TCGATTCTCGTAACAGTCTCCACTATTTTCAAGATTGGGAA-CGAAAAACGCATTCCCCTCATTA
1 TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGC-AAAAACACATTCCCTTCATTA
* * * *
28245 GGATACATGACATTGATGCCTTGGTGTCGCTAA-AAAAGTTTTTCTTTCCAACATTTTTGATAGA
65 GGATACATGACATTGATGCTTTGGTGTCAC-AAGAAAAGCTTTTCTTTCCACCATTTTTGATAGA
* * * * *
28309 ATCAAAGTTTG-CCCTTAAATAAGACAAACATGAATAGTCATACTAATCCCTATACTTTACAGGA
129 ATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGA
* * * * **
28373 TTAGGCACCATAAACATAGTCTTCACATAAGGATACAAGATATTGATGTTTTGGTTTCACAAGAA
194 TTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGTAAGAA
* * * * * *
28438 AGG-TATTTTTCTCACCAATTTTTGTAAAGTCTGAGTTTGTACCCCAAATGAGACTAACATGGAT
259 AGGCT-TTTCTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* *
28502 TCTAGTAATGATCTTCACTCACTTTGTGATTAGGCA
322 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA
28538 TTGTTTTCAC
Statistics
Matches: 1907, Mismatches: 305, Indels: 84
0.83 0.13 0.04
Matches are distributed among these distances:
470 3 0.00
471 106 0.06
472 142 0.07
473 334 0.18
474 163 0.09
475 534 0.28
476 612 0.32
477 13 0.01
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.37
Consensus pattern (473 bp):
TCGATTCTTGTAACAGTCTCCATTCTTTTCAAGATTGGGAAGCAAAAACACATTCCCTTCATTAG
GATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAAT
CAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATT
AGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGTAAGAAAG
GCTTTTCTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTA
GTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTTATTAGGATAAATGA
TATTGATGATTTTCTTTTGCATGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAT
CCTTAAAAAAGAAAAGCA
Found at i:28890 original size:381 final size:381
Alignment explanation
Indices: 28187--28893 Score: 1069
Period size: 381 Copynumber: 1.9 Consensus size: 381
28177 AGCATCGATT
*
28187 CTCGTAACAGTCTCCACTATTTTCAAGATTGGGAACGAAAAACGCATTCCCCTCATTAGGATACA
1 CTCGTAACAGTCTCCACTATTTTCAAGATTGGGAACGAAAAACACATTCCCCTCATTAGGATACA
** * *
28252 TGACATTGATGCCTTGGTGTCGCTAAAAAAGTTTTTCTTTCCAACATTTTTGATAGAATCAAAGT
66 AAACATTGATGCCTTGCTGTCGCTAAAAAAGTTGTTCTTTCCAACATTTTTGATAGAATCAAAGT
* *
28317 TTGCCCTTAAATAAGACAAACATGAATAGTCATACTAATCCCTATACTTTACAGGATTAGGCACC
131 TTGCCCTTAAATAAAACAAACATGAATAGTCATACTAATCCCCATACTTTACAGGATTAGGCACC
**
28382 ATAAACATAGTCTTCACATAAGGATACAAGATATTGATGTTTTGGTTTCACAAGAAAGGTATTTT
196 ATAAACATAGTCTTCACATAAGGATACAAGATATTGATACTTTGGTTTCACAAGAAAGGTATTTT
* * * * * *
28447 TCTCACCAATTTTTGTAAAGTCTGAGTTTGTACCCCAAATGAGACTAACATGGATTCTAGTAATG
261 TCACACCAATCTTTGTAAAGTCTAAGTTCGTACCCCAAATGAGACAAACAAGGATTCTAGTAATG
28512 ATCTTCACTCACTTTGTGATTAGGCATTGTTTTCACTAGAAAGGCTTTTTTTGATC
326 ATCTTCACTCACTTTGTGATTAGGCATTGTTTTCACTAGAAAGGCTTTTTTTGATC
* * * * * *
28568 CTCGTAACAGTCTCTATTCTTTTCAGGATTGGGAACTAAAAACACATT-CCCTTATTAGGATACA
1 CTCGTAACAGTCTCCACTATTTTCAAGATTGGGAACGAAAAACACATTCCCCTCATTAGGATACA
* *
28632 AAACATTGAT-CCTTTGCTGTCGCTAGAAAAGTTGTTCTTTCCAACATTTTTTATAGAATCAAAG
66 AAACATTGATGCC-TTGCTGTCGCTAAAAAAGTTGTTCTTTCCAACATTTTTGATAGAATCAAAG
* *
28696 TTTGTCTCTTAAATAAAACAAACATGAATAGTCATACTAATCCCCATACTTTTCAGGATTAGGCA
130 TTTG-CCCTTAAATAAAACAAACATGAATAGTCATACTAATCCCCATACTTTACAGGATTAGGCA
* * * * **
28761 CCATAAACATAGTCTTCTCCTTAGGATACATGATATTGATACTTTGGTTTCGTAAGAAAGGCT-T
194 CCATAAACATAGTCTTCACATAAGGATACAAGATATTGATACTTTGGTTTCACAAGAAAGG-TAT
* *
28825 TTTTCACACCAATCTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAAGGATTCTAGTA
258 TTTTCACACCAATCTTTGTAAAGTCTAAGTTCGTACCCCAAATGAGACAAACAAGGATTCTAGTA
28890 ATGA
323 ATGA
28894 CCACTATAAA
Statistics
Matches: 290, Mismatches: 33, Indels: 6
0.88 0.10 0.02
Matches are distributed among these distances:
379 2 0.01
380 74 0.26
381 213 0.73
382 1 0.00
ACGTcount: A:0.32, C:0.19, G:0.15, T:0.34
Consensus pattern (381 bp):
CTCGTAACAGTCTCCACTATTTTCAAGATTGGGAACGAAAAACACATTCCCCTCATTAGGATACA
AAACATTGATGCCTTGCTGTCGCTAAAAAAGTTGTTCTTTCCAACATTTTTGATAGAATCAAAGT
TTGCCCTTAAATAAAACAAACATGAATAGTCATACTAATCCCCATACTTTACAGGATTAGGCACC
ATAAACATAGTCTTCACATAAGGATACAAGATATTGATACTTTGGTTTCACAAGAAAGGTATTTT
TCACACCAATCTTTGTAAAGTCTAAGTTCGTACCCCAAATGAGACAAACAAGGATTCTAGTAATG
ATCTTCACTCACTTTGTGATTAGGCATTGTTTTCACTAGAAAGGCTTTTTTTGATC
Found at i:29806 original size:476 final size:475
Alignment explanation
Indices: 28897--32611 Score: 4105
Period size: 476 Copynumber: 7.8 Consensus size: 475
28887 GTAATGACCA
* * ** *
28897 CTATAAACACATTCTCCTTAGTAGGATACATTATATTAATGATTTTCTATTGCATTGAAATCTTT
1 CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
* * * *
28962 TCTTTGCACTATTTTCCTTAAAATCAAAGTTCATTCCC--ACTATAAGACGAGCATCGATTCTCG
66 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA-TCCCTTA-AATAAGACAAGCATCGATTCTCA
* * * * * **
29025 CAATAGTCTCTATTCTTTTGAAGATTAGGAAGCTAAAATGCATTCCCTT-AGTTAGGATACATGA
129 TAACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCA-TTAGGATACATGA
* * * * * *
29089 CATTGATGCTTTCGTTTCGCAAGAAAAACTTTGCTTTCCACCATTTTTTATAGAATCAAAGTTTG
193 CATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTA
* * *
29154 TCTCTCAAATAAGA-TAAACATGAATACTCATACTAATCCCCAATCTTTTAAGGATTAGGCACCA
258 TCTCTTAAATAAGACT-AACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * * * * *
29218 TAAACATAGTTTTTTCATTAGGAGACACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTATT
322 TAAACATAGTCTTCTAATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTT-TT
* *
29283 CCCACTAATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGATTCTAGTAATGA
386 CCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGA
*
29348 TCCTT-ATTCATTTTGTGATTAGACT
451 T-CTTCATTCATTTTGTGATTAGGCT
* * *
29373 GTATAAACACATTCTCCTTATTAGGATAAACGACATTGATGATTTTCTATTGCATGGAAATCTTT
1 CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
* * * *
29438 TCCTTGCCCTATTTTCATTAAAATCAAAGTTCATCCCTTAAATAAGACAACCATCGATTTTCATA
66 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATA
* * * * *
29503 ACAATCTCCATTCTTTTCCAGATTGGGAAGCCAAAACACATTCCTTTCATTTA-GATATATGACA
131 ACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCA-TTAGGATACATGACA
* * * *
29567 TTCATGCTTTAGTGTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAAGCTTATC
195 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATC
* * * *
29632 TCTCAAATAAGACTAACATGAATACTCATACTAAACCCCATTCTTTTTAGGGTTAGGCACCATAA
260 TCTTAAATAAGACTAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAA
* * **
29697 ACATAGTCTTCTAATTAGGATACGCGATATTAATGCTTTGGTTTCGCAAGAAAGGCTTTCCACCC
325 ACATAGTCTTCTAATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTT-TTCCC
** * ** *
29762 ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTTAATGGGACAAACATTAAGTCTAGTAAAT-ATC
389 ACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT-AATGATC
* * *
29826 TTCATTTATTTTGCGATTTGGCAT
453 TTCATTCATTTTGTGATTAGGC-T
* * * *
29850 -TATAAACACATTCTCCTTATTAGGATGAACGATATTGATGATATTCTATTGCATGAAAATCTTT
1 CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
*** * * * * *
29914 TCTTTATTCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAAAAAGATAAGTATAGATTCTCGTA
66 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATA
* * * * * * *
29979 ACAGGCTCCATTCATTTCAAGATTGGCAACCAAAAACTCACTCCCTTCATTAGGATACATGACAT
131 ACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACAT
* * ** *
30044 TGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATGGAAGTTTACCT
196 TGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCT
* * * * * * * *
30109 CTTAAATAAGACAAACACGAATAGTCACA-TGAATCCCTATTCTTTTCAAGATTAGGTACCGTAA
261 CTTAAATAAGACTAACATGAATACTCATACT-AATCCCCATTCTTTTCAGGATTAGGCACCATAA
* * * *
30173 ACATAGTCTTCTCATTTA-GATAAATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCATCC
325 ACATAGTCTTCT-AATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTT-TTCC
** * * * *
30237 CACCAATTTTTGTAAAGTC-AAG-TCCAGCCTCAAATAAGATAAACATGGATACTAGTGATGATC
388 CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATC
* *
30300 TTCCTTCATTTTGTGATTAGGCG
453 TTCATTCATTTTGTGATTAGGCT
30323 CTAT-AACACATTCTCCTTATTAGGATAAACGATATTAATGA-TTTCTATTGCATGGAAATCTTT
1 CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
* ** ** * * * * *
30386 TCATTATCCTACATTCCTTAAAATTAAAGTTCATCCTTTAAATATGACAAGCGTAGATTCTCATA
66 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATA
* * * * * * *
30451 ACAGTCTCTATTCTTTTCAAGATTGGGAACCAAAAACATATTTCCTTTATTAGGATATATGACAT
131 ACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACAT
* * * * * *
30516 TGATGGTTTGGTGTCTCTAGAAAAGCTTTTCTTTCCATCATTTTTAATAGAATCAAAGTTTGTCT
196 TGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCT
* *
30581 CTTAAATAAGACTAACAAGAATACTCATACTAAACCCCATTCTTTTCAGGATTAGGCACCATAAA
261 CTTAAATAAGACTAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
* ** *
30646 CATAGTCTTTTCGTTATGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTT-CCA
326 CATAGTCTTCTAATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTCCCA
* * * * *
30710 CTAACTTTTGCAAAGCCTAAGTTCGTGCCTCAAATGAGACAAACGTGGATTCTAGTAATGATCTT
390 CCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
30775 CATTCATTTTGTGATTAGG-T
455 CATTCATTTTGTGATTAGGCT
** * * * * * * *
30795 ACTATAAACGTATTCTCCTTGTCAAGATAAATGATACTAATGATTTTCTTTTGCATGGAAATATT
1 -CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTT
* * * * *
30860 TT-TTTGCCTTATTTTCCTTAAAGTCAAAGTTCGTCCCATAAATAAGACAAGCATCGATTCTTAT
65 TTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCAT
* *** * * * * * *
30924 AACAGACTTTTTTCTTTTCATGATTGGGAGGCAAAAATACATTCCCTTCATTAGGATAGAAGACA
130 AACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACA
* * * *
30989 TTGATGACTTAGGTGTTGCAAGAAAAGTTTTTCTTT-CACCATTTTTTATAGAATCAAAGTTTAT
195 TTGATG-CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTAT
* *
31053 CTCTTAAATAAGACATACACA--AATACTCATACTAATCCCCATTCTTTTAAAGATTAGGCACCA
259 CTCTTAAATAAGAC-TA-ACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * *
31116 TAAAC-TCAGTCATC-ACATTAAGATACATGATATTGAT-CTTTGTGTTT-GCAAGAAAGGCATT
322 TAAACAT-AGTCTTCTA-ATTAGGATACACGATATTGATGCTTTG-GTTTCGCAAGAAAGGC-TT
* * * * * *
31177 TTTCCTACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATAAGCCAAATATGGATTCTTGTAA
383 TTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA
* *
31242 TGATCTTTATTCATTTTGTGATTAGGCA
448 TGATCTTCATTCATTTTGTGATTAGGCT
* * * * * *
31270 CCATAAACACATTCTCCTCATTAGGATAAATC-ATATTGATGATTTTCTTTTTCATGGAAATATT
1 CTATAAACACATTCTCCTTATTAGGATAAA-CGATATTAATGATTTTCTATTGCATGGAAATCTT
* * * * *
31334 TTCCTTGCCCTATTTTCCTTAAAATAAAAGTTCATCCTTTAAATAAGACACGCATTGATTCTCAT
65 TTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCAT
** * * * * **
31399 AACAGTCTGTATTCTTTTAAAGATTTGGAAGCTAAAACTCATTCCCTTCTTTAGGATACATGATG
130 AACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACA
** * * *
31464 TTGATGCTTTGGTGTCATAAAAAAAAGCTTTTCTTGCCACCATTTTT-ATAGAATCAACA-TTTG
195 TTGATGCTTTGGTGTC-GCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAA-AGTTTA
* * *
31527 TCTCTTAAATAAGAC-AAGCATGAATACTCAAACTAATCCGCATTCTTTTCAGGATTAGGCAGCA
258 TCTCTTAAATAAGACTAA-CATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * * *
31591 TAAACGTAGTCTTC-ACATTAGGACACACGATATTGATGCTTTGGTTTCGCATGAAAGGTATTTT
322 TAAACATAGTCTTCTA-ATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGG-CTTTT
* * * * ** * *
31655 TGCCACCAGTTTTTATAAAGCCTAAGTAT-GTGCCTCAAATGAGGTAAACATGGGTTCTTG-AAT
385 TCCCACCAATTTTTGTAAAGTCTAAGT-TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAA-
31718 TGATCTTCATTCATTTTGTGATTAGGCT
448 TGATCTTCATTCATTTTGTGATTAGGCT
* * * * * * *
31746 CTATAAACATATTCTCCTCATTAGGATAAATGTTGTTGATGATTTTCTTTTGCATGGAAATCTTT
1 CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
* * * *
31811 TCTATGCCCTATTTTTCTTAAGATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTGTCATA
66 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATA
* * * * ** * *
31876 ATAGTCTCCATTCCTTTAAAGATTAGGAAGCTAAAATGCATTCCCTTCTTTAGGATACATGATAT
131 ACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACAT
* * * * *
31941 TAATGCTTTGGTGTTGTAAGAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTTGTCT
196 TGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCT
** * *
32006 CTTAAATAAGAGAAACATGAATACTCATACTAATCCCCATT-TTTTTAAGATTAGGCACCATAAA
261 CTTAAATAAGACTAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
* ** * * * * *
32070 CGTAGTCTTCTCCTAAGGATACACGATATTGATGCTTTGATTTCTCAAGAAAAGCTTTTTTCACA
326 CATAGTCTTCTAATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTCCCA
* * * * * * * *
32135 GCAATTTTTGTAAAGTTTATGTTCGTGTCTCAAATTAGACAAACATGGATACTAATAGTGATCTT
390 CCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTT
** *
32200 CATTCATTTTGCAATTAGGCA
455 CATTCATTTTGTGATTAGGCT
* * ** *
32221 CTATAAACACATTCTACTCATTTTG-T-----ATATTAATGATTTT-T-TT-CATGAAAATCTTT
1 CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
* * * * **
32277 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAACCCTTAAATAAGACGAGAATCAATTCTTGTA
66 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATA
* * * * *
32342 ACAATCTCCATTCTTTTGAAGATTAGGAAGGTAAAACGCATTCCCTTCATTAGGATACATGACAT
131 ACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACAT
* * *
32407 TGATGCTTTGGTGTCGTAAGAAAAGCTTTTCTTTCCTCCATTTTTTTATAGAATCAAAGTTTATC
196 TGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTGATAGAATCAAAGTTTATC
** * * * ** * *
32472 TCTTAAATAAGA-TAAGCACAAATACTTAAACAAATCCCCATTCTTTTTGGGATTAGGTAGCATA
260 TCTTAAATAAGACTAA-CATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATA
*
32536 AACATAGTCTTC-ACATTAGGATACACAATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTC
324 AACATAGTCTTCTA-ATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGC-TTTTTC
32600 CCACCAATTTTT
387 CCACCAATTTTT
32612 ATTCTTGTAA
Statistics
Matches: 2729, Mismatches: 456, Indels: 116
0.83 0.14 0.04
Matches are distributed among these distances:
466 163 0.06
467 56 0.02
468 82 0.03
469 11 0.00
471 19 0.01
472 287 0.11
473 125 0.05
474 432 0.16
475 468 0.17
476 1069 0.39
477 17 0.01
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.37
Consensus pattern (475 bp):
CTATAAACACATTCTCCTTATTAGGATAAACGATATTAATGATTTTCTATTGCATGGAAATCTTT
TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATA
ACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACACATTCCCTTCATTAGGATACATGACAT
TGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCT
CTTAAATAAGACTAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA
CATAGTCTTCTAATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTCCCAC
CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTC
ATTCATTTTGTGATTAGGCT
Found at i:34861 original size:78 final size:79
Alignment explanation
Indices: 34512--34864 Score: 410
Period size: 79 Copynumber: 4.5 Consensus size: 79
34502 TTATTTCACC
* * * *
34512 ATCGGGGATATTCCAACCTCATTATTTTCGAGGGGATACTCCAACC-CTA-GTTTA-TTTCAAAA
1 ATCGAGGATACTCCAACCCCGTTATTTTCGAGGGGATACTCCAACCTC-AGGTTTATTTTCAAAA
**
34574 CACATATTTTCCACA
65 CACCGATTTTCCACA
* * * * **
34589 ATCAAGGATACTCCAACCCCGTTATTTTTGAGAGGATACTCTAACCTCAATTTTATTTTCAAAAC
1 ATCGAGGATACTCCAACCCCGTTATTTTCGAGGGGATACTCCAACCTCAGGTTTATTTTCAAAAC
*
34654 ACCGATTTTCCATA
66 ACCGATTTTCCACA
* * * * *
34668 ATCGGGGATACACAAACCCCGTTATTTTCGAGGGGCTACTCCAACGTC-GGTTTTATTTTCAAAA
1 ATCGAGGATACTCCAACCCCGTTATTTTCGAGGGGATACTCCAACCTCAGG-TTTATTTTCAAAA
* * *
34732 CATCAATTTTCCATA
65 CACCGATTTTCCACA
* *
34747 ATTGAGGATACTCCAACCCCGTTATTTTCGAAGGGATACTCCAACCTCAGGTTTATTTTCAAAAC
1 ATCGAGGATACTCCAACCCCGTTATTTTCGAGGGGATACTCCAACCTCAGGTTTATTTTCAAAAC
* *
34812 ACCGATTTTTCACC
66 ACCGATTTTCCACA
* *
34826 A-CCAGGATACTCCAACCCCGTTATTTTCGCGGGGATACT
1 ATCGAGGATACTCCAACCCCGTTATTTTCGAGGGGATACT
34865 TCGACCCTAT
Statistics
Matches: 230, Mismatches: 41, Indels: 9
0.82 0.15 0.03
Matches are distributed among these distances:
77 39 0.17
78 39 0.17
79 150 0.65
80 2 0.01
ACGTcount: A:0.29, C:0.25, G:0.14, T:0.32
Consensus pattern (79 bp):
ATCGAGGATACTCCAACCCCGTTATTTTCGAGGGGATACTCCAACCTCAGGTTTATTTTCAAAAC
ACCGATTTTCCACA
Found at i:35900 original size:21 final size:21
Alignment explanation
Indices: 35875--35917 Score: 68
Period size: 21 Copynumber: 2.0 Consensus size: 21
35865 ATGATACATG
35875 ACATTTATGCCATGGTCTCGC
1 ACATTTATGCCATGGTCTCGC
* *
35896 ACATTTATGCCTTGGTGTCGC
1 ACATTTATGCCATGGTCTCGC
35917 A
1 A
35918 AGAAAAGCTT
Statistics
Matches: 20, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.19, C:0.26, G:0.21, T:0.35
Consensus pattern (21 bp):
ACATTTATGCCATGGTCTCGC
Found at i:37995 original size:474 final size:476
Alignment explanation
Indices: 35896--41227 Score: 6015
Period size: 474 Copynumber: 11.3 Consensus size: 476
35886 ATGGTCTCGC
* * *
35896 ACATTTATGCCTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTAGATAGAATCAAAGTTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* * *
35961 GTCTCTTAAATAAGAAAAACATGAATAATCATACTAATCTCCATTCTTTTCTA-GATTAGGCACC
66 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACC
* * *
36025 ATAAACATAGTCTTCTCATAAGGATACACGATATTGATACTTTGGTTTTGCAAGAAAGGCATTTT
130 ATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTT
* ** * *
36090 TCCCACCAATTTTTGTAAAGCCTAAGTTCATGCCTTAAATGAGACAAACATGGATTCTTGCAATG
195 TCACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAATG
* ** *
36155 ATTTTCATTCATTTTGTGATTAGGCACCATAAACACATACTCCTTATTAGGATAAATGATATTGA
260 ATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATTGA
* * * *
36220 TGA-TTT-TTTTCCATGAAAATCTTTCCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACTT
325 TGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTT
* ** * * * *
36283 AAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTTGGAACCAAAAATAC
390 AAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAACAC
* ** ** * *
36348 CTTTACTTCATTAGGAGACAAG
455 ATTCCCTTTTTTAGGATACATG
* * * * * *
36370 ACATTGATACTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTTCATAAAATCAAGGTTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* * * * *
36435 GTCTCTCAAGATAA-AC--AC--GAAAACTCATACGAATCCCCATTCTTTTCAAGATT-GAGCAG
66 GTCTCTTAA-ATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAG-GCAC
** * * *
36494 CATAAACATAGTCTTCAAATTAGGACACATGATATTGATGCTTTGGATTT-GCAAGAAAGGCCTT
129 CATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGG-TTTCGCAAGAAAGGCATT
* * * * *
36558 TTTCACACCAATTTTTGTAAAGTCTAAATTCATGT-CC-CAAATGAGACAAACATGCACTCTAGT
193 TTTCACACCAATTTTTGTAAAGCCTAAGTT--TGTGCCTCAAATGAGACAAACATGGATTCTTGT
* * * * *
36621 AATGATCTTCATTCATTTTGTAATTAGGCACTATAAACACA--TT-CTCATTAAGATAATTTATA
256 AATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATA
* *
36683 TTGATGATTTTC-TTTCACATGCAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTCA
321 TTGATGATTTTCTTTTCA-ATG-GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA
* *
36747 TCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTTGGTAGCTA
384 TCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTA
** *
36812 AAATGCATTCCCTTTTTTAGCATACATG
449 AAACACATTCCCTTTTTTAGGATACATG
* * * * *
36840 ACATTGATGCTTTTGTGTCACAAGAAAAGCTTTTCTTTCCACC-TTTTATGATAGTATCAAGGTA
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTT-TGATAGAATCAAAGTT
* * ** **
36904 TGTCTCCTAAGTAAGACAAACATGAATACTCATACTAATCTTCATTCTTTTCAAAATTAGGCACC
65 TGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACC
* * * * ** * * ** * *
36969 ATAAACATAGTCTTCACAATAAGATATATAATATTAATGCCTTGGTTTCATAAGAAAAGTATTTT
130 ATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTT
* * * * *
37034 TCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATAAGACAAAAATAGATTCTTATAATG
195 TCACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAATG
*
37099 ATCTTCATTCATTTTTTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATTGA
260 ATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATTGA
* *
37164 TGATTTTCTTTTCAATGGAAATCTTTTCTTTACCCTATTTTCTTTAAAATCAAAGTTCATCCCTT
325 TGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTT
* ** *
37229 AAATAAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTTAAAGATTTAGCAGCTAAAACAC
390 AAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAACAC
* *
37294 ATTCCCTTCTTTAGGATACTTG
455 ATTCCCTTTTTTAGGATACATG
* * * *
37316 ATATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCCATCATTTTTGATAGAATCAAGGTTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* * * * *
37381 GTCTCCTAAGTAAGACAAACATGAACACTCATACTAATCCTCATTCTTTTCAAGATTAGG-ACCA
66 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * * * * * * *
37445 TAAATATTGTCTTCAT-ATTAAGATATACGATATTAAGGCTTTGGTTTCGTAAGAAAAGCATTTT
131 TAAACATAGTCTTC-TCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTT
* * * * *
37509 TCGCACCAATTTTTGAAAAGCCTAAGTTTGTGCCTCAAATAAGACAAACATAGATTCTTCTAATG
195 TCACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAATG
* * * * * *
37574 ACCTTTATTCATTTTGTGATTTGGCACCATCATCACATTTTCCTCATTAGGATAAATGATATTGT
260 ATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATTGA
* * *
37639 TAATTTTCTTTTCAATGGAAATATTTTCTTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCCTT
325 TGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTT
* * *
37704 GATTAA-ACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAATCTAAAACAC
390 AAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAACAC
*
37768 TTTCCCTTTTTTAGGATACATG
455 ATTCCCTTTTTTAGGATACATG
* * * * **
37790 ATATTCATGCTTTGATGTCACAAGAAAAGCTTTTCTTTTTACCATTTTTGATAGAATCAAAGTTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* * *
37855 GTCTCTTAAATAAGAC-AATATGAATACTTATACTAATCCCCATTCTTCTCAGGATTAGGCACCA
66 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * * * * * *
37919 TAAACAAAGTCTTCTCCTTAGGATATATGATATTAATGCTTTGGTTTTGCAAGAAAGGCCTTTTT
131 TAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTT
* * * * * * * *
37984 CACAACAATTTTCGTAAAGCCTAAGCTTATACCCCAAATGAGATAAACATGGATTCTAGTAATGA
196 CACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAATGA
* * ** *
38049 TCTTCATTCATTTTGTAATTAGGCACTATAAATGCA---T--TC--TAGGATAAATTG-TACTGA
261 TCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAA-TGATATTGA
* * * *
38106 TGATTTTCTTTTCCATGGAAATCTTTTCCTTGCCCTATTTTCCTTGAAATCAAAGTTCAACCCTT
325 TGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTT
** * * * * **
38171 AAATAAGACGGGGATCGATTCTCGTAACGGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAACTT
390 AAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAACAC
* *
38236 ATT-CCTTTCATTACGATACATG
455 ATTCCCTTT-TTTAGGATACATG
* * * * *
38258 ACGTTGATGCTTTGGTGTCGTAAGAAAAGCTTTTTTTTCCACCATTTTTTTATAAAAT-AAAGGT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTGATAGAATCAAA-GT
* * ** * * * * * * * *
38322 TTATCTTTTAAATAAGACAAACACAAACACTCAAACTAATACCTATTTTTTTTAGGATAAGGCAG
64 TTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCAC
* * * * *
38387 CATAAACATAATCTTCACATTCGGATACACGATATTGATGCTTTGGTTTCACAAGAAA-GTATTT
129 CATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
* ** *
38451 TTCCCACCAATTTACGTGAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAAT
194 TTCACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAAT
* *** *
38516 GATCTTCACTCATTTTGTGATTAGGCTTAATAAACACATTCTCCTC-TTACGGATAAATGATATT
259 GATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTA-GGATAAATGATATT
* * *
38580 GATGATTTTCTTTACAATGAAAATCTTTTCTTTGCCCTATTTTCC-T-AAATCAATGTTCATCGC
323 GATGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATC-C
* ** ** * *
38643 C-TAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTTGAGATT-TAAAACCAATA
387 CTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAA-A
* * ** * *
38706 ACACCTTCACTTCATTAGGAGACAGG
451 ACACATTCCCTTTTTTAGGATACATG
* * * * *
38732 ACATTGACGCTTTGGTGTCGCAAGAAAAGCTTTTGTTTCCACAATTTTTTATAGAATCAAGGTTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* * *
38797 GTCTCTTAAGTAAGACAAACATGAATACCCATACTAATCCCCATTCTTTTAAGGATTAGGCACCA
66 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * * * *
38862 TAAACATAGTCTTCTTC-TTAGGATACATGATATAGATGCTTTCGTTTCGCAAAAAAGGCTTTTT
131 TAAACATAGTCTTC-TCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTT
* * * *
38926 TCACACTAATTTTTATAAAGTCC-AAATTCGTGTGTCC-CAAATGAGACAAACATGGATTCTAGT
195 TCACACCAATTTTTGTAAAG-CCTAAGTT--TGTG-CCTCAAATGAGACAAACATGGATTCTTGT
* * * * *
38989 GATGATCTTCATTCATTTTGTAATTAGGCACTATAAATAC-TTTCTCCTCATTAGGATAAATTAT
256 AATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTT-TCCTCATTAGGATAAATGAT
* * * * *
39053 ATTGATGATTTTTTTTTCCATGGAGATCTTTTCATTGCCCTATTTTCCTTAAAATCAAAGTTAAT
320 ATTGATGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAT
*** * * * *
39118 CCCTTAAATAAGATGGGGATCGATTCGT-GCAACAGTCTCTATTCTTTTTAAGATTGGGAAGCTA
385 CCCTTAAATAAGACAAGCATCGATTC-TCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTA
** *
39182 AAATGCATT-CCTTTCCTTAGGATACATG
449 AAACACATTCCCTTT-TTTAGGATACATG
* * * * *
39210 ACATTGAAGCTTTGGGGTCGTAAG--AA-------TTTCCATCATTTTTTTATAGAATCAAAGTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTGATAGAATCAAAGTT
* * ** * * * *
39266 TATCTCTTAAATAAGACAAATACAAATACTCA-A-AAAACCCCATTCTTTTCAAGATTAGGCAGC
65 TGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACC
*
39329 ATAAACATAGTCTT-TACATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
130 ATAAACATAGTCTTCT-CATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
* * * * * *
39393 TTCCCACTATTTTTTGTAAAGCCTAAGTTCGTGCCTCAAATGAAATAAACATGGATTCTTGTTAA
194 TTCACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTG-TAA
* *
39458 -GATTTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCAATAGGATAAATGATATT
258 TGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATT
* * * * *
39522 CATGATTTTATTTTCCATGAAAATCTTTTCTTTGCCCTATTTTCTTTAAAATCAAAGTTCATCCC
323 GATGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCC
* * * * * * *
39587 TTAAATAAGACGAGGATCAACTCTTGTAACAGTCTTCATTCTTTTGAAGATTGGGAAGCTAAAAC
388 TTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAAC
* ** *
39652 GCATTCCCTTCATTACGATACATG
453 ACATTCCCTTTTTTAGGATACATG
* ** * *
39676 ACATTAATGCTTTGGTGTCATAAGAAAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGCTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* ** * * * *
39741 ATCTCTTAAATAAGACAAACACAAACACTCAAACAAATCCCCATTCTTTTCAGGATTAGGCAACA
66 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
* * *
39806 TAAACATAATCTT-TACATTAGGATACACGATATTGATGCTTTAGTTTCGCAAGAAAGGCCTTTT
131 TAAACATAGTCTTCT-CATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTT
* * * **
39870 TCACACCAATTTTTGTAAAGCCTAAATCATGT-CC-CAAATGAGACAAACTTGGATTCTACTAAT
195 TCACACCAATTTTTGTAAAGCCTAAGT-TTGTGCCTCAAATGAGACAAACATGGATTCTTGTAAT
** * * * * **
39933 GATCTTCATTTTTTTTGTAATTAGGCACTATAAACACA--TT-CTCATTAAGATAATTTCTATTG
259 GATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATTG
* * * *
39995 ATGATTTTCTTTTCAATGCAAAATCTTTTCTTTACCCTATTTACCTTAAAATCAAAGGTCATCCC
324 ATGATTTTCTTTTCAATG-GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCC
* * *
40060 TTAAATAAAACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTTGGTAGCTAAAAC
388 TTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAAC
* *
40125 GCATTCCCTTTTTTAGCATACATG
453 ACATTCCCTTTTTTAGGATACATG
*
40149 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACC-TTTTCTGATAGAATCAAGGTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTT-TGATAGAATCAAAGTT
* * *
40213 TGTCTC----CTAAGACAAACTTGAATACTCATAC---T----A---TTTT-AGGAATAGGCACC
65 TGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACC
* * * * * *
40263 ATAAACATAGTCTT-TAGATTAGGATACACGACATTAATGTTTTGGTTTCACAAGAAAAGCA-TT
130 ATAAACATAGTCTTCT-CATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT
* * *
40326 TTC-CTACCAATTTTTGTAAAGCCTAAGTTCGTGCCTCAAATGAAATAAACATGGATTCTTGTAA
194 TTCAC-ACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAA
* * * * * *
40390 TGATCTTCAATCATTTTCTGA-TAGACACCATAAACACATTCTCCGCTTTAGGATAAATGATATT
258 TGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATT
*
40454 GATGATTTTCTTTTCAATGGAAATCCTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCC
323 GATGATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCC
** *
40519 TTAAATAAGACAAATATCGATTCTCGTAACAGTCTCCGTTCTTTTAAAGATTGGGAAGCTAAAAC
388 TTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAAC
* *
40584 GCATT-CCTTTCTTTAGTATACATG
453 ACATTCCCTTT-TTTAGGATACATG
*
40608 ATATTGATGCTTTTGGTG-C-CATATGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAG
1 ACATTGATGC-TTTGGTGTCGCA-A-GAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAG
* *
40671 TTTGTCTCTTAAGTAAGACAAACATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCA
63 TTTGTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCA
* * *
40736 CCATAAACATAGTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGTAATGCATT
128 CCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATT
*
40801 TTTCTA-ACCAA-TTCTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTA
193 TTTC-ACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTA
* *
40864 ATGATCTTCATTCATTTTGTGATTAGGTACCATAAACACATTTTCCTCAATAGGATAAATGATAT
257 ATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATAT
* * ** * * *
40929 TGACGATTTTTTTTTTC-ATGGAAAAATTTTCTTTG-CCT-TTTTCCCTAAAAATCATAGTTGAT
322 TGATGA-TTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTT-CCTTAAAATCAAAGTTCAT
* * * *
40991 CCCTTAAATAAGACAAGCATCGATTTTCGTAATAGTCTCTATTCTTTTCAAGATTGGGAAGCTAA
385 CCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAA
* *
41056 AACATATTCCCTTCTTTAGGATACATG
450 AACACATTCCCTTTTTTAGGATACATG
* * * * * *
41083 ATATTGATGTTTTGGTGTCGTAAGAAAAGTTTTTGTTTCCACCATTTTTGATGGAATCAAAGTTT
1 ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
* * * * *
41148 ATCTCTTAAATAAGACAAATATGAATATTTATACTAATCCCCATTCTTCTT-AAG-TTAGGCACC
66 GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTT-TTCAGGATTAGGCACC
* *
41211 ATAAAAAAAGTCTTCTC
130 ATAAACATAGTCTTCTC
41228 TTTATTGTGA
Statistics
Matches: 4119, Mismatches: 618, Indels: 243
0.83 0.12 0.05
Matches are distributed among these distances:
456 3 0.00
457 44 0.01
458 109 0.03
459 133 0.03
460 82 0.02
461 4 0.00
462 1 0.00
464 23 0.01
465 3 0.00
466 229 0.06
467 115 0.03
468 215 0.05
469 160 0.04
470 477 0.12
471 7 0.00
472 45 0.01
473 361 0.09
474 796 0.19
475 561 0.14
476 593 0.14
477 57 0.01
478 95 0.02
479 6 0.00
ACGTcount: A:0.32, C:0.18, G:0.13, T:0.36
Consensus pattern (476 bp):
ACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTT
GTCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCA
TAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTT
CACACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTTGTAATGA
TCTTCATTCATTTTGTGATTAGGCACCATAAACACATTTTCCTCATTAGGATAAATGATATTGAT
GATTTTCTTTTCAATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTA
AATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAACACA
TTCCCTTTTTTAGGATACATG
Found at i:41958 original size:794 final size:796
Alignment explanation
Indices: 40441--42007 Score: 2024
Period size: 794 Copynumber: 2.0 Consensus size: 796
40431 TCCGCTTTAG
* * * *
40441 GATAAATGATATTGATGATTTTCTTTTCAATGGAAATCCTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATCATACTGATGATTTTCTTTTCAATGAAAATCCTTTCTTTACCCTATTTTCCTTAAAAT
* * *
40506 CAAAGTTCATCCCTTAAATAAGACAAATATCGATTCTCGTAACAGTCTCCGTTCTTTTAAAGATT
66 CAAAGATCATCCCTTAAATAAGACAAATATCGATTCTCGTAACAGTCTCCATTCTCTTAAAGATT
* * * * *
40571 GGGAAGCTAAAACGCATTCCTTTCTTTAGTATACATGATATTGATGCTTTTGGTGCCATATGAAA
131 GAGAAGCTAAAACGCATTCCTTTCATTAGGATACATGACATTGATGCTTTTGGTGCCATAAGAAA
* * * ** *
40636 AGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATGAATA
196 AGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCCTAAATAAGACAAACACAAAAA
* *
40701 CTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCACATTAGGATACA
261 CTCATACAAATCCCTATTCTTTTCAGAATTAGGCACCATAAACATAGTCTTCACATTAGGATACA
* * * * *
40766 CGATATTGATGCTTTGGTTTCGCAAGTAATGCATTTTTCTAACCAATTCTGTAAAGCCTAAGTTT
326 CGATACTGATGCTTTGGTTTCGAAAGAAATGCATTTTTCGAACCAATTCTGTAAAGCCGAAGTTT
* * *
40831 GTGCCTCAAATGAGACAAACATGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAGGTACCA
391 GTGCCTCAAATAAAACAAACATGGATTCTTGTAATGATCTTCACTCATTTTGTGATTAGGTACCA
* * * *
40896 TAAACACATTTTCCTCAATAGGATAAATGATATTGACGATTTTTTTTTTCATGGAAAAATTTTCT
456 TAAACACATTCTCCTCAATAGGATAAATGATATTGACGATTTTCTTTTCCATCGAAAAATTTTCT
* * * * *
40961 TTGCCTTTTTCCCTAAAAATCATAGTTGATCCCTTAAATAAGACAAGCATCGATTTTCGTAATAG
521 TCGCCTTTTTCCCTAAAAATCATAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAATAG
* ** * * * * ** * * *
41026 TCTCTATTCTTTTCAAGATTGGGAAGCTAAAACATATTCCCTTCTTTAGGATACATGATATTGAT
586 CCTCTATTCTTTTCAAGATTCAGAACCAAAAACACATTCACTTAATTAGGAGACAAGACATTGAT
* * * *
41091 GTTTTGGTGTCGTAAGAAAAGTTTTTGTTTCCACCATTTTTGATGGAATCAAAGTTTATCTCTTA
651 GTTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCTTA
* *** *
41156 AATAAGACAAATATGAATATTTATACTAATCCCCATTCTTCTTAAG-TTAGGCACCATAAAAAAA
716 AATAAGACAAACATGAATACGCATACTAAACCCCATTCTTCTTAAGATTAGGCACCATAAAAAAA
41220 GTCTTCTCTTTATTGT
781 GTCTTCTCTTTATTGT
** * *
41236 GATAAATCATACTGATGATTTTCTTTTCCTTGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
1 GATAAATCATACTGATGATTTTCTTTTCAATGAAAATCCTTTCTTTACCCTATTTTCCTTAAAAT
** * *
41301 CAAAGATCATTTCTTAAATAAGATGACAAT-T-GATTCTTGTAACAGTCTCCATTCTCTTAAAGA
66 CAAAGATCATCCCTTAAATAAGA-CA-AATATCGATTCTCGTAACAGTCTCCATTCTCTTAAAGA
*
41364 TTGAGAAGCTAAAACAG-ATTCCTTTCATTAGGATACATGACATTGATGC-TTTGGTGTCATAAG
129 TTGAGAAGCTAAAAC-GCATTCCTTTCATTAGGATACATGACATTGATGCTTTTGGTGCCATAAG
* *
41427 AGAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTATCTCCTAAATAAGACAAACACAA
193 AAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCCTAAATAAGACAAACACAA
* * * * * *
41492 AAACTTA-ACAAATCTC-GTTCTTTTCAGAATTAGGTAGCATAAACATAGTCTTCACATTATGAT
258 AAACTCATACAAATCCCTATTCTTTTCAGAATTAGGCACCATAAACATAGTCTTCACATTAGGAT
* * * *
41555 ACACGATACTGATGCTTTGGTTTCTAAAGAAA-GTTATTTTTCGCACCAATTTTCGTAAAGCCGA
323 ACACGATACTGATGCTTTGGTTTCGAAAGAAATG-CATTTTTCGAACCAATTCT-GTAAAGCCGA
* *
41619 AGTTTTTGCCTCAAATAAAACAAACTTGGATTCTTGTAATGATCTTCACTCATTTTGTGATTAGG
386 AGTTTGTGCCTCAAATAAAACAAACATGGATTCTTGTAATGATCTTCACTCATTTTGTGATTAGG
* * * *
41684 CT-CTATAAACACATTCTCCTC-TTACGGATTAATGATATTGATGATTTTCTTTTCCA-CGAATA
451 -TACCATAAACACATTCTCCTCAATA-GGATAAATGATATTGACGATTTTCTTTTCCATCGAA-A
** * * * *
41746 TCTTTTCTTCGCTCTATTTTCCTTAAAATTGA-AGTTCATCCCTTATATAAGACAAGCATCAATT
513 AATTTTCTTCGC-CT-TTTTCCCTAAAAATCATAGTTCATCCCTTAAATAAGACAAGCATCAATT
* *
41810 CTCATAATAGCCTCTATTCTTTTCGAGATTCAGAACCAAAAACACCTTCACTTAATTAGGAGACA
576 CTCATAATAGCCTCTATTCTTTTCAAGATTCAGAACCAAAAACACATTCACTTAATTAGGAGACA
* * * * *
41875 AGACATTGATGTTTTGGTGTTGCAAGAAAAGCTTTTCTTTTCACCGTTTTTGATAGAATTAAGGT
641 AGACATTGATGTTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGT
* * * * * *
41940 TTGTCTTTTAAGTAAGACAAACATGAATACGCATACTAAACCCTATTCTTTTTATGATTAGGCAC
706 TTATCTCTTAAATAAGACAAACATGAATACGCATACTAAACCCCATTCTTCTTAAGATTAGGCAC
42005 CAT
771 CAT
42008 GAACATAGTC
Statistics
Matches: 657, Mismatches: 104, Indels: 22
0.84 0.13 0.03
Matches are distributed among these distances:
791 1 0.00
792 90 0.14
793 130 0.20
794 257 0.39
795 173 0.26
796 3 0.00
797 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.13, T:0.38
Consensus pattern (796 bp):
GATAAATCATACTGATGATTTTCTTTTCAATGAAAATCCTTTCTTTACCCTATTTTCCTTAAAAT
CAAAGATCATCCCTTAAATAAGACAAATATCGATTCTCGTAACAGTCTCCATTCTCTTAAAGATT
GAGAAGCTAAAACGCATTCCTTTCATTAGGATACATGACATTGATGCTTTTGGTGCCATAAGAAA
AGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCCTAAATAAGACAAACACAAAAA
CTCATACAAATCCCTATTCTTTTCAGAATTAGGCACCATAAACATAGTCTTCACATTAGGATACA
CGATACTGATGCTTTGGTTTCGAAAGAAATGCATTTTTCGAACCAATTCTGTAAAGCCGAAGTTT
GTGCCTCAAATAAAACAAACATGGATTCTTGTAATGATCTTCACTCATTTTGTGATTAGGTACCA
TAAACACATTCTCCTCAATAGGATAAATGATATTGACGATTTTCTTTTCCATCGAAAAATTTTCT
TCGCCTTTTTCCCTAAAAATCATAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAATAG
CCTCTATTCTTTTCAAGATTCAGAACCAAAAACACATTCACTTAATTAGGAGACAAGACATTGAT
GTTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCTTA
AATAAGACAAACATGAATACGCATACTAAACCCCATTCTTCTTAAGATTAGGCACCATAAAAAAA
GTCTTCTCTTTATTGT
Found at i:42853 original size:476 final size:474
Alignment explanation
Indices: 41236--43677 Score: 2495
Period size: 473 Copynumber: 5.1 Consensus size: 474
41226 TCTTTATTGT
* * * * * *
41236 GATAAATCATACTGATGATTTTCTTTTCCTTGAAAATCTTTTCTTTACCTTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* ** ** * * *
41301 CAAAGATCATTTCTTAAATAAGATGA-CAATTGATTCTTGTAACAGTCTCCATTCTCTTAAAGAT
66 CAAAGTTCATCCCTTAAATAAGACAAGC-ATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGAT
* ** *
41365 T-GAGAAGCTAAAACAGATTCCTTTCATTAGGATACATGACATTGATGCTTTGGTGTCATAAGAG
130 TCGA-AAGCTAAAACACATTCC-TTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAA
* * * * * * *
41429 AAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTATCTCCTAAATAAGACAAACACAAAA
193 AAGCCTTTCTTTTCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATAAAT
* * * * * * * *
41494 ACTTA-AC-AAATCTCGTT-CTTTTCAGAATTAGGTAGCATAAACATAGTCTTCACATTATGATA
258 ACTCATACTAAACCCCATTCCTTTT-AGGATTAGGCACCATAAACATAGTCTTCACATTAGGATA
* * * *
41556 CACGATACTGATGCTTTGGTTTCTA-AAGAAA-GTTATTTTTCGCACCAATTTTCGTAAAGCCGA
322 CACGATATTGATGCTTTGGTTTC-ACAAAAAACG-CATTTTTCGCACCAATTTT-GTAAAGCCTA
* *
41619 AGTTT-TTGCCTCAAATAAAACAAACTTGGATTCTTGTAATGATCTTCACTCATTTTGTGATTAG
384 AGTTTGTT-CCTCAAATAAGACAAACTTGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAG
* *
41683 GCTCTATAAACACATTCTCCTC-TTACG
448 GCACTATAAACACATTCTCCTCACTA-G
* * * *
41710 GATTAATGATATTGATGATTTTCTTTTCCA-CGAATATCTTTTCTTCGCTCTATTTTCCTTAAAA
1 GATAAATGATATTGATGATTTTCTTTTCCATGGAA-ATCTTTTCTTTGCCCTATTTTCCTTAAAA
** * * * * * * **
41774 TTGAAGTTCATCCCTTATATAAGACAAGCATCAATTCTCATAATAGCCTCTATTCTTTTCGAGAT
65 TCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGAT
* * * * * * * *
41839 TC-AGAACCAAAAACACCTTCACTTAATTAGGAGACAAGACATTGATGTTTTGGTGTTGCAAGAA
130 TCGA-AAGCTAAAACACATTC-CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAA
* * * * * * *
41903 AAGCTTTTCTTTTCACCGTTTTTGATAGAATTAAGGTTTGTCTTTTAAGTAAGACAAACATGAAT
193 AAGCCTTTCTTTTCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATAAAT
* * * * *
41968 ACGCATACTAAACCCTATTCTTTTTATGATTAGGCACCATGAACATAGTCTTCACATTAGGATAC
258 ACTCATACTAAACCCCATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTCACATTAGGATAC
* * * *
42033 ACGATATTGATGCTTTGGTTTCACAAGAAAGGCCTTTTTCGCACCAAATTTTGTAAAGTCTAAGT
323 ACGATATTGATGCTTTGGTTTCACAAAAAACGCATTTTTCGCACC-AATTTTGTAAAGCCTAAGT
* * * * * *
42098 TCGTGTCC-C-AATGAGAAAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGGCA
387 TTGT-TCCTCAAATAAGACAAACTTGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAGGCA
*
42161 CTATAAACACATTCTCCTCATTAG
451 CTATAAACACATTCTCCTCACTAG
* * *
42185 GATAAATTATATTGATGA-TTT-TTTTCCAAGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * * * **
42248 CAAAGTTTATCCTTTAAATAAGACGATG-ATCGATTCTTGTAATAGTCTCCATAGTTTTAAAGAT
66 CAAAGTTCATCCCTTAAATAAGAC-AAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGAT
* * ** * * *
42312 TAGGAAGCTAAAAGGCATTCCTTCTATTACGATACAAGACATTGATGCTTTGGTGTCGTAAGAAA
130 TCGAAAGCTAAAACACATTCCTTC-ATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
* * * ** **
42377 AGCCTTTCTTTTCACCATTTTTTATAGAATCACATTTTATCTCTTAAAAAAGACAAACGCAAATA
194 AGCCTTTCTTTTCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATAAATA
* * * *
42442 CTAAAACTAACCCCCATTCCTTTTAGGATTAGGCAACATAAACATAGTCTTCACATTAGGATACA
259 CTCATACTAAACCCCATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTCACATTAGGATACA
* * ** * * *
42507 CGATATTGAAGCTTTGATTTCGGAAAAAACACATTTTTCTCACCAATTTTCGTAAAGCCTATGTT
324 CGATATTGATGCTTTGGTTTCACAAAAAACGCATTTTTCGCACCAATTTT-GTAAAGCCTAAGTT
* * *
42572 TGTTCCTCAAATGAGACAAACTTGGATTCTTGTAATGGTCTTCATTCATTTTGTGATTAGGCACC
388 TGTTCCTCAAATAAGACAAACTTGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAGGCACT
*
42637 ATAAACACAATT-TCCTTACTAG
453 ATAAACAC-ATTCTCCTCACTAG
42659 GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * * * **
42724 CAAAGTTCATCCCTTAAGT-AGCTCAAGCATCGATTCTCGTAACAATGTCCATTTTTTTCGAGAT
66 CAAAGTTCATCCCTTAAATAAG-ACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGAT
* * * * *
42788 TCGAAACCAAAAACACCTTCACTTCATTAGAAGACATGACATTGATGCTTTGGTGTCGCAAGAAA
130 TCGAAAGCTAAAACACATTC-CTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAA
* * * * * *
42853 AGCCTTTCTTTCCACTATTTTTGATAAAATCAAAGTTTGTCTTTTAAGTGAGACAAACATAAATA
194 AGCCTTTCTTTTCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATAAATA
* ** *
42918 CTTATA-TCAGTCCCCATTCCTTTCAGGATTAGGCACCATAAACATAGTCTTCACATTAGGATAC
259 CTCATACT-AAACCCCATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTCACATTAGGATAC
** * * * * * * * *
42982 TTGATATTGACGCTTTAGTTTCGCAAGAAAGGCCTTTTTTCACACCAATTTTTGTAAAGTCTAAG
323 ACGATATTGATGCTTTGGTTTCACAAAAAACG-CATTTTTCGCACCAA-TTTTGTAAAGCCTAAG
* * * * *
43047 TTTGTACCCCAAATAAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGGCA
386 TTTGTTCCTCAAATAAGACAAACTTGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAGGCA
* *
43112 CTATAAACACATTCTTCTCAATAG
451 CTATAAACACATTCTCCTCACTAG
* * * * *
43136 GATAATTTATATTGATGATTTTCTTTTCGATGGAAATCTTTTCTTTGCCATATTTTTCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
* * * *
43201 CAATGTTCATCCCATAAATAAGACAAGCATTGATTCTCGTAACAGTCTCCATTC-ATTAAAGATT
66 CAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATT
* ** ** * * *
43265 GGGTAGCTAAAATGCATTCCCTTCTTTAGGATACATGATATTGATGCTTTGGTGTCGCCAGAAAA
131 CGAAAGCTAAAACACATT-CCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA
* * ** * * *
43330 G-CTTT-TTTTCCACCGTTTTTTATAAAATCATGGTTTGTCTATTAAGTGAGACAAACATGAATA
195 GCCTTTCTTTT-CACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATAAATA
* * * * * * *
43393 CTCATACTAATCACAATT-CTTTTCAAGAGTAGGCACCATAAACATAATCTTTACATTAGGATAC
259 CTCATACTAAACCCCATTCCTTTT-AGGATTAGGCACCATAAACATAGTCTTCACATTAGGATAC
* * * * * **
43457 ACAATATTGATGCTTTGGTTTTACAAGAAAA-GTATTTTTCCCACTAATTTTGTAAAGCCGCAGT
323 ACGATATTGATGCTTTGGTTTCACAA-AAAACGCATTTTTCGCACCAATTTTGTAAAGCCTAAGT
* * * * * * * * *
43521 TCGTGCCTTAAATTAGATAAA-TATTGATTTTTGTAATGATCTTCATTCATTTTGAGACTAGGCA
387 TTGTTCCTCAAATAAGACAAACT-TGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAGGCA
* * *
43585 CCATAAACACGTTCTCCTCATTAG
451 CTATAAACACATTCTCCTCACTAG
* * * *
43609 GATAAGTGATATTGATGATTTACTTTTCAATGGAAATCTTTTCCTTGCCCTATTTTCCTTAAAAT
1 GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
43674 CAAA
66 CAAA
43678 TGAAAGCTTA
Statistics
Matches: 1618, Mismatches: 313, Indels: 75
0.81 0.16 0.04
Matches are distributed among these distances:
472 12 0.01
473 432 0.27
474 309 0.19
475 216 0.13
476 423 0.26
477 219 0.14
478 7 0.00
ACGTcount: A:0.32, C:0.18, G:0.13, T:0.37
Consensus pattern (474 bp):
GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAAT
CAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGATT
CGAAAGCTAAAACACATTCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
CCTTTCTTTTCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAGTAAGACAAACATAAATACT
CATACTAAACCCCATTCCTTTTAGGATTAGGCACCATAAACATAGTCTTCACATTAGGATACACG
ATATTGATGCTTTGGTTTCACAAAAAACGCATTTTTCGCACCAATTTTGTAAAGCCTAAGTTTGT
TCCTCAAATAAGACAAACTTGGATTCTTGTAATGATCTTCATTCATTTTGTGATTAGGCACTATA
AACACATTCTCCTCACTAG
Found at i:44458 original size:13 final size:13
Alignment explanation
Indices: 44440--44465 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
44430 CAATTTTTTG
44440 TGTATCGATACAT
1 TGTATCGATACAT
44453 TGTATCGATACAT
1 TGTATCGATACAT
44466 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:44477 original size:32 final size:33
Alignment explanation
Indices: 44420--44483 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
44410 TACAAGCCAA
**
44420 TGTATCGATACAATTTTTTGTGTATCGATACAT
1 TGTATCGATACAATACTTTGTGTATCGATACAT
44453 TGTATCGATAC-ATACTTTGTGTATCGATACA
1 TGTATCGATACAATACTTTGTGTATCGATACA
44484 AGTTTGGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 18 0.62
33 11 0.38
ACGTcount: A:0.28, C:0.14, G:0.16, T:0.42
Consensus pattern (33 bp):
TGTATCGATACAATACTTTGTGTATCGATACAT
Found at i:44599 original size:71 final size:72
Alignment explanation
Indices: 44347--44599 Score: 186
Period size: 71 Copynumber: 3.5 Consensus size: 72
44337 TTCCCGTGTG
*
44347 AATGTATCAATACAA-TTTTTGATGTATCAATACATATTTGAAAATATAGCCGTTTCTAGCCGTT
1 AATGTATCAATACAATTTTTTGATGTATCGATACATATTTGAAAATATAGCCGTTTCTAGCCGTT
44411 ACAAGCC
66 ACAAGCC
* * * * * *
44418 AATGTATCGATACAATTTTTTG-TGTATCGATACAT-TGTATCG-ATACATA--CTTTGTGTA-T
1 AATGTATCAATACAATTTTTTGATGTATCGATACATAT-T-T-GAAAATATAGCCGTT-TCTAGC
*
44477 CGATACAAG--
62 CGTTACAAGCC
** * ****
44486 TTTGGCTACTACCAAGA-AATCCCAATGACATGTATCGATACATATTTGAAAATATAGCCGTTTC
1 AAT-G-TA-T--CAATACAAT-TTTTTG--ATGTATCGATACATATTTGAAAATATAGCCGTTTC
44550 TAGCCGTTACAAGCC
58 TAGCCGTTACAAGCC
44565 AATGTATCAATACAATTTTTTG-TGTATCGATACAT
1 AATGTATCAATACAATTTTTTGATGTATCGATACAT
44600 TGTATCGATA
Statistics
Matches: 131, Mismatches: 29, Indels: 44
0.64 0.14 0.22
Matches are distributed among these distances:
68 1 0.01
69 1 0.01
70 14 0.11
71 44 0.34
72 15 0.11
73 6 0.05
74 7 0.05
75 9 0.07
76 18 0.14
77 14 0.11
78 1 0.01
79 1 0.01
ACGTcount: A:0.33, C:0.17, G:0.14, T:0.36
Consensus pattern (72 bp):
AATGTATCAATACAATTTTTTGATGTATCGATACATATTTGAAAATATAGCCGTTTCTAGCCGTT
ACAAGCC
Found at i:44605 original size:13 final size:13
Alignment explanation
Indices: 44587--44612 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
44577 CAATTTTTTG
44587 TGTATCGATACAT
1 TGTATCGATACAT
44600 TGTATCGATACAT
1 TGTATCGATACAT
44613 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:44611 original size:33 final size:32
Alignment explanation
Indices: 44567--44628 Score: 88
Period size: 32 Copynumber: 1.9 Consensus size: 32
44557 TACAAGCCAA
**
44567 TGTATCAATACAATTTTTTGTGTATCGATACAT
1 TGTATCAATAC-ATACTTTGTGTATCGATACAT
*
44600 TGTATCGATACATACTTTGTGTATCGATA
1 TGTATCAATACATACTTTGTGTATCGATA
44629 TAAGTTTGGC
Statistics
Matches: 26, Mismatches: 3, Indels: 1
0.87 0.10 0.03
Matches are distributed among these distances:
32 16 0.62
33 10 0.38
ACGTcount: A:0.29, C:0.13, G:0.15, T:0.44
Consensus pattern (32 bp):
TGTATCAATACATACTTTGTGTATCGATACAT
Found at i:44635 original size:147 final size:147
Alignment explanation
Indices: 44368--44674 Score: 578
Period size: 147 Copynumber: 2.1 Consensus size: 147
44358 ACAATTTTTG
* *
44368 ATGTATCAATACATATTTGAAAATATAGCCGTTTCTAGCCGTTACAAGCCAATGTATCGATACAA
1 ATGTATCGATACATATTTGAAAATATAGCCGTTTCTAGCCGTTACAAGCCAATGTATCAATACAA
44433 TTTTTTGTGTATCGATACATTGTATCGATACATACTTTGTGTATCGATACAAGTTTGGCTACTAC
66 TTTTTTGTGTATCGATACATTGTATCGATACATACTTTGTGTATCGATACAAGTTTGGCTACTAC
44498 CAAGAAATCCCAATGAC
131 CAAGAAATCCCAATGAC
44515 ATGTATCGATACATATTTGAAAATATAGCCGTTTCTAGCCGTTACAAGCCAATGTATCAATACAA
1 ATGTATCGATACATATTTGAAAATATAGCCGTTTCTAGCCGTTACAAGCCAATGTATCAATACAA
* *
44580 TTTTTTGTGTATCGATACATTGTATCGATACATACTTTGTGTATCGATATAAGTTTGGCTACTGC
66 TTTTTTGTGTATCGATACATTGTATCGATACATACTTTGTGTATCGATACAAGTTTGGCTACTAC
44645 CAAGAAATCCCAATGAC
131 CAAGAAATCCCAATGAC
44662 ATGTATCGATACA
1 ATGTATCGATACA
44675 ACTTTTTCAT
Statistics
Matches: 156, Mismatches: 4, Indels: 0
0.98 0.03 0.00
Matches are distributed among these distances:
147 156 1.00
ACGTcount: A:0.33, C:0.18, G:0.15, T:0.34
Consensus pattern (147 bp):
ATGTATCGATACATATTTGAAAATATAGCCGTTTCTAGCCGTTACAAGCCAATGTATCAATACAA
TTTTTTGTGTATCGATACATTGTATCGATACATACTTTGTGTATCGATACAAGTTTGGCTACTAC
CAAGAAATCCCAATGAC
Found at i:45302 original size:40 final size:41
Alignment explanation
Indices: 45256--45346 Score: 107
Period size: 39 Copynumber: 2.3 Consensus size: 41
45246 TTTTCTTTTT
*
45256 CCCTTAACTAAAG-TAATTTTAACAAATTCGTACATTCTCC
1 CCCTTAACTAAAGATAATTTTAACAAATTCATACATTCTCC
* * *
45296 CCCTTAA-T-AAGATAATTTTAGCAAATTTATGCATTCTCC
1 CCCTTAACTAAAGATAATTTTAACAAATTCATACATTCTCC
* *
45335 CCTTTTACTAAA
1 CCCTTAACTAAA
45347 AAAAATCTCC
Statistics
Matches: 42, Mismatches: 6, Indels: 5
0.79 0.11 0.09
Matches are distributed among these distances:
38 3 0.07
39 29 0.69
40 8 0.19
41 2 0.05
ACGTcount: A:0.34, C:0.23, G:0.05, T:0.37
Consensus pattern (41 bp):
CCCTTAACTAAAGATAATTTTAACAAATTCATACATTCTCC
Found at i:46827 original size:13 final size:13
Alignment explanation
Indices: 46809--46846 Score: 67
Period size: 13 Copynumber: 2.9 Consensus size: 13
46799 ATAATCCCCC
46809 TGTATCGATACAG
1 TGTATCGATACAG
*
46822 TGTATCGATACAT
1 TGTATCGATACAG
46835 TGTATCGATACA
1 TGTATCGATACA
46847 AAGAAAAATA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
13 24 1.00
ACGTcount: A:0.32, C:0.16, G:0.18, T:0.34
Consensus pattern (13 bp):
TGTATCGATACAG
Found at i:48957 original size:15 final size:15
Alignment explanation
Indices: 48921--48958 Score: 58
Period size: 15 Copynumber: 2.5 Consensus size: 15
48911 TTCATCGATT
* *
48921 TCATTTGGAGCTTCT
1 TCATTTTGAGCTTCC
48936 TCATTTTGAGCTTCC
1 TCATTTTGAGCTTCC
48951 TCATTTTG
1 TCATTTTG
48959 GACATTTTTA
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
15 21 1.00
ACGTcount: A:0.13, C:0.21, G:0.16, T:0.50
Consensus pattern (15 bp):
TCATTTTGAGCTTCC
Found at i:50790 original size:21 final size:21
Alignment explanation
Indices: 50761--50805 Score: 56
Period size: 21 Copynumber: 2.1 Consensus size: 21
50751 AAGTTTTTAT
*
50761 TTTTCTTAGCTAAC-TCATTA
1 TTTTCTTAGCCAACTTCATTA
*
50781 TTTTCATTAGCCAACTTCTTTA
1 TTTTC-TTAGCCAACTTCATTA
50803 TTT
1 TTT
50806 CAACTTGCAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
20 5 0.24
21 8 0.38
22 8 0.38
ACGTcount: A:0.22, C:0.20, G:0.04, T:0.53
Consensus pattern (21 bp):
TTTTCTTAGCCAACTTCATTA
Found at i:53044 original size:13 final size:13
Alignment explanation
Indices: 53026--53051 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
53016 CAATTTTTTG
53026 TGTATCGATACAT
1 TGTATCGATACAT
53039 TGTATCGATACAT
1 TGTATCGATACAT
53052 ACTTTGTGTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.31, C:0.15, G:0.15, T:0.38
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:53063 original size:32 final size:33
Alignment explanation
Indices: 53006--53069 Score: 103
Period size: 32 Copynumber: 2.0 Consensus size: 33
52996 TACAAGCTAA
**
53006 TGTATCGATACAATTTTTTGTGTATCGATACAT
1 TGTATCGATACAATACTTTGTGTATCGATACAT
53039 TGTATCGATAC-ATACTTTGTGTATCGATACA
1 TGTATCGATACAATACTTTGTGTATCGATACA
53070 AGTTTGGCTA
Statistics
Matches: 29, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
32 18 0.62
33 11 0.38
ACGTcount: A:0.28, C:0.14, G:0.16, T:0.42
Consensus pattern (33 bp):
TGTATCGATACAATACTTTGTGTATCGATACAT
Found at i:54336 original size:476 final size:477
Alignment explanation
Indices: 53444--57735 Score: 4743
Period size: 476 Copynumber: 9.1 Consensus size: 477
53434 AAATCCTAAC
* * * *
53444 ATCAAAGTTCATCCTTTAAATAAGACAAGCATCGATTCTCATAATAGTCTCCATTCTTTTAAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
* * * * *
53509 TTAGGAAGCTAAAACGCATTCCCTTCTTTAGGATACAAGATATTGATGCTTTAGG-GTCTTAAGA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT-GGTGTCGTAAGA
* * * *
53573 AAAGCGTTTCTTTCTACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAATATGAA
130 AAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * * * *
53638 TACTCATACCAATCCCTATTCTTTTTAGGATTAGGCACCAT-AACAAAAGTCTTCACAATAGGAT
195 TACTCATACTAATCCCCATTCCTTTTAGGATTAGGCAGCATAAAC-ATAGTCTTCACATTAGGAT
* * * *
53702 ACATGATATTGATGCTTTGGTTTCGCAAGAAAGG-TTTTTTTCACACCAATTTTTGTAAAGTTTA
259 ACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTA
* * * * * *
53766 AGTTCGTGCCCCAAATGAGTCAAATATGAATTCCAGTAATAATCTTCACTT-ATTTTGTAATTAG
324 AGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCA-TTCATTTTGTAATTAG
* *
53830 GAACTATAAACACATTCTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTCCAAGGAAAT-
388 GCACTATAAACACATTCTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAATC
53894 TTTCTCTTTGCCCTATTTTCCTTAAA
453 TTT-TCTTTGCCCTATTTTCCTTAAA
* * * * *
53920 ATCAAAGTTTATCCCTTAATTAAGACGAGGATCAATTCTTC-TAACAGTCTCCATTCTTTTGAAG
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTC-TCGTAACAGTCTCCATTCTTTTAAAG
* * * ** *
53984 ATTGGGGAGCTGAAACGCATTTCAATCATTAGGATACATGACCTTGATGCTTTGGTGTCGTAAGA
65 ATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGA
* * * **
54049 AAAGCTTTTCTTTCCACAATTTTTTATAGAATCAAAGTTTTTTTCTTAAATAAGACAAACACAAA
130 AAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * *
54114 TACTCAAACTAACCCCCATTCCTTTTAAGATTAGGCAGCATAAACATAGTCTTCAGATTAGGATA
195 TACTCATACTAATCCCCATTCCTTTTAGGATTAGGCAGCATAAACATAGTCTTCACATTAGGATA
* *
54179 CACGATATTGATGCTTTGGTTTCGCAAGAAA-GCTATTTTTCCCACCAATTTTGGTAAAGCCTAA
260 CACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTAA
* * * * *
54243 GTTTGTGCCTCAAATGAGGCAAACATGGATTCTTGTAATGATCTTCACTCATTTTGTGATTAGGC
325 GTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGGC
* * ** * * ***
54308 TCTATAAACACATTCTCCTCTTTAGGATAAAAGATATTGATGGTTTTCTTTTACACAAAAATCTT
390 ACTATAAACACATTCTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAATCTT
* *
54373 TTCTATGCCTTATTTTCCTTAAA
455 TTCTTTGCCCTATTTTCCTTAAA
* * * * * * *
54396 ATCAAAGTTCATCCCTTAAATAACATAAGCATCGATTCTCATAATAGTCTCTATACTTTTAAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
* * * * * *
54461 TTGGGAAGCTAAAACGCATTCCCTTCTTTAGGATACCTGACATTGATACTTTGGAGTCATAAAAA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
* * * **
54526 AAGCTTTTCTTTCTC-CCATTTTTGATAGAATTAAAGTTTGTCTCTTAAATCAGGTAAACATGAA
131 AAGCTTTTCTTTC-CACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * * * *
54590 TACTCATACTAAT---C-TT--TTTCAAGATTAGGC-GCCATAAACATAGTCTTCTCCTAAGGGT
195 TACTCATACTAATCCCCATTCCTTTTAGGATTAGGCAG-CATAAACATAGTCTTCACATTAGGAT
* * *
54648 ACTA-GATATTGACGCTTTGGTTTCACAAGAAAGGCT-TTTTTCACACCAATTTTTGTAAAGTCT
259 AC-ACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCT
* *
54711 AAGTTCGTGTCCT-AAATGAGATAAACATGGATTCTAGTAATGATCTTCACTCATTTTGTAATTA
323 AAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTA
* * *
54775 GGCACTATAAACACATTCT-CTCTATTGGGATAAATTATGTTGATAATTTTCTTTTCCATGGAAA
387 GGCACTATAAACACATTCTCCTC-ATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAA
54839 TCTTTTCTTTGCCCTATTTTCCTTAAA
451 TCTTTTCTTTGCCCTATTTTCCTTAAA
* ** * * *
54866 ATCAAAGTTCATCCCTAAAATAAGATGAGGATCGATTCTTGTAACAATCTCCATTCTTTTGAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
* * * * *
54931 TTGGGAAGCTAAAACGCATTCCCTTCATTAAGAAACATGACATTAATGGTTTGGGGTCGTAAGAA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
* * * * * *
54996 AAGCTTTTCTTTCCACCGTTTTTGATCGAATCAAGGTTTGTCTCTTAAGTAAGATAAACATGAAT
131 AAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* * * * * *
55061 ACTCATACTAATCCCCACT-CTTTTCAGGATTAGGTAGTATGAACTTAGTTTTCACATTAGGATA
196 ACTCATACTAATCCCCATTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCACATTAGGATA
* * * * * *
55125 CATGATATTAATGCTTTGGTTTTGCAAGAAAGGC-ATTTTTCCCATCAATTTTTTTAAAGACTAA
260 CACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTAA
* * * *
55189 GTTCGTGCCT----T---ACTTAA-A--GATTCTTGTAATGATCTTGATTCATTTTGTGATTAGG
325 GTTCGTGCCTCAAATGAGAC-AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGG
* * * * * *
55244 CACCATAAACACATTCTCTTCATTATGA-AAATTGATATTGATGATTTTTTTTTGCATGGAATTC
389 CACTATAAACACATTCTCCTCATTAGGATAAATT-ATATTGATGATTTTCTTTTCCATGGAAATC
55308 TTTTCTTTGCCCTATTTTCCTTAAA
453 TTTTCTTTGCCCTATTTTCCTTAAA
* * * *
55333 ATCAAAGTTCATCTCTTAAATAAGACAAGAATCGATTCTCGTAATAGTCTCTATTCTTTTAAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
* * * * * * * **
55398 TTGGGAAGCTAAAATGTATTCCCTTCTTTAGGATACATAATACTGATGCTGTGGTGTCGCCAGAA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
* * * * *
55463 AAGCTTTTCTTTCCA--ATGTTTTTCATAAAATCAAAGTTTATCTCATAAACAAGACAAACTTGA
131 AAGCTTTTCTTTCCACCAT-TTTTT-ATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGA
* *** * * *
55526 ATACTCATACTAA-CACCCATTCTTTTTAGGATTAGGCCTTATAAACATAGTCTTCTCCTTAAGA
194 ATACTCATACTAATC-CCCATTCCTTTTAGGATTAGGCAGCATAAACATAGTCTTCACATTAGGA
* ** * * * * *
55590 TAAATAATATTGATGCTTTGGTTTCGTAAGAAAGACT-TTTATCACACCAATTTTTGTAATGTCT
258 TACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCT
* * * *
55654 AAGTTCGTGTCTTAAATAAGACAAACATGGATTCTAGTAATGATTTTCATTCATTTTGTAATTAG
323 AAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAG
* ** * *
55719 GCA-TGATAAACACATTCTCAC-CAATAGGATAAACGATATTGATGATTTTC-GTTCGCTTGGAA
388 GCACT-ATAAACACATTCTC-CTCATTAGGATAAATTATATTGATGATTTTCTTTTC-CATGGAA
* * *
55781 ATCTTTTCTTTGCCCAATTTTTCATAAA
450 ATCTTTTCTTTGCCCTATTTTCCTTAAA
* * * * * * *
55809 GTCATAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAATATCC-TTTTTTTTAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
** * * * * * * * *
55873 TAAGGAACCAAAAACACATTACCTTCATTAGGATACATGACTTTGATGCCTTGGTGTGGCAAGAA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
** * * * *
55938 AA-CTTATTCTTTCCACCATTTTAGATAGAATCAAAGTTTCTCTCTTAAATAACAAAAACTTGAA
131 AAGCTT-TTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
* * * * * * * * *
56002 TAGTCATACT-AGCTCCATTCCTTTCT-GGATTAGGCATCGTAAACATAGTATTCTCATAAAGAT
195 TACTCATACTAATCCCCATTCCTTT-TAGGATTAGGCAGCATAAACATAGTCTTCACATTAGGAT
* * * * * *
56065 ACACGATATTGAAGCTTTGATTTTGCTAGAAAGGC-ATTTTTCCCTCCAATTTTTGTAAAGCCTA
259 ACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTA
* * * *
56129 AGTTCGTGCCTCAAATGAGACAAACATGGATTTTTGTAATGATATTCATTCATTTTGTGATTAGG
324 AGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGG
* * * *
56194 CACTATAAACATATTCTCCTCATTAGGATAAATGATATTGATGGTTTTCTTTTGCATGGAAATCT
389 CACTATAAACACATTCTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAATCT
*
56259 TTTCTATGCCCTATTTTCCTTAAA
454 TTTCTTTGCCCTATTTTCCTTAAA
*
56283 ATCAAAGTTTATCCCTTAAAT-A-AC----A--G-----C----C--T-T-CATTCTTTTAAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
* *
56327 TTGGGAAGCTAAAATGCATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
*
56392 AAGCTTTTCTTTCCACC-TTTTTTGATAGAATCAAAGTTTGTCTCTTAAATCAA-ACAAACATAA
131 AAGCTTTTCTTTCCACCATTTTTT-ATAGAATCAAAGTTTGTCTCTTAAAT-AAGACAAACATGA
* * * *
56455 ATACTCATACTAATCCCCATT-CTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCCTAAGGA
194 ATACTCATACTAATCCCCATTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCACATTAGGA
* *
56519 TACAGGATATTGACGCTTTGGTTTCGCAAGAAAGGC-A-TTTTCCACACCAATTTTTGTAAAGTC
258 TACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCC-CACCAATTTTTGTAAAGTC
* * *
56582 TAAGTTCTTATCC-CAAATGAGATAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATT
322 TAAGTTCGT-GCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATT
* *
56646 AGGCACTATAAACACAATT-TCCT-TTTCAGGATAAATGATATTGATGATTTTCTTTTCCATGGA
386 AGGCACTATAAACAC-ATTCTCCTCATT-AGGATAAATTATATTGATGATTTTCTTTTCCATGGA
* * *
56709 AAACTTTTCTTTGCCTTATTTTCTTTAAA
449 AATCTTTTCTTTGCCCTATTTTCCTTAAA
* * * * **
56738 ATTAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCGTAACTGTCTCCATTCTTTTCGAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
** * * * * * ** * *
56803 TTAAGAACCGAAAACACCTTCACTTC-TGTAGGAGGCATGACATTGATGCTTTGGTGTAGAAAGA
66 TTGGGAAGCTAAAACGCATTCCCTTCAT-TAGGATACATGACATTGATGCTTTGGTGTCGTAAGA
* * * * * *
56867 AAAGCTTTTCTTTCTACCGTTTTTTATAAAATCAAGGTTTGTCT-TCTAAGTAAGACAAACATAA
130 AAAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCT-TAAATAAGACAAACATGA
* * * *
56931 ATACTCATACTAATCCCCATTCCTTTCAAGATTAGGTACCATAAACATAGTCTTCACATTAGGAT
194 ATACTCATACTAATCCCCATTCCTTTTAGGATTAGGCAGCATAAACATAGTCTTCACATTAGGAT
* *
56996 ACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCT-TTTTTCGCACTAATTTTTGTAAAGTCTA
259 ACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTA
* *
57060 TGTTCGTGTCC-CAAATGAGACAAGCATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAG
324 AGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAG
* *
57124 GCACTATAAACACATTTTCCTTATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAATC
388 GCACTATAAACACATTCTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAATC
* * * *
57189 CTTTCTTTGTCCTGTTTTTCTTAAA
453 TTTTCTTTGCCCTATTTTCCTTAAA
* * * * * *
57214 ATCAAAGTTAATCCCTTAAATAAGACAAGGATCGATTCTTGCAGCAGTCTCCATTCTTTTGATGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
** *
57279 TTAAGAAGCTAAAACGCATTCCCTTCATTAGGAAACATGACATTGATGCTTTGGTGTCGTAAGAA
66 TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
*** * * * **
57344 AAGCTTTTCTTTTTGCCATTTTTTATAGAGTCAAAGTTTATCTCTTAAATAAAACAAACACAAAT
131 AAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* * * * *
57409 ACTCAAACTAACCCCCATT-CTTTTCGGGATTAGGCAGCATAAATATAGTCTTTACATTAGGATA
196 ACTCATACTAATCCCCATTCCTTTT-AGGATTAGGCAGCATAAACATAGTCTTCACATTAGGATA
* * * * * * *
57473 CACGATATTGATGCTTTAGTTTCACAAGAAAGAC-ATTTTTCTCACTAATTTTTGTAAAGCCTGA
260 CACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTAA
* * * * * * * *
57537 GTTTGTGCCTTAAATGCGACAAACATGGATTCTTGTAATGATTTTTATTCATTTTGTGATTAGCC
325 GTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGGC
* * *
57602 ACTATAAACACATTCTCCTCATTAGGA-AAATTGATATTAATGATTTTCTTTTGCATGAAAATCT
390 ACTATAAACACATTCTCCTCATTAGGATAAATT-ATATTGATGATTTTCTTTTCCATGGAAATCT
57666 TTTCTTTGCCCTAGTTTT-CTTAAA
454 TTTCTTTGCCCTA-TTTTCCTTAAA
*
57690 ATCAAAGTTCATCCCTTAAA-AAGGACAAGGATCGATTCTTGTAACA
1 ATCAAAGTTCATCCCTTAAATAA-GACAAGGATCGATTCTCGTAACA
57736 TGTTAGGATC
Statistics
Matches: 3200, Mismatches: 512, Indels: 208
0.82 0.13 0.05
Matches are distributed among these distances:
453 6 0.00
454 131 0.04
455 243 0.08
456 6 0.00
457 2 0.00
461 2 0.00
463 1 0.00
465 1 0.00
466 11 0.00
467 363 0.11
468 8 0.00
469 7 0.00
470 393 0.12
471 8 0.00
472 6 0.00
473 6 0.00
474 245 0.08
475 153 0.05
476 1570 0.49
477 38 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (477 bp):
ATCAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTCGTAACAGTCTCCATTCTTTTAAAGA
TTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGTAAGAA
AAGCTTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
ACTCATACTAATCCCCATTCCTTTTAGGATTAGGCAGCATAAACATAGTCTTCACATTAGGATAC
ACGATATTGATGCTTTGGTTTCGCAAGAAAGGCTATTTTTCCCACCAATTTTTGTAAAGTCTAAG
TTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTAGGCA
CTATAAACACATTCTCCTCATTAGGATAAATTATATTGATGATTTTCTTTTCCATGGAAATCTTT
TCTTTGCCCTATTTTCCTTAAA
Found at i:58155 original size:21 final size:20
Alignment explanation
Indices: 58109--58161 Score: 72
Period size: 19 Copynumber: 2.6 Consensus size: 20
58099 GTAGCCAAAC
**
58109 TTGTATCGATACACAAAGTA
1 TTGTATCGATACACAAAAAA
58129 -TGTATCGATACACAAAAAAA
1 TTGTATCGATACAC-AAAAAA
58149 TTGTATCGATACA
1 TTGTATCGATACA
58162 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 3
0.85 0.06 0.09
Matches are distributed among these distances:
19 13 0.45
20 4 0.14
21 12 0.41
ACGTcount: A:0.43, C:0.15, G:0.13, T:0.28
Consensus pattern (20 bp):
TTGTATCGATACACAAAAAA
Found at i:63759 original size:13 final size:13
Alignment explanation
Indices: 63741--63778 Score: 58
Period size: 13 Copynumber: 2.9 Consensus size: 13
63731 CATTTTTCTT
63741 TGTATCGATACAA
1 TGTATCGATACAA
*
63754 TGTATCGATACAC
1 TGTATCGATACAA
*
63767 TATATCGATACA
1 TGTATCGATACA
63779 GGGGGATTAT
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 23 1.00
ACGTcount: A:0.37, C:0.18, G:0.13, T:0.32
Consensus pattern (13 bp):
TGTATCGATACAA
Found at i:63933 original size:20 final size:20
Alignment explanation
Indices: 63890--63935 Score: 58
Period size: 21 Copynumber: 2.2 Consensus size: 20
63880 AAATCTTTTG
63890 CAAAATACTTGTTTTTCACTT
1 CAAAATACTTGTTTTTCAC-T
*
63911 CAAATTACTTCGTTTTTCA-T
1 CAAAATACTT-GTTTTTCACT
63931 CAAAA
1 CAAAA
63936 CCAGCATCAA
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
20 5 0.23
21 9 0.41
22 8 0.36
ACGTcount: A:0.33, C:0.20, G:0.04, T:0.43
Consensus pattern (20 bp):
CAAAATACTTGTTTTTCACT
Found at i:65673 original size:39 final size:39
Alignment explanation
Indices: 65624--65710 Score: 99
Period size: 39 Copynumber: 2.3 Consensus size: 39
65614 TTTTTAGTAA
*
65624 AAGGGGAGAATCTATAAATTTGCTAAAATTA-TCTTA-TT
1 AAGGGGAGAATCTACAAATTTGCTAAAATTACT-TTAGTT
* * *
65662 AAGGGGAAGAATGTACGAATTTGTTAAAATTACTTTAGTT
1 AAGGGG-AGAATCTACAAATTTGCTAAAATTACTTTAGTT
65702 AA-GGGAGAA
1 AAGGGGAGAA
65711 AGAAAAGAAA
Statistics
Matches: 42, Mismatches: 4, Indels: 6
0.81 0.08 0.12
Matches are distributed among these distances:
38 10 0.24
39 27 0.64
40 5 0.12
ACGTcount: A:0.40, C:0.06, G:0.22, T:0.32
Consensus pattern (39 bp):
AAGGGGAGAATCTACAAATTTGCTAAAATTACTTTAGTT
Found at i:66378 original size:21 final size:20
Alignment explanation
Indices: 66332--66384 Score: 72
Period size: 19 Copynumber: 2.6 Consensus size: 20
66322 GTAGCCAAAC
**
66332 TTGTATCGATACACAAAGTA
1 TTGTATCGATACACAAAAAA
66352 -TGTATCGATACACAAAAAAA
1 TTGTATCGATACAC-AAAAAA
66372 TTGTATCGATACA
1 TTGTATCGATACA
66385 TTGGCTTGTA
Statistics
Matches: 29, Mismatches: 2, Indels: 3
0.85 0.06 0.09
Matches are distributed among these distances:
19 13 0.45
20 4 0.14
21 12 0.41
ACGTcount: A:0.43, C:0.15, G:0.13, T:0.28
Consensus pattern (20 bp):
TTGTATCGATACACAAAAAA
Found at i:68112 original size:475 final size:474
Alignment explanation
Indices: 67146--68228 Score: 1307
Period size: 475 Copynumber: 2.3 Consensus size: 474
67136 AACAGTTCCT
* * * * * *
67146 ATTCTTTTGAAGAGTAGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
1 ATTCTTTTAAAGATTGGGAAGCTAAAACGCATTCCTTTCTTTAGGATACATGATATTGATGCTTT
** * * *** ** * *
67211 GGTGTCATAAGAAAAGCTTTTATTTTCATTATTCTTTTTAGAATCAAAATTTGTCTCTTAAATAT
66 GGTGTCGCAAGAAAAGCTTTTCTTTCCACCCTT-TTGATAGAATCAAAGTTTGTCTCTTAAATAA
* *
67276 GACCAACACAAATACTCAAACAAACCCCCATTCTTTTCAGGATTAGGCAACATAAACATAGTCTT
130 GACAAACACAAATACTCAAACAAACACCCATTCTTTTCAGGATTAGGCAACATAAACATAGTCTT
* * *
67341 TACATTAGGATACACGATATTAATGCTTTGGTTTTGCAAGAAAGGAATTTTTCTCACCAATTTTT
195 TACATTAGGATACACAATATTAATGCTTTGGTTTCGCAAGAAAGGAATTTTTCACACCAATTTTT
*
67406 ATAAAGCCTAAGTTTATGCCTCAAATGAGACAAACATGGATTCTTGTAATGATCTTCATTCATTT
260 ATAAAGCCTAAGTTTATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTT
* * *
67471 TGTGATTAGGCACCATAAACACATTATTCTCATTAGGAAAATTGATATTGACGATTTTCTTTTGC
325 TGTAATTAGACACCATAAACACATTA-TCTCATTAGGAAAATTGATATTGACGATTTTCTATTGC
*** * * *
67536 ACGAAAATCTTTTCTTTGCCTTGTTTTTCTTAAAATCAAAGTTCATCCCTTAGATAAGATAAGCA
389 ACGAAAATCTTTTCTTTGCCCAATTTTTCTTAAAATCAAAGTTCATCCATTAAATAAGACAAGCA
** *
67601 TTGATTCTCGTAATAGTCTCT
454 TCAATTCTCGTAATAGTCTCC
*
67622 ATTCTTTTAAAGATTGGGAAGCTAAAATGCATTCCTTTCTTTAGGATACATGATATTGATGCTTT
1 ATTCTTTTAAAGATTGGGAAGCTAAAACGCATTCCTTTCTTTAGGATACATGATATTGATGCTTT
** *
67687 ACTGTCGCAA-AAAAGCTTTTCTTTCCACCGCTTTTGATAGAATCAAAGTTTGTCTCTTAAACAA
66 GGTGTCGCAAGAAAAGCTTTTCTTTCCACC-CTTTTGATAGAATCAAAGTTTGTCTCTTAAATAA
* * * * * * *
67751 GACAAACATAAATACTCATACTAATACCCATTCTTTTTAGGATTAGGCACCATAAACATTGTCTT
130 GACAAACACAAATACTCAAACAAACACCCATTCTTTTCAGGATTAGGCAACATAAACATAGTCTT
* * * **
67816 CT-CCTTAGGATACATAATATTAATGCTTTGGTTTC-CGAAGAAATGCTTTTTTCACACCAATTT
195 -TACATTAGGATACACAATATTAATGCTTTGGTTTCGC-AAGAAAGGAATTTTTCACACCAATTT
* * * *
67879 TTGTAAAGTCTAAGTTTATGTCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
258 TTATAAAGCCTAAGTTTATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
** ** *
67944 TTTGTAATTAGACATGATAAACACATTCA-CATCATTAGG-GTATATGATATTGATGATTTTCTA
323 TTTGTAATTAGACACCATAAACACATT-ATC-TCATTAGGAAAAT-TGATATTGACGATTTTCTA
** * * *
68007 TTGCTTGGAATTCTTTTCTTTGCCCAATTTTTCTTAAAGTCAAAGTTCATCCATTAAATAAGACA
385 TTGCACGAAAATCTTTTCTTTGCCCAATTTTTCTTAAAATCAAAGTTCATCCATTAAATAAGACA
*
68072 AGCGTCAATTCTCGTAATAGTCTCC
450 AGCATCAATTCTCGTAATAGTCTCC
* * * * * * * * *
68097 ATTTTTTTCAAGATTGGGAACCAAAAACACATTACCTTTATTAAGG-TATATGACT-TTGATGCC
1 ATTCTTTTAAAGATTGGGAAGCTAAAACGCATT-CCTTTCTTTAGGATACATGA-TATTGATGCT
* * * *
68160 TTGGTGTCGCAAGAAAACCTTTTCTTTCCACCATTTTAGATAGAATCAAAGTTTCTTTCTTAAAT
64 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCCTTTT-GATAGAATCAAAGTTTGTCTCTTAAAT
68225 AAGA
128 AAGA
68229 ATAACAAGAA
Statistics
Matches: 514, Mismatches: 83, Indels: 20
0.83 0.13 0.03
Matches are distributed among these distances:
474 4 0.01
475 385 0.75
476 125 0.24
ACGTcount: A:0.32, C:0.17, G:0.13, T:0.37
Consensus pattern (474 bp):
ATTCTTTTAAAGATTGGGAAGCTAAAACGCATTCCTTTCTTTAGGATACATGATATTGATGCTTT
GGTGTCGCAAGAAAAGCTTTTCTTTCCACCCTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAG
ACAAACACAAATACTCAAACAAACACCCATTCTTTTCAGGATTAGGCAACATAAACATAGTCTTT
ACATTAGGATACACAATATTAATGCTTTGGTTTCGCAAGAAAGGAATTTTTCACACCAATTTTTA
TAAAGCCTAAGTTTATGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT
GTAATTAGACACCATAAACACATTATCTCATTAGGAAAATTGATATTGACGATTTTCTATTGCAC
GAAAATCTTTTCTTTGCCCAATTTTTCTTAAAATCAAAGTTCATCCATTAAATAAGACAAGCATC
AATTCTCGTAATAGTCTCC
Found at i:70604 original size:475 final size:476
Alignment explanation
Indices: 68684--79129 Score: 11312
Period size: 475 Copynumber: 22.0 Consensus size: 476
68674 AATAACAAGA
* * * * * ** *
68684 ATTAGGCATCGTAAACATAGTCTTC-CTATAAAGATACAAGATATTGATGCTTTGGTTTTACTAG
1 ATTAGGCACCATAAACATAGTCTTCTC-ATTAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * * *
68748 AAAGGCATTTTTCCC-CTAATTTTTGTAAAGCCTAAGTTCGTGCCACAAATGAGATAAACATGGA
65 AAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * *
68812 TTCTTGTAATGAACTTCATTCATTTTGTGATTAGGCACCATAAATACATTCTCCTCATTAGGATA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * * * *
68877 AATGATACTAATGA-TTTTTTTCCATGGAAAACTTTTCTTTGCCTTATTTTCCTTAAAATCAATG
195 AATGATATTGATGATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* *
68941 TTCATCTCC-TAAAT-A-AC-AGTCATCGATTCTCGTAACTGTCTCCATTCTTTTCGAGATTGGG
260 TTCATC-CCTTAAATAAGACAAG-CATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGG
* * ** * * * * * *
69002 AAAG-AAAAACACCTTCAATTTATTAGGAGACATGAAATTGATGCTCTCGTGCCGCAAGAAAAGC
323 -AAGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * * * **
69066 TTTTTTTTTTCACCATTTTTGATAGAATCAAGGTTTGTCTCTTAAGTGTGACAAACATGAATACT
387 -TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
*
69131 TATACTAATCCCCATTC-TTTTCAGG
451 CATACTAATCCCCATTCTTTTTCAGG
* * *
69156 ATTAGGCACCATAAACATAGTCGTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * *
69221 AAGGCATTTTTCCCACCTATTTTTGTAAAGCCTATGTTCATGCCTCAAATGAGACAAACATAGAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * * **
69286 TC-ATGTAATGATCTTTATTCATTTTGTCATTATGCACCATAAACCCGCTCTCCTCATTAGGATA
131 TCTA-GTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * * * *
69350 AATGATATTAATGATTTTCTTTTGCATGAAAATCTTTTCTTTACTCTATTTTCCTTGAAATGAAA
195 AATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * ** * * * * *
69415 GTTCATCCATTAAATATGATAAGTATCGATTCTAATAACAATATCTATTCTTTTCGATATTGGGA
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * * * * * * * *
69480 ACCAAAAATACCTTCACTTTATTAGGAGACATGACACTGATGCTTTGATGTCACAAGAAAAGCTT
324 AGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* * * * *
69545 TT-TTTCCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAAAACAAACATAAATACTCA
389 TTCTTT-CCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
* *
69609 TACTAATCCCTATTC-CTTTCAGG
453 TACTAATCCCCATTCTTTTTCAGG
* * * * * *
69632 ATTAGGGATCGTAAACATAGTCTTCTCATTAGGATCCATGATATTGGTGCTTTGGTTTTGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * * * * *
69697 AAAGCTTTTCTCACACCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAAAGAGATAAGCATGAAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * * * * *
69762 TCTAGTAACGATCTTCATTCATTCTGCGATTAGGCACTATAAACACATTTTTCTCATTAGGATTA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* ** *
69827 ATGCTATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTATCCTATTTTCCTCAAAATCAAAG
196 ATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
** * * * * * * ** * *
69892 TTCATCTTTTAAATAGGATAGGCATCAATTCTCATAACACTCTCCATTCTTTTTTACATTGGTAA
260 TTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA
* * * *
69957 CCAAAAACA-ACTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
325 GCTAAAACACA-TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* * * * * ** *
70021 TTCTTTCTACAATTTTTTATAGAATCAAATTTTATCTCTTCCATAAGACAAACTTGAATACTCAT
389 TTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
*
70086 ACTAATCCCCATTCTTTTCCA-G
454 ACTAATCCCCATTCTTTTTCAGG
* * * * **
70108 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATTCATGGTATTAATGCCTTGGTTTAACAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * ** *
70173 AAGGCCTTCTTCCCACCAATTTCGGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACTTGGAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * *
70238 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACACTCTCCTTATTAGGAAAA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* * *
70303 ATGATATTGATGATTTTTTTTGTATGAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGT
196 ATGATATTGATGATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGT
* * ** * * * *
70368 TCA-CCCTTTAAATAAGATAAGTATTC-ATTCTCGTAACAACCTCTATTTTTTTAAATATTGGGA
261 TCATCCC-TTAAATAAGACAAGCA-TCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * *
70431 AGCTAAAACGCAATCCCTT-ATTGAGGATACATGACATTGATGCTTAGGTGTCGCAAGAAAATG-
324 AGCTAAAACACATTCCCTTCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA-GC
* * * * * * * * * * *
70494 TCTTATTTCCACTATTTTCGATAGAATTAAGGTTTATTTGTTAAATAAGATAAACTTGAATACTC
387 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* *
70559 ATACTAATCCTCATTCTTTTTC-GT
452 ATACTAATCCCCATTCTTTTTCAGG
* * * *
70583 ATTGGGCACCATAATCATAGTCTTCT-ATTATGATACATAATATTGATGCTTTGGTTTCGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
70647 AAGGCTTTCTTCCCACCAATTTTGGTAAAGTTTAAGTTCATGCCTTAAATGAGACAAACATGGAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * *
70712 TCTAGTAATAATCTTCATTCATTTTGTGATTAGGCACCATGAACACACTCTCCTCATTAGGACAA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* * * * * * *
70777 ATGATATTGATAAATTTTTTCTGCATGGAAATCTTTTCTTAGCCTTGTTTTGCATAAAATCAAAG
196 ATGATATTGAT-GATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* * * * *
70842 TTCATCCCTTAAATAAGACAAGTATTGATTCTCGTAACAGCCTCCATTCTTTTAAAGATTAGGAA
260 TTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA
* * * *
70907 GCTAAAACGCAATCCCTTC-TTAAGGATACATGACATTGATGCTTTAGTGTCAG-AAGAAAAACT
325 GCTAAAACACATTCCCTTCATT-AGGATACATGACATTGATGCTTTGGTGTC-GCAAGAAAAGCT
* *
70970 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACTTGAATACTCA
388 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
* *
71035 TACTAATCCCCATTCTTTTCCA-A
453 TACTAATCCCCATTCTTTTTCAGG
* * * * ** *
71058 ATTAGGCACCATAAACATAGTCTTCTCGTTAGGAAATACGGCATTGATGCTTTGGTTTCACAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
71123 AAGGCTTTCTTCCCACCCATTTTGGTAAAGTCTAAGTTTGTGCCTCAAATAAGACAAACATGGAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
** * * * *
71188 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTGTAAGCACGTTCTTCTCATTAGGAAAA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* *
71253 ATGCTATTAATGATTTTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
196 ATGATATTGATGA--TTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * * *
71318 GTTCACCCCTTAAATAAGGCAAGTATCGATTCTCATAACAGCCTCCATTCTTTTAAAGATTGGGA
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * ** *
71383 AGCTAAAACGCAATCCCTT-TTTAGG-GGCATAGGACATTGATGCTTTAGTGTCGCAAGAAAAGC
324 AGCTAAAACACATTCCCTTCATTAGGATACAT--GACATTGATGCTTTGGTGTCGCAAGAAAAGC
* *
71446 -TTTCTTTCCACCATTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAAC-TCGAATACT
387 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACAT-GAATACT
*
71509 CATACAAATCCCCATTCTTTTTCA-G
451 CATACTAATCCCCATTCTTTTTCAGG
* * * * *
71534 ATTAGGCACCATAAACATAGTCTTCTTAGTAGGATACACGGTATTTGAAGCTTTGGTTTCGCAAG
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATA-TTGATGCTTTGGTTTCGCAAG
* * * *
71599 AAAGACTTTCTTCCCACCAATTTTGGTAAAGTGTAAGTTCGTGCCTCAAATGAGACAAACATGGA
65 AAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* ** ** *
71664 TTCTAGTAATGATCTTCATTTATTTTGTGATTAGGCACTGTAAGGACATTCTCCTCATTAGGAAA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * *
71729 AATGATATTGTTGAGTTTCTTTTGCATGGAAATCTTTTATTTGCCCTATTTTCCTCAAAATCAAA
195 AATGATATTGATGA-TTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
** * * *
71794 GTTCATCCCTTAAATAAGACAAGCATCGATTCTTATAACAGTCTCCATTCTTATAAAGATTAGGA
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * * * * * * * * * *
71859 AGCTAAAACGCACTCCTTTCTTTACGATGCATGATATCGATGCTTTTGTATCGCAAAAAAAGCAT
324 AGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* * * * * * * *
71924 TTGTTGCCACCGTTTCTGATAGAATCACAGTTTGTTTGTTAAATAAGAGAAACATGAATACTCAT
389 TTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
*
71989 ACTAATCCTCATT-TTTTTCAGG
454 ACTAATCCCCATTCTTTTTCAGG
* * * * * * *
72011 ATTAGGCACTACAAATATAGTTTTCTCCTTAGGATACATGATATTGATGCTTTGGTTTTGTAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * ** **
72076 AAGGCTTTTTTCACA-CAACTTTTTGTAAAGTCTATGTTCGT-TTTCGTAAATGAGACAAACACA
66 AAGGCTTTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTCGTGCCTC--AAATGAGACAAACATG
* * * *
72139 AATTCTAGTAATGATCTTCATTTATTTTGTAATTAGGCACTATAAACACATTCTCCTCATTAGGA
128 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGA
* * * * * *
72204 TAAATTATATTGAAGATTTTCTTTTCCATGAAAATCTTTT-GTTGTCCTATTTTCCTTAAAATCA
193 TAAATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * * *
72268 AAGTTCAT-CCTTAAATAATACAAGGATCGATTCTTGTAATAGGT-TCAATTCTTTTGAAGATTG
257 AAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACA-GTCTCCATTCTTTTCAAGATTG
* * * *
72331 GGAAGCTAAAACACATTCCCTTCATTCGGATACATGACATTGATGCTTTGGTGTCACAGGAAAAA
321 GGAAGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * *
72396 CTTTTCTTTCCACCAATTTTT-ATAGAATCAAAGTTTGTCTCTTGAATAAGAAAAAGATGAATAT
386 CTTTTCTTTCCACC-ATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
* * *
72460 TCATTCTAATCTCCATTC-TTTTCTGG
450 TCATACTAATCCCCATTCTTTTTCAGG
* * *
72486 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGATGCATTGGTCTTC-CAAG
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-TTCGCAAG
* * * * * * * ** *
72550 AAAAGCATTTTTCCTAGCAATTTTTATAAAG-CTTAAGTTCATGCCTTAAAAAAGATAAACATGG
65 AAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
72614 ATTCTTGCAATGATCTTCATTCATTTTGTGATTATGCACCATAAACACATTTTCCTTATTAGGAT
129 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGAT
* ** *
72679 AAATGATATTGATGATTATTTTTCGCATCAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
194 AAATGATATTGATGATT-TTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAA
* * * * * * * *
72744 GGTTCATCCCTTAAATAAAACAAGCATCGATTCTCATAATAGTCTCTATTTTTTTCCAGATTGAG
258 AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGG
* * * * *
72809 AACCAAAAACACATTCCTTTCATTAGGTTACATGACATTGATGCTTTGGTGTCACAAGAAAAGCT
323 AAGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
* * * *
72874 TTTTTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCTTAAAAAAGACAAACATGAATACTTA
388 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
*
72939 TACTAATCCCCATTC--TTCCAAGG
453 TACTAATCCCCATTCTTTTTC-AGG
* * * * * * *
72962 GTAAGGCACCGTAAACATAG-CATGCTCCTTAGAATACATGAAATTGATGCTTTGGTTTCGCAAG
1 ATTAGGCACCATAAACATAGTC-TTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAG
* * * *
73026 AAAGG-TCTTTTCGCACCAATTTTTGTAAAGTCTAAGTTCATCTCCT-AAATGAGACAAACATGG
65 AAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGT-GCCTCAAATGAGACAAACATGG
* * * * * * *
73089 ATTCTAGTAATGATCATCATTCATTGTGTAATAAGGCACTATAAACACATTCTCCTTATTAAGAT
129 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGAT
* * * * * * *
73154 AAATGATATTAAAGATTTTCTTTTCCAT-GAAATTCTTTTCTTCGCTCTATTTTCCTTAAAGTAA
194 AAATGATATTGATGATTTT-TTTTGCATGGAAA-TCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * * *
73218 AACTTCATCCCTTAAATAAGATAAGCATCGATTCTTGTAATAGTCTCTATTATTTTCAAGATTGG
257 AAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGG
* * ** * *
73283 GAACCAAAAACACATTTGCTTCATTAGGATACATGACATTGATGCTTCGGTGAT-GCAGGAAAAG
322 GAAGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG-TCGCAAGAAAAG
* * * * *
73347 CTTTTCTTTCTACCGTTTTTGATAGAATCACAGTTTGTATGTTAAATAAGACAAACATGAATACT
386 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
**
73412 CATACTAATCCCCATTC-TTTTCAAT
451 CATACTAATCCCCATTCTTTTTCAGG
* * * * * * *
73437 ATTAGGCACTATAAACATAGTTTTCTCCTTAGGATACATGATATTTAGGCTTTGGTTTCGTAAAA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *** * *
73502 AAGGC-TTTTTCACACCAATTATTGTAAAGTCTACGTTCCTTTTTGTAAATGAGAGAAACATGGA
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCT-CAAATGAGACAAACATGGA
* * *
73566 TTCTAGTAATGATCATCATTCATTTTGTAATTAGGCACTATAAACACATTCTCCTCATTAGGATA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * * * * *
73631 AATTATATTGAAGATTTTCTTTTTCGTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAAA
195 AATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * * *
73696 GTTCATCCCTTAAATAATACGAGGATCGATTCTTGTAATAGTCTCCATTCTTTTGAAGATTGGGA
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
** * * *
73761 AGCTAAAACGTATTCCTTTCATTCA-GATGCATGACATTGATGCTTTGGTGTCGCAAAAAAAGCT
324 AGCTAAAACACATTCCCTTCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
* * *
73825 TTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAAT-----AAACATGAGTAGTCA
388 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
**
73885 TACTAATTTCCATTC-TTTTCAGG
453 TACTAATCCCCATTCTTTTTCAGG
* * * *
73908 ATTAGGCACCATAAACATAGTCTTCACATTAGGGTATACGATATTGATGCTTTGGTTTCGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* ** * * *
73973 AAGGCATTTTTCCCACCAATTTTTGTAAACCCTATGTTCGTGCCTCCAGTGAGACAAACATGGAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * * * * *
74038 TC-ATGTAATGATCTTTATTCATTTTATCATTATGCATCATAAACCCATTCTCCTCATTAGGATA
131 TCTA-GTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * **
74102 AATGATATTGATGATTTTTTTTTGTATGGAAATATTTTCTTTGCCCTATTTTCCTTGAAAGGAAA
195 AATGATATTGATGA-TTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
** * * * *
74167 GTTCATCTATTAAATAAGACAAGCATCGATTCTCATAATAGTCTCTATTCTTTTCGAGATTGGGA
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * * * * *
74232 ACCAAAAATACCTTCACTTTATTAGG----A-GACA-TGA--C----AT-T-----GAAAAGCTT
324 AGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* *
74279 GTT-TTTCCACCATTTTTGAAAGAATCAAGGTTTGTCTC-TAAAGTAAGACAAACATGAATACTC
389 -TTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAA-TAAGACAAACATGAATACTC
* * *
74342 ATACTAATTCCTATTCCTTTT-AGG
452 ATACTAATCCCCATTCTTTTTCAGG
* * * *
74366 ATTAGGCACCGTAAACATAGTCTTCTCATTAGGATCCATGATATTGGTGCTTTGGTTTTGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
74431 AAAGCTTTTCTCACACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACATGAAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* *
74496 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTTTCCTCATTAGGATAA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* *
74561 ATGTTATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTATCCC-ATTTTCCTTAAAAATCAA
196 ATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTT-GCCCTATTTTCCTT-AAAATCAA
* * * * * ** *
74625 AGTTCATCCCTTAAATAAGACATGCAACAATTCTAGTAACAATCTCCATTCTTTTTGAGATTGGT
258 AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGG
* ** ** *
74690 AA-CCAAAAGCA-ACTTCAATTCATTAGGAGGCA-G-CATTGATGCTTTGCTGTCGCAAGAAAAG
323 AAGCTAAAA-CACA-TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * *** *
74751 CTTTTCTTTCCACCGTTTTTGTTAGAATTAAATTTTATCTCTTCCGTAAGACAAACTTGAATACT
386 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
*
74816 TATACTAATCCCCATTC-TTTTCTA-G
451 CATACTAATCCCCATTCTTTTTC-AGG
* * ** * * * * * *
74841 ATAAGACACTGTAAACAGAGTCTTCTCATTAGGATACACGGTATTGATGCCTTAGTTTCACAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
74906 AAGGCCTTCTTCCCACCAATTTTGGTAAAATCTAAGTTCGTGCCTCAAATGAGACAAACTTGGAT
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * *
74971 TCTAGTAATGATCTTCATTCATTTTGCGATTAGGCACCATAAACACATTGTCCTCATTAGGAAAA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* *
75036 ATGATATTAATGATTTTTTTTTTGCATGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
196 ATGATATTGATGA--TTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * *
75101 GTTCA-CCCTTTAAATAAGATAAGTATCGATTCTCGTTACAGTCTCCATTATTTTAAAGATTGGG
259 GTTCATCCC-TTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGG
* * * * * *
75165 ATGCTTAAACGCAATCCCTT-ATTGAGTATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGT
323 AAGCTAAAACACATTCCCTTCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * * * * * * * * * *
75229 TTTTCTTTCTACCGTGTTCGATAGAATCAAGGTTTATTTTTTAAATAAGATAAACTTGAATACTT
387 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
*
75294 ATACTAATCCCCATTCTTTTTC-GA
452 ATACTAATCCCCATTCTTTTTCAGG
* * * * * *
75318 ATTGGGCACCATAATCATAGTTTTCTCATTACGATATAGGATATTGATGCTTTGGTTTCGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * *** * * *
75383 AAGACTTTCTTCCC-CCTAATGTTGGTAAAGTCTAAGTTCACACCTTAAAGGAGACAAAGATGGA
66 AAGGCTTTTTTCCCACC-AATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* ** * *
75447 TTATAGTAACAATCTTCACTC-TTTCTGTGATTAGGCACCATAAACGCACTT-TCCTCATTAGGA
130 TTCTAGTAATGATCTTCATTCATTT-TGTGATTAGGCACCATAAACACA-TTCTCCTCATTAGGA
* * * *
75510 AAAATGATATTGATGATTTTTTTTTTGCATGGAAATCTTTTATTAGCCCTACTTTCCTTAAAATC
193 TAAATGATATTGATGA--TTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC
* * * * * *
75575 AAAGTTCATCCCTTAAATAAGACAAGTATTGATTCTCGTAACAGCCTCCATTTTTTTAAAGATTA
256 AAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTG
* * * ** *
75640 GGAAGCTAAAGCGCAATCTTTTC-TTGAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAA
321 GGAAGCTAAAACACATTCCCTTCATT-AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA
* * * *
75704 ACTTTT-TTT-CACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATTAGACAAACTTGAATAC
385 GCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATAC
* *
75767 TTATACTAATCCCCATTTTTTTTC-GG
450 TCATACTAATCCCCATTCTTTTTCAGG
* * * * * *
75793 ATTAAGCACCATAAACATAGTCTTCTCATTA-GATATACGGTATTAATGCTTTGGTTTTGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * *
75857 AAGG-TTTTCTTCCAACCAATTTTGGTAAAGTCTAAGTTCGTGCCTCAAATGAAACAAACATGGA
66 AAGGCTTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * * *
75921 TTCTAGTAATAATCTTCATTCATTTTGTGATTAGGCACTATAAACACACTCTCCTCATTCGGAAA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * * *
75986 AATGATATTAATGATTTTTTTTGCATGGAAATCTTTTGTTAGCCTTATTTTCCTTAAAATCAAAA
195 AATGATATTGATGATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* **
76051 TTCATCCCTTAAATAAGACAAGTATCGATTCTCGTAACAACCTCCATTCTTTTCAAGATTGGGAA
260 TTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAA
* * * *
76116 CCAAAAACACATTCACTTCATTAGGATACATGACATTGGTGCTTTGGTGTCGCAAGAAAAGCTTT
325 GCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTT
* * * *
76181 TCTTTCCACCATTTTTGATAGAATCACAGTTTGTCTGTTAAATAAGACAAACATGAGTACTTATA
390 TCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATA
*
76246 CTAATCCCTATTC-TTTTCAGG
455 CTAATCCCCATTCTTTTTCAGG
* * * * * ***
76267 ATTAGGCACTATAAGCATAGTTTTCTCCTTAGGATACAAGATATTGATGCTTTGGTTTCATGAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * **
76332 AAGGCTTTTTTCACACCAATTTTTGTAAAGTTTGAGTTCGT-TTTCGTAAATGAGACAAACATGG
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTC--AAATGAGACAAACATGG
* * * * *
76396 ATTCTAGAAATGATCTTCATTCATTTTGTCATTAGGCACTATAAATACATTCTCCTCATTACGAT
129 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGAT
* * * * * *
76461 AAATTATATTGAAGA-TTTTTTTCCATGGAAATC-TTTCTTTACCCTATTTTCCTTAAAGTCAGA
194 AAATGATATTGATGATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * ** *
76524 GTTTATCCCTTAAATAATATGAAG-ATCGATTCTTATAACAGTCTCCATTCTTTTGAAGATTGGG
259 GTTCATCCCTTAAATAAGA-CAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGG
* * * * * *
76588 AAGCTAAAACCCTTTCCCTTCATTCGGATACATGATATTGATGCTTTGGTGTTGCAAAAAAAGCT
323 AAGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
* * * **
76653 TTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAGTGGTCA
388 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
**
76718 TACTAATTTCCATTC-TTTTCTA-G
453 TACTAATCCCCATTCTTTTTC-AGG
* * * * * *
76741 ATTAGGGAACATAAACATAGTGTTCTCATAAGGATAC-TTAGCATTGATGCTTTGGGTTTC-CAA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGA-TATTGATGCTTT-GGTTTCGCAA
* * * * *
76804 GGAAGGCATTTTTCCCACCAATTTTTGTACAG-CTTAAGTTCTTGCCTCAAAAGAGACAAACATG
64 GAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTCAAATGAGACAAACATG
* *
76868 GATTCTTGTAATGATCTTCATTCATTTTGTGATTACGCACCAT-AACACATTCTCCTCATTAGGA
128 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGA
* * *
76932 TAAATGATATTGATGATTTTCTTTTGCATTGAAATTTTTTCTTTGCCCCATTTTCCTTAAAATCA
193 TAAATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCA
* * * * * *
76997 AAGCTCATCCCTTAAATAAAACAAGTATCGATTCTCGTAATAGTCTCTATTCTTTTCGAGATTGG
257 AAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGG
* * *
77062 GAACCAAAAACACATTCCCTTCACTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
322 GAAGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * *
77127 TTTTTTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGGATACTC
387 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
*
77192 ATACTAATCCCCATT-GTTTTCAGG
452 ATACTAATCCCCATTCTTTTTCAGG
* * * **
77216 ATTAGGCACCGTAAACATAGTCTGCTCTTTAGGATACATGATATTGATGCTTTGGTTTTACAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * **
77281 CAGGTTTTTTTCGCAGTAATTTTTGTAAAGTCTAAGTTCGTGTCCT-AAATGAGACAAACATGGA
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTG-CCTCAAATGAGACAAACATGGA
* * **
77345 TTCTAGTAATGATCTTCATTCATTTTGTAATTAGGCACTATAAACACATTCTCCTTGTTAGGATA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * * * *
77410 AATGATATTAAAGATTTCCTTTTGCATGGAAAGCTTTTCTTTGCCCTATTTTCCTTAAAGTAAAA
195 AATGATATTGATGATTT-TTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * * * * *
77475 GTTCATCCCTTAATTAAGATAAGCATCGATTTTTGTAATAATCTCTATTCTTTTTAAGATTGGGA
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
** * *
77540 A-CTAAAACCACATTTGCTTTATTAGGATACATGACATTGATGCTTTGGTGTCGGAAGAAAAGCT
324 AGCTAAAA-CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
* ** * *
77604 TTTCTTTCCACCCTTTTAAATAGAATCAAAGTTTATCTCTTAAATAAGA-AAAGCATGAATAGTC
388 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA-CATGAATACTC
* *
77668 ATACTAATCTCCATTC-TTTTCTGG
452 ATACTAATCCCCATTCTTTTTCAGG
* * * * *
77692 ATTAGGCACCATAAACATAGTCTTCACATAAGGATACACGATATTGATGCTTTGGTTTTGTAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * * * * *
77757 AAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGTCTCAAATGAGACAAACATGGAC
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
* * *
77822 TCTTGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTAATTAGGGTAA
131 TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
* * *
77887 CTGATATTGATGATTTTCTTTT-CAAGGAAATCTTTTCTTTGCCCTACTTTCCTTAAAATCAAAG
196 ATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAG
* * ****
77951 TTCATCCTTTAAATAAGACAAGCATCGATTCTCATAACCA-AAAACATTCTTTTCAAGATTGGGA
260 TTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAA-CAGTCTCCATTCTTTTCAAGATTGGGA
* * * * *
78015 A-CCAAAATCACCTTCACTTCATTAGGAGACATGACATTAATGCTTTGGTGTCGCAAGAAAAGCT
324 AGCTAAAA-CACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
* * * * *
78079 TTTCTTTCCACCGTTGTTT-ATAGAATCAAGGTTTGTCTCTTAAGTAAGTCAAACATGGATACTC
388 TTTCTTTCCACCATT-TTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
*
78143 ATACTAATCCCCATTC-TTTTCAAG
452 ATACTAATCCCCATTCTTTTTCAGG
* * * * * *
78167 ATTAGGCACCGTTAACATAGTCTTCACATTAGGATACACGATCTTGATGCTTTGGTTTCGTAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
* * *
78232 AAGGCATTTTTCCCACCAATTTTTGTAAAG-CATAAGTTCGTGCCTCAAATGAGACAAACTTAGA
66 AAGGCTTTTTTCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * ** * *
78296 TTTTTGTAATGATCTTCATTCAATTTGTGATTACTCACCATAAACACATTCTTCTTATTAGGATA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * **
78361 AAAGATATTGATGACTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGGAATCAAA
195 AATGATATTGATGA-TTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* ** * * * * * *
78426 GGTCATCCCACAAATAAGACAAGCACCGATTCTCATAATAGTCTCCATTGTTTTCGAGATTGGGT
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * * * * * *
78491 ACCAAAAACTCCTTCACTTCATTAAGAGACATGGCATTGATGCTTTGGTGTCGCAAGAAAAGCTT
324 AGCTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* * * * *
78556 TTCCTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAACACGAATGCTCA
389 TTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATAAGACAAACATGAATACTCA
* *
78620 TACTAATCTCTATTC-TTTTCAGG
453 TACTAATCCCCATTCTTTTTCAGG
* * * *
78643 ATTACGCACCATAAACATAGTCTTCTCATTAGGA-ACCATGGTATTGATGCTTTCGTTTTGCAAG
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATA-CATGATATTGATGCTTTGGTTTCGCAAG
* * *
78707 AAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACCTGGA
65 AAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * *
78771 TTCTAGTAATGATCTTCATTCATCTTGTGATTAGGCACTATAAACACATTCTCCCCTTTAGGATA
130 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * * * *
78836 AAGGATATTGATGATTTTCTCTTGTATGGAAATCATTTCTTTGTCCTATTTTCCTTAAAATCAAA
195 AATGATATTGATGATTTT-TTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * * ** * *
78901 GTTCATCCCTTAAATAAGACAAGCATCAATTCCCATAACCGTCTCCATTCTTTTTGAGATTAGGT
259 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * * * *
78966 A-CCAGAAACA-ACTTCACTTTATTAGGAGACATGACATTGATGCTTTGGGGTTGCAAGAAAAGC
324 AGCTA-AAACACA-TTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * * * *
79029 TTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTATCTCTTTAATAAGACAAACTTGAATACTT
387 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
* * *
79094 ATACTAATACCCATTCTTTTCCA-A
452 ATACTAATCCCCATTCTTTTTCAGG
79118 ATTAGGCACCAT
1 ATTAGGCACCAT
79130 GTCAGCTCTA
Statistics
Matches: 8433, Mismatches: 1360, Indels: 359
0.83 0.13 0.04
Matches are distributed among these distances:
452 4 0.00
453 41 0.00
454 2 0.00
457 4 0.00
458 243 0.03
459 82 0.01
462 2 0.00
463 6 0.00
465 4 0.00
466 4 0.00
467 1 0.00
469 1 0.00
470 3 0.00
471 279 0.03
472 295 0.03
473 182 0.02
474 834 0.10
475 2849 0.34
476 2542 0.30
477 1038 0.12
478 17 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (476 bp):
ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGA
AAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAA
ATGATATTGATGATTTTTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGT
TCATCCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAG
CTAAAACACATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTT
CTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATAC
TAATCCCCATTCTTTTTCAGG
Found at i:70787 original size:158 final size:159
Alignment explanation
Indices: 69143--74114 Score: 890
Period size: 159 Copynumber: 31.4 Consensus size: 159
69133 TACTAATCCC
* * * *
69143 CATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCGT-CACATTAGGATACACGATATTGATG
1 CATTCATTTT-AGTGATTAGGCACCATAAACACAGTC-TCCTCATTAGGATAAATGATATTGATG
* * * * *
69205 CTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCTATTTTTG-TAAAGCCTATGTTCATGCCTCA
64 CTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACC-AATTTTGATAAAGTCAAAGTTCATGCCTTA
* * *
69268 AATGAGACAAACATAGATTC-ATGTAATGATCTT
127 AATAAGACAAACATGGATTCTA-GTAATAATCTT
* * * * * *
69301 TATTCATTTT-GTCATTATGCACCATAAAC-CCGCTCTCCTCATTAGGATAAATGATATTAATGA
1 CATTCATTTTAGTGATTAGGCACCATAAACACAG-TCTCCTCATTAGGATAAATGATATTGATGC
** * * ** * * ** *
69364 TTTTCTTTTGCATGAAAATCTTTTCTT--TACTCTATTTTCCTTGAAA-TGAAAGTTCAT-CCAT
65 TTTGGTTTCGCAAGAAAGGC-TTTCTTCCCAC-CAATTTT-GAT-AAAGTCAAAGTTCATGCC-T
* * ** * * * *
69425 TAAATATGATAAGTATCGATTCTAATAACAAT-AT
125 TAAATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * ** * * * * * * *
69459 CTATTC-TTTTCGAT-ATTGGGAACCAAAAATACCTTCACTTTATTAGGAGACATGACACTGATG
1 C-ATTCATTTTAG-TGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATG
* * * * * ** *
69522 CTTTGATGTCACAAGAAAAGCTTTTTTTCCCACCGTTTTTGATAGAA-TCAAGGTT--TGTCTCT
64 CTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTGATA-AAGTCAAAGTTCATG-C-CT
* * ** * * *
69584 TAAGTAAAACAAACATAAATACTCA-TACTAATC-C
125 TAAATAAGACAAACATGGATTCT-AGTAATAATCTT
* * * * * * * ** *
69618 CTATTCCTTTCAG-GATTAGGGATCGTAAACATAGTCTTCTCATTAGGATCCATGATATTGGTGC
1 C-ATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGC
* * * * * ** *
69682 TTTGGTTTTGCAAGAAAAGCTTT-TCTCACACCAATTTTTG-TAGAGTCTAAGTTTGTGCCTCAA
65 TTTGGTTTCGCAAGAAAGGCTTTCT-TCCCACCAA-TTTTGATAAAGTCAAAGTTCATGCCTTAA
* * * **
69745 A-AGAGATAAGCATGAATTCTAGTAACGATCTT
128 ATA-AGACAAACATGGATTCTAGTAATAATCTT
* * * * * * * * *
69777 CATTCATTCT-GCGATTAGGCACTATAAACACATTTTTCTCATTAGGATTAATGCTATTGATGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
** * * * * * ** * *
69841 TTTCTTTTGCATGGAAA-TCTTTTCTT--TATCCTATTTTCCTCAAAATCAAAGTTCAT-CTTTT
66 TTGGTTTCGCA-AGAAAGGC-TTTCTTCCCA-CCAATTTTGAT-AAAGTCAAAGTTCATGC-CTT
* * ** ** * * *
69902 AAATAGGATAGGCATCAATTCTCA-TAACACTCTC
126 AAATAAGACAAACATGGATTCT-AGTAATAATCTT
* * * * * * * *
69936 CATTC-TTTT-TTACATT-GGTAACCAAAAACA-ACT-TCACTTCATTAGGAGACATGACATTGA
1 CATTCATTTTAGT-GATTAGG-CACCATAAACACAGTCTC-C-TCATTAGGATAAATGATATTGA
* * * * * * *
69996 TGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTA-CAATTTTTTATAGAA-TCAAATTTTAT-CT
62 TGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAA-TTTTGATA-AAGTCAAAGTTCATGC-
** * * * * **
70058 CTTCCATAAGACAAACTTGAATACTCA-TACTAATCCC
123 CTTAAATAAGACAAACATGGATTCT-AGTAATAATCTT
*** * * ** * * *
70095 CATTC-TTTTCCAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATTCATGGTATTAATGCC
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
** * * * * * * *
70159 TTGGTTTAACAAGAAAGGCCTTCTTCCCACCAATTTCGGTAAAGTCTAAGTTCGTGCCTCAAATG
66 TTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGATAAAGTCAAAGTTCATGCCTTAAATA
* *
70224 AGACAAACTTGGATTCTAGTAATGATCTT
131 AGACAAACATGGATTCTAGTAATAATCTT
* * * *
70253 CATTCATTTT-GTGATTAGGCACCATAAACACACTCTCCTTATTAGGAAAAATGATATTGATGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
* * * * ** ** * ** * *
70317 TT-TTTTTGTATGAAAATCTTTTCTTTAC-CCTATTTTCCTTAAAATCAAAGTTCA-CCCTTTAA
66 TTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTT-GATAAAGTCAAAGTTCATGCC-TTAA
* ** ** * * *
70379 ATAAGATAAGTATTCATTCTCGTAACAA-CCT
128 ATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * * * * * *
70410 CTATT-TTTTTAAAT-ATTGGGAAGC-TAAAACGCAATC-CCTTATTGAGGATACATGACATTGA
1 C-ATTCATTTT-AGTGATTAGGCACCAT-AAACACAGTCTCCTCATT-AGGATAAATGATATTGA
* * * * * * * *
70471 TGCTTAGGTGTCGCAAGAAAATGTCTTAT-TT-CCA-CTATTTTCGATAGAA-TTAAGGTTTATT
62 TGCTTTGGTTTCGCAAG-AAA-GGCTT-TCTTCCCACCAATTTT-GATA-AAGTCAAAGTTCATG
** * * * * * *
70532 TGTTAAATAAGATAAACTTGAATACTCA-TACTAATCCT
122 CCTTAAATAAGACAAACATGGATTCT-AGTAATAATCTT
* * * * * * * * *
70570 CATTCTTTTTCGT-ATTGGGCACCATAATCATAGTCTTCT-ATTATGATACATAATATTGATGCT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
* ** *
70633 TTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGGTAAAGTTTAAGTTCATGCCTTAAATG
66 TTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGATAAAGTCAAAGTTCATGCCTTAAATA
70698 AGACAAACATGGATTCTAGTAATAATCTT
131 AGACAAACATGGATTCTAGTAATAATCTT
* * * **
70727 CATTCATTTT-GTGATTAGGCACCATGAACACACTCTCCTCATTAGGACAAATGATATTGATAAA
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGAT-GC
* * ** *** * *
70791 TTT--TTTCTGCATGGAAA-TCTTTTCTTAGC-CTTGTTTTGCATAAAATCAAAGTTCATCCCTT
65 TTTGGTTTC-GCA-AGAAAGGC-TTTCTTCCCACCAATTTTG-ATAAAGTCAAAGTTCATGCCTT
** * * * ** *
70852 AAATAAGACAAGTATTGATTCTCGTAACAGCCTC
126 AAATAAGACAAACATGGATTCTAGTAATAATCTT
** * * * * * *
70886 CATTC-TTTTAAAGATTAGGAAGC-TAAAACGCAATC-CCTTC-TTAAGGATACATGACATTGAT
1 CATTCATTTTAGTGATTAGGCACCAT-AAACACAGTCTCC-TCATT-AGGATAAATGATATTGAT
* * ** * * *
70947 GCTTTAGTGTCAG-AAGAAAAACTTTTCTTTCCACCATTTTTGATAGAA-TCAAAGTTTAT-CTC
63 GCTTTGGTTTC-GCAAGAAAGGC-TTTCTTCCCACCAATTTTGATA-AAGTCAAAGTTCATGC-C
* * * * **
71009 TTAAATAAGACAAACTTGAATACTCA-TACTAATCCC
124 TTAAATAAGACAAACATGGATTCT-AGTAATAATCTT
**** * * * * **
71045 CATTC-TTTTCCAAATTAGGCACCATAAACATAGTCTTCTCGTTAGGA-AATACGGCATTGATGC
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAA-ATGATATTGATGC
* * * * ** *
71108 TTTGGTTTCACAAGAAAGGCTTTCTTCCCACCCATTTTGGTAAAGTCTAAGTTTGTGCCTCAAAT
65 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGATAAAGTCAAAGTTCATGCCTTAAAT
*
71173 AAGACAAACATGGATTCTAGTAATGATCTT
130 AAGACAAACATGGATTCTAGTAATAATCTT
** * * * * *
71203 CATTCATTTT-GTGATTAGGCACTGTAAGCAC-GTTCTTCTCATTAGGAAAAATGCTATTAATGA
1 CATTCATTTTAGTGATTAGGCACCATAAACACAG-TCTCCTCATTAGGATAAATGATATTGATG-
* ** * * * ** * ** * **
71266 TTTTTTTTTTGCATGGAAA-TCTTTTCTTTGC-CCTATTTTCCTTAAAATCAAAGTTCACCCCTT
64 CTTTGGTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTT-GATAAAGTCAAAGTTCATGCCTT
* ** * * ** *
71329 AAATAAGGCAAGTATCGATTCTCA-TAACAGCCTC
126 AAATAAGACAAACATGGATTCT-AGTAATAATCTT
** * * * * * ** ** * * *
71363 CATTC-TTTTAAAGATTGGGAAGC-TAAAACGCAATC-CCTTTTTAGGGGCATAGGACATTGATG
1 CATTCATTTTAGTGATTAGGCACCAT-AAACACAGTCTCCTCATTA-GGATAAATGATATTGATG
* * * * * * *
71425 CTTTAGTGTCGCAAGAAAAGCTTTCTTTCCACCATTTTTTATAGAA-TCAAAGTTTAT-CTCTTA
64 CTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGATA-AAGTCAAAGTTCATGC-CTTA
* * **
71488 AATAAGACAAAC-TCGAATACTCA-TACA-AATCCC
127 AATAAGACAAACAT-GGATTCT-AGTA-ATAATCTT
* * * * * * * * *
71521 CATTCTTTTTCA--GATTAGGCACCATAAACATAGTCTTCTTAGTAGGATACACGGTATTTGAAG
1 CATTCATTTT-AGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATA-TTGATG
* * ** * *
71584 CTTTGGTTTCGCAAGAAAGACTTTCTTCCCACCAATTTTGGTAAAGTGTAAGTTCGTGCCTCAAA
64 CTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGATAAAGTCAAAGTTCATGCCTTAAA
* *
71649 TGAGACAAACATGGATTCTAGTAATGATCTT
129 TAAGACAAACATGGATTCTAGTAATAATCTT
* ** ** * * * *
71680 CATTTATTTT-GTGATTAGGCACTGTAAGGACATTCTCCTCATTAGGAAAAATGATATTGTTGAG
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATG-C
* * * * * ** * ** * *
71744 TTT-CTTTTGCATGGAAA-TCTTTTATTTGC-CCTATTTTCCTCAAAATCAAAGTTCATCCCTTA
65 TTTGGTTTCGCA-AGAAAGGC-TTTCTTCCCACCAATTTTGAT-AAAGTCAAAGTTCATGCCTTA
* * * * *
71806 AATAAGACAAGCATCGATTCTTA-TAACAGTCTC
127 AATAAGACAAACATGGATTC-TAGTAATAATCTT
* ** * * * * * ** *
71839 CATTC-TTATAAAGATTAGGAAGC-TAAA-AC-GCACTCCTTTCTTTACGATGCATGATATCGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAG-TCTCC--TCATTAGGATAAATGATATTGAT
* * * * * * * * ** ***
71900 GCTTTTGTATCGCAAAAAAAGCATTTGTTGCCACC-GTTTCTGATAGAA-TCACAGTTTGTTTGT
63 GCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTT-TGATA-AAGTCAAAGTTCATGCCT
* * * * *
71963 TAAATAAGAGAAACATGAATACTCA-TACTAATCCT
125 TAAATAAGACAAACATGGATTCT-AGTAATAATCTT
* * * * * * * * *
71998 CATT-TTTTTCAG-GATTAGGCACTACAAATATAGTTTTCTCCTTAGGATACATGATATTGATGC
1 CATTCATTTT-AGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGC
* * * * * * * ** *
72061 TTTGGTTTTGTAAGAAAGGCTTTTTTCACA-CAACTTTTTG-TAAAGTCTATGTTCGTTTTCGTA
65 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAA--TTTTGATAAAGTCAAAGTTC-ATGCCTTA
* *** *
72124 AATGAGACAAACACAAATTCTAGTAATGATCTT
127 AATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * * *
72157 CATTTATTTT-GTAATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATTATATTGAAGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATG-C
** * ** *** * ** *
72221 TTTCTTTTC-CATGAAAATCTTT-TGT-TGTCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAA
65 TTTGGTTTCGCAAGAAAGGCTTTCT-TCCCACCAATTTT-GATAAAGTCAAAGTTCATGCCTTAA
* ** * * **
72282 ATAATACAAGGATCGATTCTTGTAAT-AGGTT
128 ATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * * * *
72313 CAATTC-TTTT-GAAGATTGGGAAGC-TAAAACACATTC-CCTTCATTCGGATACATGACATTGA
1 C-ATTCATTTTAG-TGATTAGGCACCAT-AAACACAGTCTCC-TCATTAGGATAAATGATATTGA
* * * ** * *
72374 TGCTTTGGTGTCACAGGAAAAACTTTTCTTTCCACCAATTTTTATAGAA-TCAAAGTT--TGTCT
62 TGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTGATA-AAGTCAAAGTTCATG-C-
* * * * ** *
72436 CTTGAATAAGAAAAAGATGAATAT-TCA-TTCTAATCTC
123 CTTAAATAAGACAAACATGGAT-TCT-AGTAATAATCTT
* * * * * *
72473 CATTC-TTTT-CTGGATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGATGC
1 CATTCATTTTAGT-GATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGC
* * * * * *
72536 ATTGGTCTTC-CAAGAAAAGCATTT-TTCCTAGCAATTTTTATAAAG-CTTAAGTTCATGCCTTA
65 TTTGGT-TTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTGATAAAGTC-AAAGTTCATGCCTTA
* * * * *
72598 AAAAAGATAAACATGGATTCTTGCAATGATCTT
127 AATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * *
72631 CATTCATTTT-GTGATTATGCACCATAAACACATTTTCCTTATTAGGATAAATGATATTGATGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
* ** ** ** * ** * * *
72695 TAT-TTTTCGCATCAAAATCTTTTCTTTAC-CCTATTTTCCTTAAAATCAAGGTTCATCCCTTAA
66 T-TGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTT-GATAAAGTCAAAGTTCATGCCTTAA
* * * *
72758 ATAAAACAAGCATCGATTCTCA-TAATAGTC-T
128 ATAAGACAAACATGGATTCT-AGTAATAATCTT
* *** * * * * *
72789 CTATT-TTTTTCCAGATT-GAGAACCAAAAACACA-T-TCCTTTCATTAGGTTACATGACATTGA
1 C-ATTCATTTTAGTGATTAG-GCACCATAAACACAGTCTCC--TCATTAGGATAAATGATATTGA
* * * * * * *
72850 TGCTTTGGTGTCACAAGAAAAGCTTTTTTTTCCACCATTTTTGATAGAA-TCAAAGTTTAT-CTC
62 TGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTGATA-AAGTCAAAGTTCATGC-C
* * * * **
72913 TTAAAAAAGACAAACATGAATACTTA-TACTAATCCC
124 TTAAATAAGACAAACATGGATTC-TAGTAATAATCTT
** * * * * * * * * *
72949 CATTC-TTCCAAG-GGTAAGGCACCGTAAACATAG-CATGCTCCTTAGAATACATGAAATTGATG
1 CATTCATT-TTAGTGATTAGGCACCATAAACACAGTC-TCCTCATTAGGATAAATGATATTGATG
* * *
73011 CTTTGGTTTCGCAAGAAAGG-TCTT-TTCGCACCAATTTTTG-TAAAGTCTAAGTTCAT-CTCCT
64 CTTTGGTTTCGCAAGAAAGGCT-TTCTTCCCACCAA-TTTTGATAAAGTCAAAGTTCATGC-CTT
* * *
73072 AAATGAGACAAACATGGATTCTAGTAATGATCAT
126 AAATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * * * * * *
73106 CATTCATTGT-GTAATAAGGCACTATAAACACATTCTCCTTATTAAGATAAATGATATTAAAGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATG-C
** * ** * * * ** * * *
73170 TTTCTTTTC-CATGAAATTCTTTTCTTCGC-TCTATTTTCCTTAAAGTAAAACTTCATCCCTTAA
65 TTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTT-GATAAAGTCAAAGTTCATGCCTTAA
* * * * *
73233 ATAAGATAAGCATCGATTCTTGTAATAGTC-T
128 ATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * * * *
73264 CTATT-ATTTTCA-AGATTGGGAACCAAAAACACA-TTTGCTTCATTAGGATACATGACATTGAT
1 C-ATTCATTTT-AGTGATTAGGCACCATAAACACAGTCT-CCTCATTAGGATAAATGATATTGAT
* * * * * * ** * *
73326 GCTTCGGTGAT-GCAGGAAAAGCTTTTCTTTCTACCGTTTTTGATAGAA-TCACAGTTTGTATG-
63 GCTTTGGT-TTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTGATA-AAGTCAAAG-TT-CATGC
* * * **
73388 -TTAAATAAGACAAACATGAATACTCA-TACTAATCCC
123 CTTAAATAAGACAAACATGGATTCT-AGTAATAATCTT
* * * * * * * * *
73424 CATTC-TTTTCAAT-ATTAGGCACTATAAACATAGTTTTCTCCTTAGGATACATGATATTTAGGC
1 CATTCATTTT-AGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGC
* * * * * * ***
73487 TTTGGTTTCGTAAAAAAGGCTTT-TTCACACCAATTATTG-TAAAGTCTACGTTCCTTTTTGTAA
65 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATT-TTGATAAAGTCAAAGTTCATGCCT-TAA
* * * *
73550 ATGAGAGAAACATGGATTCTAGTAATGATCAT
128 ATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * *
73582 CATTCATTTT-GTAATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATTATATTGAAGAT
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
** ** ** ** * * * ** * *
73646 TTTCTTTTTCGTGAAAATCTTTTCTTTACC-CTATTTTTCTTAAAATCAAAGTTCATCCCTTAAA
66 TTGGTTTCGCAAGAAAGGC-TTTC-TTCCCACCAATTTTGATAAAGTCAAAGTTCATGCCTTAAA
* * ** * * * *
73710 TAATACGAGGATCGATTCTTGTAATAGTCTC
129 TAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * ** *
73741 CATTC-TTTT-GAAGATTGGGAAGC-TAAA-AC-GTATTCCTTTCATTCA-GATGCATGACATTG
1 CATTCATTTTAG-TGATTAGGCACCATAAACACAGT-CTCC--TCATT-AGGATAAATGATATTG
* * * * * *
73800 ATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCCACCATTTTTTATAGAA-TCAAAGTT--TGTC
61 ATGCTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAATTTTGATA-AAGTCAAAGTTCATG-C
** * * *
73862 TCTTAAATAA-AC-ATGA-GTAGTC-A-TACTAAT-TT
123 -CTTAAATAAGACAAACATGGATTCTAGTAATAATCTT
* * * * * *
73894 CCATTC-TTTTCAG-GATTAGGCACCATAAACATAGTCTTCACATTAGGGTATACGATATTGATG
1 -CATTCATTTT-AGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATG
** * * * **
73957 CTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCAATTTTTG-TAAACCCTATGTTCGTGCCTCC
64 CTTTGGTTTCGCAAGAAAGGC-TTTCTTCCCACCAA-TTTTGATAAAGTCAAAGTTCATGCCTTA
* * *
74020 AGTGAGACAAACATGGATTC-ATGTAATGATCTT
127 AATAAGACAAACATGGATTCTA-GTAATAATCTT
* * * * * *
74053 TATTCATTTTA-TCATTATGCATCATAAACCCATTCTCCTCATTAGGATAAATGATATTGATG
1 CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATG
74115 ATTTTTTTTT
Statistics
Matches: 3379, Mismatches: 1141, Indels: 588
0.66 0.22 0.12
Matches are distributed among these distances:
152 2 0.00
153 22 0.01
154 66 0.02
155 10 0.00
156 52 0.02
157 350 0.10
158 962 0.28
159 1662 0.49
160 233 0.07
161 19 0.01
162 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (159 bp):
CATTCATTTTAGTGATTAGGCACCATAAACACAGTCTCCTCATTAGGATAAATGATATTGATGCT
TTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTGATAAAGTCAAAGTTCATGCCTTAAATA
AGACAAACATGGATTCTAGTAATAATCTT
Found at i:72751 original size:951 final size:947
Alignment explanation
Indices: 68684--79129 Score: 11038
Period size: 951 Copynumber: 11.0 Consensus size: 947
68674 AATAACAAGA
* * * * * * *
68684 ATTAGGCATCGTAAACATAGTCTTC-CTATAAAGATACAAGATATTGATGCTTTGGTTTTACTAG
1 ATTAGGCACCATAAACATAGTCTTCTC-ATTAGGATACATGATATTGATGCTTTGG-TTTCCAAG
* * ** *
68748 AAAGGCATTTTTCC-CCTAATTTTTGTAAAGCCTAAGTTCGTGCCACAAATGAGATAAACATGGA
64 AAAAGCATTTTTCCACC-AATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGA
* * * *
68812 TTCTTGTAATGAACTTCATTCATTTTGTGATTAGGCACCATAAATACATTCTCCTCATTAGGATA
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * *
68877 AATGATACTAATGATTTTTTTC-CATGGAAAACTTTTCTTTGCCTTATTTTCCTTAAAATCAATG
193 AATGATATTGATGATTTTTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAG
* * **
68941 TTCATCTCC-TAAAT-A-AC-AGTCATCGATTCTCGTAACTGTCTCCATTCTTTTCGAGATTGGG
258 TTCATC-CCTTAAATAAGACAAG-CATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGG
* * * * * * *
69002 AAAG-AAAAACAC-CTTCAATTT-ATTAGGA-GACATGAAATTGATGCTCTCGTGCCGCAAGAAA
321 -AAGCTAAAACGCAC-TC-CTTTCATTAGGATG-CATGACATTGATGCTTTGGTGTCGCAAGAAA
* * * * **
69063 AGCTTTTTTTTTTCACCATTTTTGATAGAATCAAGGTTTGTCTCTTAAGTGTGACAAACATGAAT
382 AGC-TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* * *
69128 ACTTATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCGTCACATTAGGATAC
446 ACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAC
* * *
69193 ACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCTATTTTTGTAAAGCCTATGT
511 ACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGT
* * * * *
69258 TCATGCCTCAAATGAGACAAACATAGATTC-ATGTAATGATCTTTATTCATTTTGTCATTATGCA
576 TCGTGCCTCAAATGAGACAAACATGGATTCTA-GTAATGATCTTCATTCATTTTGTGATTAGGCA
* * **
69322 CCATAAACCCGCTCTCCTCATTAGGATAAATGATATT-AATGATTTTCTTTTGCATGAAAATCTT
640 CTATAAACACATTCTCCTCATTAGGATAAATGATATTGAA-GATTTTCTTTTGCATGAAAATCTT
* * * * * * **
69386 TTCTTTACTCTATTTTCCTTGAAATGAAAGTTCATCCATTAAATATGATAAGTATCGATTCTAAT
704 TT-TTTGCCCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGACAAGTATCGATTCTCGT
* * * * * * *
69451 AACAATATCTATTCTTTTCG-ATATTGGGAACCAAAAATACCTTCACTTTATTAGGAGACATGAC
767 AACAGTCTCTATTCTTTT-GAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGAC
* * * *
69515 ACTGATGCTTTGATGTCACAAGAAAAGCTTTT-TTTCCCACCGTTTTTGATAGAATCAAGGTTTG
831 ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT-CCACCGTTTTTGATAGAATCAAAGTTTG
* * * * *
69579 TCTCTTAAGTAAAACAAACATAAATACTCATACTAATCCCTATTCCTTTCAGG
895 TCTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
* * * * * *
69632 ATTAGGGATCGTAAACATAGTCTTCTCATTAGGATCCATGATATTGGTGCTTTGGTTTTGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGG-TTTCCAAGA
* * * * * * *
69697 AAAGC-TTTTCTCACACCAATTTTTGTAGAGTCTAAGTTTGTGCCTCAAAAGAGATAAGCATGAA
65 AAAGCATTTT-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGA
* * * * * *
69761 TTCTAGTAACGATCTTCATTCATTCTGCGATTAGGCACTATAAACACATTTTTCTCATTAGGATT
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * *
69826 AATGCTATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTATCCTATTTTCCTCAAAATCAAA
193 AATGATATTGATGATTTT-TTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAA
** * * * * * ** * *
69891 GTTCATCTTTTAAATAGGATAGGCATCAATTCTCATAACACTCTCCATTCTTTTTTACATTGGTA
257 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGA
* * *
69956 ACCAAAAAC-AACTTCAC-TTCATTAGGA-GACATGACATTGATGCTTTGGTGTCGCAAGAAAAG
322 AGCTAAAACGCAC-TC-CTTTCATTAGGATG-CATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * ** *
70018 CTTTTCTTTCTACAATTTTTTATAGAATCAAATTTTATCTCTTCCATAAGACAAACTTGAATACT
384 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* *
70083 CATACTAATCCCCATTCTTTTCCA-GATTAGGCACCATAAACATAGTCTTCTCATTAGGATTCAT
449 CATACTAATCCCCATTCTTTT-CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACAC
* * * ** * * **
70147 GGTATTAATGCCTTGGTTTAACAAGAAAGGCCTTCTTCCCACCAATTTCGGTAAAGTCTAAGTTC
513 GATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTC
* *
70212 GTGCCTCAAATGAGACAAACTTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCA
578 GTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTA
* * * * *
70277 TAAACACACTCTCCTTATTAGGAAAAATGATATTGATGATTTT-TTTTGTATGAAAATCTTTTCT
643 TAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATCTTTT-T
* * *
70341 TTACCCTATTTTCCTTAAAATCAAAGTTCACCCTTTAAATAAGATAAGTATTC-ATTCTCGTAAC
707 TTGCCCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGACAAGTA-TCGATTCTCGTAAC
** * * * * * * * *
70405 AACCTCTATTTTTTTAAATATTGGGAAGCTAAAACGCAATCCCTT-ATTGAGGATACATGACATT
770 AGTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATT-AGGATACATGACATT
* * * ** * * * * *
70469 GATGCTTAGGTGTCGCAAGAAAATG-TCTTATTTCCACTATTTTCGATAGAATTAAGGTTTATTT
834 GATGCTTTGGTGTCGCAAGAAAA-GCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCT
* * * * *
70533 GTTAAATAAGATAAACTTGAATACTCATACTAATCCTCATTCTTTTTC-GT
898 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC-TTTTCAGG
* * * *
70583 ATTGGGCACCATAATCATAGTCTTCT-ATTATGATACATAATATTGATGCTTTGGTTTCGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC-CAAGA
* * * *
70647 AAGGC-TTTCTTCCCACCAATTTTGGTAAAGTTTAAGTTCATGCCTTAAATGAGACAAACATGGA
65 AAAGCATTT-TT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGA
* * * * *
70711 TTCTAGTAATAATCTTCATTCATTTTGTGATTAGGCACCATGAACACACTCTCCTCATTAGGACA
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * *
70776 AATGATATTGATAAATTTTTTCTGCATGGAAATCTTTTC-TTAGCCTTGTTTTGCATAAAATCAA
193 AATGATATTGATGATTTTTTTC-GCATGGAAATCTTTTCTTTA-CCCTATTTTCCTTAAAATCAA
* * * * *
70840 AGTTCATCCCTTAAATAAGACAAGTATTGATTCTCGTAACAGCCTCCATTCTTTTAAAGATTAGG
256 AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGG
* * * * *
70905 AAGCTAAAACGCAATCCCTTC-TTAAGGATACATGACATTGATGCTTTAGTGTCAG-AAGAAAAA
321 AAGCTAAAACGCACTCCTTTCATT-AGGATGCATGACATTGATGCTTTGGTGTC-GCAAGAAAAG
* *
70968 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCTTAAATAAGACAAACTTGAATACT
384 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * *
71033 CATACTAATCCCCATTCTTTTCCA-AATTAGGCACCATAAACATAGTCTTCTCGTTAGGAAATAC
449 CATACTAATCCCCATTCTTTT-CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACAC
** * * *
71097 GGCATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCCACCCATTTTGGTAAAGTCTAAGTT
513 GATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCAATTTTTGTAAAGTCTAAGTT
* *
71161 TGTGCCTCAAATAAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACT
577 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACT
* * * * * * * *
71226 GTAAGCACGTTCTTCTCATTAGGAAAAATGCTATT-AATGATTTTTTTTTTGCATGGAAATCTTT
642 ATAAACACATTCTCCTCATTAGGATAAATGATATTGAA-GA-TTTTCTTTTGCATGAAAATCTTT
* * *
71290 TCTTTGCCCTATTTTCCTTAAAATCAAAGTTCACCCCTTAAATAAGGCAAGTATCGATTCTCATA
705 T-TTTGCCCTATTTTCCTTAAAATCAAAGTTCA-TCCTTAAATAAGACAAGTATCGATTCTCGTA
* * * * * * * * * **
71355 ACAGCCTCCATTCTTTTAAAGATTGGGAAGCTAAAACGCAATCCCTT-TTTAGG-GGCATAGGAC
768 ACAGTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACAT--GAC
* * * *
71418 ATTGATGCTTTAGTGTCGCAAGAAAAGC-TTTCTTTCCACCATTTTTTATAGAATCAAAGTTTAT
831 ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
*
71482 CTCTTAAATAAGACAAAC-TCGAATACTCATACAAATCCCCATTCTTTTTCA-G
896 CTCTTAAATAAGACAAACAT-GAATACTCATACTAATCCCCATTC-TTTTCAGG
* * * * *
71534 ATTAGGCACCATAAACATAGTCTTCTTAGTAGGATACACGGTATTTGAAGCTTTGGTTTCGCAAG
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATA-TTGATGCTTTGGTTTC-CAAG
* * *
71599 -AAAG-ACTTTCTTCCCACCAATTTTGGTAAAGTGTAAGTTCGTGCCTCAAATGAGACAAACATG
64 AAAAGCA-TTT-TT-CCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATG
* * **
71662 GATTCTAGTAATGATCTTCATTTATTTTGTGATTAGGCACTGTAAGGACATTCTCCTCATTAGGA
126 GATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGA
* * * * *
71727 AAAATGATATTGTTGAGTTTCTTTT-GCATGGAAATCTTTTATTTGCCCTATTTTCCTCAAAATC
191 TAAATGATATTGATGA-TTT-TTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * *
71791 AAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTTATAACAGTCTCCATTCTTATAAAGATTA
254 AAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTG
* * * * * * *
71856 GGAAGCTAAAACGCACTCCTTTCTTTACGATGCATGATATCGATGCTTTTGTATCGCAAAAAAAG
319 GGAAGCTAAAACGCACTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAAAG
* * * * * * * * *
71921 CATTTGTTGCCACCGTTTCTGATAGAATCACAGTTTGTTTGTTAAATAAGAGAAACATGAATACT
384 CTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACT
* * * * * * * *
71986 CATACTAATCCTCATTTTTTTCAGGATTAGGCACTACAAATATAGTTTTCTCCTTAGGATACATG
449 CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACG
* * * * *
72051 ATATTGATGCTTTGGTTTTGTAAGAAAGGCTTTTTTCACA-CAACTTTTTGTAAAGTCTATGTTC
514 ATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTC
** *** * *
72115 GT-TTTCGTAAATGAGACAAACACAAATTCTAGTAATGATCTTCATTTATTTTGTAATTAGGCAC
578 GTGCCTC--AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCAC
* *
72179 TATAAACACATTCTCCTCATTAGGATAAATTATATTGAAGATTTTCTTTTCCATGAAAATCTTTT
641 TATAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATCTTTT
* * * * * *
72244 GTTGTCCTATTTTCCTTAAAATCAAAGTTCATCCTTAAATAATACAAGGATCGATTCTTGTAATA
706 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCTTAAATAAGACAAGTATCGATTCTCGTAACA
* * * * *
72309 GGT-TCAATTCTTTTGAAGATTGGGAAGCTAAAACACATTCCCTTCATTCGGATACATGACATTG
771 -GTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGACATTG
* * * *
72373 ATGCTTTGGTGTCACAGGAAAAACTTTTCTTTCCACCAATTTTT-ATAGAATCAAAGTTTGTCTC
835 ATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACC-GTTTTTGATAGAATCAAAGTTTGTCTC
* * * * * * *
72437 TTGAATAAGAAAAAGATGAATATTCATTCTAATCTCCATTCTTTTCTGG
899 TTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
* * *
72486 ATTAGGCACCATAAACATAGTCTTCTCATAAGGATACACGATATTGATGCATTGGTCTTCCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGT-TTCCAAGA
* * * ** *
72551 AAAGCATTTTTCCTAGCAATTTTTATAAAG-CTTAAGTTCATGCCTTAAAAAAGATAAACATGGA
65 AAAGCATTTTTCC-ACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTTAAATGAGACAAACATGGA
* * * * * *
72615 TTCTTGCAATGATCTTCATTCATTTTGTGATTATGCACCATAAACACATTTTCCTTATTAGGATA
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
** *
72680 AATGATATTGATGATTATTTTTCGCATCAAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAG
193 AATGATATTGATGATT-TTTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAA
* * * * ** *
72745 GTTCATCCCTTAAATAAAACAAGCATCGATTCTCATAATAGTCTCTATTTTTTTCCAGATTGAGA
257 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGA
* * * * * * *
72810 ACCAAAAACACATTCCTTTCATTAGGTTACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTT
322 AGCTAAAACGCACTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTT
* * * *
72875 TTTTTTCCACCATTTTTGATAGAATCAAAGTTTATCTCTTAAAAAAGACAAACATGAATACTTAT
387 TTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCAT
* * * * * * * *
72940 ACTAATCCCCATTC-TTCCAAGGGTAAGGCACCGTAAACATAG-CATGCTCCTTAGAATACATGA
452 ACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTC-TTCTCATTAGGATACACGA
* * *
73003 AATTGATGCTTTGGTTTCGCAAGAAAGG--TCTTTTCGCACCAATTTTTGTAAAGTCTAAGTTCA
515 TATTGATGCTTTGGTTTCGCAAGAAAGGCAT-TTTTCCCACCAATTTTTGTAAAGTCTAAGTTCG
* * * * *
73066 TCTCCT-AAATGAGACAAACATGGATTCTAGTAATGATCATCATTCATTGTGTAATAAGGCACTA
579 T-GCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTA
* * * * *
73130 TAAACACATTCTCCTTATTAAGATAAATGATATTAAAGATTTTCTTTTCCATGAAATTCTTTTCT
643 TAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATCTTTT-T
* * * * * * * * *
73195 TCGCTCTATTTTCCTTAAAGTAAAACTTCATCCCTTAAATAAGATAAGCATCGATTCTTGTAATA
707 TTGCCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGACAAGTATCGATTCTCGTAACA
* * **
73260 GTCTCTATTATTTTCAAGATTGGGAACCAAAAACACATTTGCTTCATTAGGATACATGACATTGA
771 GTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGACATTGA
* * * * * *
73325 TGCTTCGGTGAT-GCAGGAAAAGCTTTTCTTTCTACCGTTTTTGATAGAATCACAGTTTGTATGT
836 TGCTTTGGTG-TCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCT
**
73389 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAAT
900 TAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
* * * * * *
73437 ATTAGGCACTATAAACATAGTTTTCTCCTTAGGATACATGATATTTAGGCTTTGGTTTCGTAA-A
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC-CAAGA
* * * *** *
73501 AAAGGC-TTTTTCACACCAATTATTGTAAAGTCTACGTTCCTTTTTGTAAATGAGAGAAACATGG
65 AAA-GCATTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCT-TAAATGAGACAAACATGG
* *
73565 ATTCTAGTAATGATCATCATTCATTTTGTAATTAGGCACTATAAACACATTCTCCTCATTAGGAT
127 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * ** * * *
73630 AAATTATATTGAAGATTTTCTTTTTCGTGAAAATCTTTTCTTTACCCTATTTTTCTTAAAATCAA
192 AAATGATATTGATGATTTT-TTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * ** * *
73695 AGTTCATCCCTTAAATAATACGAGGATCGATTCTTGTAATAGTCTCCATTCTTTTGAAGATTGGG
256 AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGG
* * *
73760 AAGCTAAAACGTATTCCTTTCATTCA-GATGCATGACATTGATGCTTTGGTGTCGCAAAAAAAGC
321 AAGCTAAAACGCACTCCTTTCATT-AGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAAAGC
* * *
73824 TTTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAAT-----AAACATGAGTAGTC
385 TTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTC
** * * *
73884 ATACTAATTTCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCACATTAGGGTATACGA
450 ATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGA
** *
73949 TATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAACCCTATGTTCGT
515 TATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGT
* * * * * *
74014 GCCTCCAGTGAGACAAACATGGATTC-ATGTAATGATCTTTATTCATTTTATCATTATGCA-TCA
580 GCCTCAAATGAGACAAACATGGATTCTA-GTAATGATCTTCATTCATTTTGTGATTAGGCACT-A
* * * * * *
74077 TAAACCCATTCTCCTCATTAGGATAAATGATATTGATGATTTTTTTTTGTATGGAAATATTTTCT
643 TAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATCTTTT-T
* ** * * * *
74142 TTGCCCTATTTTCCTTGAAAGGAAAGTTCATCTATTAAATAAGACAAGCATCGATTCTCATAATA
707 TTGCCCTATTTTCCTTAAAATCAAAGTTCATC-CTTAAATAAGACAAGTATCGATTCTCGTAACA
* * *
74207 GTCTCTATTCTTTTCG-AGATTGGGAACCAAAAATACCTTCACTTTATTAGG----A-GACA-TG
771 GTCTCTATTCTTTT-GAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGACATTG
* * * *
74265 A--C----AT-T-----GAAAAGCTTGTT-TTTCCACCATTTTTGAAAGAATCAAGGTTTGTCTC
835 ATGCTTTGGTGTCGCAAGAAAAGCTT-TTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTC
* *
74317 -TAAAGTAAGACAAACATGAATACTCATACTAATTCCTATTCCTTTT-AGG
899 TTAAA-TAAGACAAACATGAATACTCATACTAATCCCCATT-CTTTTCAGG
* * * *
74366 ATTAGGCACCGTAAACATAGTCTTCTCATTAGGATCCATGATATTGGTGCTTTGGTTTTGCAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGG-TTTCCAAGA
* * *
74431 AAAGC-TTTTCTCACACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAAAGAGACAAACATGAA
65 AAAGCATTTT-TC-CACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGA
*
74495 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTTTCCTCATTAGGATA
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* *
74560 AATGTTATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTATCCC-ATTTTCCTTAAAAATCA
193 AATGATATTGATGATTTT-TTTCGCATGGAAATCTTTTCTTTA-CCCTATTTTCCTT-AAAATCA
* * * * **
74624 AAGTTCATCCCTTAAATAAGACATGCAACAATTCT-AGTAACAATCTCCATTCTTTTTGAGATTG
255 AAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCA-TAACAGTCTCCATTCTTTTAAAGATTG
* * ** * *
74688 GTAA-CCAAAA-GCAACTTCAATTCATTAGGAGGCA-G-CATTGATGCTTTGCTGTCGCAAGAAA
319 GGAAGCTAAAACGC-AC-TCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAA
* * * * * *** *
74749 AGCTTTTCTTTCCACCGTTTTTGTTAGAATTAAATTTTATCTCTTCCGTAAGACAAACTTGAATA
382 AGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATA
* * * ** *
74814 CTTATACTAATCCCCATTCTTTTCTA-GATAAGACACTGTAAACAGAGTCTTCTCATTAGGATAC
447 CTCATACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAC
* * * * * * * *
74878 ACGGTATTGATGCCTTAGTTTCACAAGAAAGGCCTTCTTCCCACCAATTTTGGTAAAATCTAAGT
511 ACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGT
* *
74943 TCGTGCCTCAAATGAGACAAACTTGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGGCAC
576 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCAC
* * * *
75008 CATAAACACATTGTCCTCATTAGGAAAAATGATATT-AATGATTTTTTTTTTGCATGAAAATCTT
641 TATAAACACATTCTCCTCATTAGGATAAATGATATTGAA-GA-TTTTCTTTTGCATGAAAATCTT
* *
75072 TTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCACCCTTTAAATAAGATAAGTATCGATTCTCGT
704 TT-TTTGCCCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGACAAGTATCGATTCTCGT
* * * * ** ** * * * *
75137 TACAGTCTCCATTATTTTAAAGATTGGGATGCTTAAACGCAATCCCTT-ATTGAGTATACATGAC
767 AACAGTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATT-AGGATACATGAC
* * * * * *
75201 ATTGATGCTTTGGTGTCGCAAGAAAAGTTTTTCTTTCTACCGTGTTCGATAGAATCAAGGTTTAT
831 ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * * * *
75266 TTTTTAAATAAGATAAACTTGAATACTTATACTAATCCCCATTCTTTTTC-GA
896 CTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTC-TTTTCAGG
* * * * * *
75318 ATTGGGCACCATAATCATAGTTTTCTCATTACGATATAGGATATTGATGCTTTGGTTTCGCAAG-
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC-CAAGA
* * * *** * *
75382 AAAG-ACTTTCTTCCCCCTAATGTTGGTAAAGTCTAAGTTCACACCTTAAAGGAGACAAAGATGG
65 AAAGCA-TTT-TTCCACC-AATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGG
* ** * * *
75446 ATTATAGTAACAATCTTCACTC-TTTCTGTGATTAGGCACCATAAACGCACTT-TCCTCATTAGG
127 ATTCTAGTAATGATCTTCATTCATTT-TGTGATTAGGCACTATAAACACA-TTCTCCTCATTAGG
* * * *
75509 AAAAATGATATTGATGATTTTTTTTTTGCATGGAAATCTTTT-ATTAGCCCTACTTTCCTTAAAA
190 ATAAATGATATTGATGA--TTTTTTTCGCATGGAAATCTTTTCTTTA-CCCTATTTTCCTTAAAA
* * * * *
75573 TCAAAGTTCATCCCTTAAATAAGACAAGTATTGATTCTCGTAACAGCCTCCATTTTTTTAAAGAT
252 TCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGAT
* * * * * *
75638 TAGGAAGCTAAAGCGCAATCTTTTC-TTGAGGATACATGACATTGATGCTTTGGTGTCACAAGAA
317 TGGGAAGCTAAAACGCACTCCTTTCATT-AGGATGCATGACATTGATGCTTTGGTGTCGCAAGAA
* * * *
75702 AAACTTTT-TTT-CACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATTAGACAAACTTGAAT
381 AAGCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAAT
* * *
75765 ACTTATACTAATCCCCATTTTTTTTC-GGATTAAGCACCATAAACATAGTCTTCTCATTA-GATA
446 ACTCATACTAATCCCCA-TTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATA
* * * * * * *
75828 TACGGTATTAATGCTTTGGTTTTGCAAGAAAGG-TTTTCTTCCAACCAATTTTGGTAAAGTCTAA
510 CACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCAATTTTTGTAAAGTCTAA
* *
75892 GTTCGTGCCTCAAATGAAACAAACATGGATTCTAGTAATAATCTTCATTCATTTTGTGATTAGGC
574 GTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGC
* * * *
75957 ACTATAAACACACTCTCCTCATTCGGAAAAATGATATT-AATGATTTT-TTTTGCATGGAAATCT
639 ACTATAAACACATTCTCCTCATTAGGATAAATGATATTGAA-GATTTTCTTTTGCATGAAAATCT
* * *
76020 TTTGTTAGCCTTATTTTCCTTAAAATCAAAATTCATCCCTTAAATAAGACAAGTATCGATTCTCG
703 TTT-TTTGCCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGACAAGTATCGATTCTCG
** * *
76085 TAACAACCTCCATTCTTTTCAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGAC
766 TAACAGTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGAC
* * *
76150 ATTGGTGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCACAGTTTGT
831 ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGT
* * * *
76215 CTGTTAAATAAGACAAACATGAGTACTTATACTAATCCCTATTCTTTTCAGG
896 CTCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
* * * * *
76267 ATTAGGCACTATAAGCATAGTTTTCTCCTTAGGATACAAGATATTGATGCTTTGGTTT-CATGAG
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCCA--AG
* * * * ** *
76331 AAAGGCTTTTTTCACACCAATTTTTGTAAAGTTTGAGTTCGTTTTCGTAAATGAGACAAACATGG
64 AAAAGCATTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCG-TGCCTTAAATGAGACAAACATGG
* * * *
76396 ATTCTAGAAATGATCTTCATTCATTTTGTCATTAGGCACTATAAATACATTCTCCTCATTACGAT
127 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * *
76461 AAATTATATTGAAGATTTTTTTC-CATGGAAATC-TTTCTTTACCCTATTTTCCTTAAAGTCAGA
192 AAATGATATTGATGATTTTTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAA
* * * * *
76524 GTTTATCCCTTAAATAATATGAAG-ATCGATTCTTATAACAGTCTCCATTCTTTTGAAGATTGGG
257 GTTCATCCCTTAAATAAGA-CAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGG
* ** * * * * * *
76588 AAGCTAAAACCCTTTCCCTTCATTCGGATACATGATATTGATGCTTTGGTGTTGCAAAAAAAGCT
321 AAGCTAAAACGCACTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
* * * **
76653 TTTCTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAAATAAGAAAAACATGAGTGGTCA
386 TTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCA
** * * * *
76718 TACTAATTTCCATTCTTTTCTA-GATTAGGGAACATAAACATAGTGTTCTCATAAGGATACTTA-
451 TACTAATCCCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAC--AC
* * *
76781 G-CATTGATGCTTTGGGTTTC-CAAGGAAGGCATTTTTCCCACCAATTTTTGTACAG-CTTAAGT
513 GATATTGATGCTTT-GGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTC-TAAGT
* * * *
76843 TCTTGCCTCAAAAGAGACAAACATGGATTCTTGTAATGATCTTCATTCATTTTGTGATTACGCAC
576 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCAC
* * *
76908 CAT-AACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATTG-AAATTTTT
641 TATAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCA-TGAAAATCTTT
* * *
76971 TCTTTGCCCCATTTTCCTTAAAATCAAAGCTCATCCCTTAAATAAAACAAGTATCGATTCTCGTA
705 T-TTTGCCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGACAAGTATCGATTCTCGTA
* * *
77036 ATAGTCTCTATTCTTTTCG-AGATTGGGAACCAAAAACACATTCCCTTCACTAGGATACATGACA
768 ACAGTCTCTATTCTTTT-GAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGACA
*
77100 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTTTTTCCACCGTTTTTGATAGAATCAAAGTTTGTC
832 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTC
* *
77165 TCTTAAATAAGACAAACATGGATACTCATACTAATCCCCATTGTTTTCAGG
897 TCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
* * * *
77216 ATTAGGCACCGTAAACATAGTCTGCTCTTTAGGATACATGATATTGATGCTTTGGTTTTACAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGG-TTTCCAAGA
* * ** **
77281 CAGGTTTTTTTCGCAGTAATTTTTGTAAAGTCTAAGTTCGTGTCC-TAAATGAGACAAACATGGA
65 AAAGCATTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTG-CCTTAAATGAGACAAACATGGA
* **
77345 TTCTAGTAATGATCTTCATTCATTTTGTAATTAGGCACTATAAACACATTCTCCTTGTTAGGATA
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * * * * *
77410 AATGATATTAAAGATTTCCTTTT-GCATGGAAAGCTTTTCTTTGCCCTATTTTCCTTAAAGTAAA
193 AATGATATTGATGATTT--TTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * ** * * * *
77474 AGTTCATCCCTTAATTAAGATAAGCATCGATTTTTGTAATAATCTCTATTCTTTTTAAGATTGGG
256 AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGG
* * *
77539 AA-CTAAAAC-CACATTTGCTTT-ATTAGGATACATGACATTGATGCTTTGGTGTCGGAAGAAAA
321 AAGCTAAAACGCAC---TCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAAA
* ** *
77601 GCTTTTCTTTCCACCCTTTTAAATAGAATCAAAGTTTATCTCTTAAATAAGA-AAAGCATGAATA
383 GCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAA-CATGAATA
* * * * *
77665 GTCATACTAATCTCCATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTCACATAAGGATACA
447 CTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACA
* * * *
77730 CGATATTGATGCTTTGGTTTTGTAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTT
512 CGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTT
* * * * *
77795 TGTGTCTCAAATGAGACAAACATGGACTCTTGTAATGATCTTCATTCATTTTGTGATTAGGCACC
577 CGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACT
* * * * * *
77860 ATAAACACATTCTCCTAATTAGGGTAACTGATATTGATGATTTTCTTTT-CAAGGAAATCTTTTC
642 ATAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATCTTTT-
* * *
77924 TTTGCCCTACTTTCCTTAAAATCAAAGTTCATCCTTTAAATAAGACAAGCATCGATTCTCATAAC
706 TTTGCCCTATTTTCCTTAAAATCAAAGTTCATCC-TTAAATAAGACAAGTATCGATTCTCGTAA-
**** * * * *
77989 CAAAAAC-ATTCTTTTCAAGATTGGGAACCAAAATCACCTTCACTTCATTAGGAGACATGACATT
769 CAGTCTCTATTCTTTTGAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGACATT
* *
78053 AATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTGTTT-ATAGAATCAAGGTTTGTCT
834 GATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTT-TTTGATAGAATCAAAGTTTGTCT
* * * *
78117 CTTAAGTAAGTCAAACATGGATACTCATACTAATCCCCATTCTTTTCAAG
898 CTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCAGG
* * * * * *
78167 ATTAGGCACCGTTAACATAGTCTTCACATTAGGATACACGATCTTGATGCTTTGGTTTCGTAAGA
1 ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTC-CAAGA
* * * *
78232 AAGGCATTTTTCCCACCAATTTTTGTAAAG-CATAAGTTCGTGCCTCAAATGAGACAAACTTAGA
65 AAAGCATTTTT-CCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTTAAATGAGACAAACATGGA
* * * ** * * *
78296 TTTTTGTAATGATCTTCATTCAATTTGTGATTACTCACCATAAACACATTCTTCTTATTAGGATA
128 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
* * **
78361 AAAGATATTGATGACTTTCTTTTC-CATGGAAATCTTTTCTTTGCCCTATTTTCCTTGGAATCAA
193 AATGATATTGATGA-TTT-TTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* ** * * * **
78425 AGGTCATCCCACAAATAAGACAAGCACCGATTCTCATAATAGTCTCCATTGTTTTCGAGATTGGG
256 AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGG
* * * * * *
78490 TACCAAAAACTC-CTTCAC-TTCATTAAGA-GACATGGCATTGATGCTTTGGTGTCGCAAGAAAA
321 AAGCTAAAACGCAC-TC-CTTTCATTAGGATG-CATGACATTGATGCTTTGGTGTCGCAAGAAAA
* * * * *
78552 GCTTTTCCTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAACACGAATG
383 GCTTTTCTTTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAA-ATAAGACAAACATGAATA
* * *
78616 CTCATACTAATCTCTATTCTTTTCAGGATTACGCACCATAAACATAGTCTTCTCATTAGGA-ACC
447 CTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATA-C
* * * * *
78680 ATGGTATTGATGCTTTCGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGT
511 ACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGT
* * *
78744 TTGTGCCTCAAATGAGACAAACCTGGATTCTAGTAATGATCTTCATTCATCTTGTGATTAGGCAC
576 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCAC
* * * * * * *
78809 TATAAACACATTCTCCCCTTTAGGATAAAGGATATTGATGATTTTCTCTTGTATGGAAATCATTT
641 TATAAACACATTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATC-TTT
* * * * * *
78874 CTTTGTCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCCCATAA
705 TTTTGCCCTATTTTCCTTAAAATCAAAGTTCAT-CCTTAAATAAGACAAGTATCGATTCTCGTAA
* * * * * * *
78939 CCGTCTCCATTCTTTTTG-AGATTAGGTACCAGAAACA-ACTTCACTTTATTAGGAGACATGACA
769 CAGTCTCTATTC-TTTTGAAGATTGGGAACCAAAAACACA-TTCACTTCATTAGGATACATGACA
* * *
79002 TTGATGCTTTGGGGTTGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTATC
832 TTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTC
* * * * *
79067 TCTTTAATAAGACAAACTTGAATACTTATACTAATACCCATTCTTTTCCA-A
897 TCTTAAATAAGACAAACATGAATACTCATACTAATCCCCATTCTTTT-CAGG
79118 ATTAGGCACCAT
1 ATTAGGCACCAT
79130 GTCAGCTCTA
Statistics
Matches: 7998, Mismatches: 1262, Indels: 473
0.82 0.13 0.05
Matches are distributed among these distances:
928 69 0.01
929 256 0.03
930 121 0.02
932 1 0.00
933 206 0.03
934 112 0.01
935 1 0.00
938 1 0.00
939 5 0.00
940 3 0.00
941 3 0.00
942 5 0.00
943 1 0.00
946 216 0.03
947 262 0.03
948 289 0.04
949 955 0.12
950 947 0.12
951 2752 0.34
952 1050 0.13
953 610 0.08
954 127 0.02
955 6 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.37
Consensus pattern (947 bp):
ATTAGGCACCATAAACATAGTCTTCTCATTAGGATACATGATATTGATGCTTTGGTTTCCAAGAA
AAGCATTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC
TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAAT
GATATTGATGATTTTTTTCGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAGTTC
ATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAGCT
AAAACGCACTCCTTTCATTAGGATGCATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCT
TTCCACCATTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACAAACATGAATACTCATACTA
ATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGA
TGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCA
AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
TTCTCCTCATTAGGATAAATGATATTGAAGATTTTCTTTTGCATGAAAATCTTTTTTTGCCCTAT
TTTCCTTAAAATCAAAGTTCATCCTTAAATAAGACAAGTATCGATTCTCGTAACAGTCTCTATTC
TTTTGAAGATTGGGAACCAAAAACACATTCACTTCATTAGGATACATGACATTGATGCTTTGGTG
TCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAAGTTTGTCTCTTAAATAAGACA
AACATGAATACTCATACTAATCCCCATTCTTTTCAGG
Found at i:80001 original size:19 final size:20
Alignment explanation
Indices: 79956--80008 Score: 72
Period size: 19 Copynumber: 2.7 Consensus size: 20
79946 CTGCCAGTTT
* *
79956 CATGTATCGATACAATTGAG
1 CATGTATCGATACAATCGAA
*
79976 TATGTATCGATACAA-CGAA
1 CATGTATCGATACAATCGAA
79995 CATGTATCGATACA
1 CATGTATCGATACA
80009 TTGTATCGAT
Statistics
Matches: 29, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
19 15 0.52
20 14 0.48
ACGTcount: A:0.38, C:0.17, G:0.17, T:0.28
Consensus pattern (20 bp):
CATGTATCGATACAATCGAA
Found at i:80015 original size:13 final size:13
Alignment explanation
Indices: 79997--80021 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
79987 ACAACGAACA
79997 TGTATCGATACAT
1 TGTATCGATACAT
80010 TGTATCGATACA
1 TGTATCGATACA
80022 AAGCATAATG
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.32, C:0.16, G:0.16, T:0.36
Consensus pattern (13 bp):
TGTATCGATACAT
Found at i:80019 original size:32 final size:33
Alignment explanation
Indices: 79978--80042 Score: 98
Period size: 33 Copynumber: 2.0 Consensus size: 33
79968 CAATTGAGTA
*
79978 TGTATCGATACAACG-A-ACATGTATCGATACAT
1 TGTATCGATACAAAGCATA-ATGTATCGATACAT
80010 TGTATCGATACAAAGCATAATGTATCGATACAT
1 TGTATCGATACAAAGCATAATGTATCGATACAT
80043 CTGGATATGT
Statistics
Matches: 30, Mismatches: 1, Indels: 3
0.88 0.03 0.09
Matches are distributed among these distances:
32 14 0.47
33 15 0.50
34 1 0.03
ACGTcount: A:0.38, C:0.17, G:0.15, T:0.29
Consensus pattern (33 bp):
TGTATCGATACAAAGCATAATGTATCGATACAT
Found at i:82500 original size:30 final size:29
Alignment explanation
Indices: 82464--82555 Score: 85
Period size: 30 Copynumber: 3.4 Consensus size: 29
82454 TTCTTCACTA
82464 TATCGATACATTCTAGGTTTTACCCAGATG
1 TATCGATACATTCTAGGTTTTACCCA-ATG
* *
82494 TATCGATACA-T-TA----TT---CATTC
1 TATCGATACATTCTAGGTTTTACCCAATG
82514 TATCGATACATTCTAGGTTTTACCCATATG
1 TATCGATACATTCTAGGTTTTACCCA-ATG
82544 TATCGATACATT
1 TATCGATACATT
82556 TCTCAACGTA
Statistics
Matches: 48, Mismatches: 4, Indels: 20
0.67 0.06 0.28
Matches are distributed among these distances:
20 11 0.23
21 3 0.06
22 2 0.04
24 2 0.04
26 2 0.04
28 2 0.04
29 3 0.06
30 23 0.48
ACGTcount: A:0.28, C:0.20, G:0.12, T:0.40
Consensus pattern (29 bp):
TATCGATACATTCTAGGTTTTACCCAATG
Found at i:82518 original size:50 final size:48
Alignment explanation
Indices: 82442--82576 Score: 189
Period size: 50 Copynumber: 2.7 Consensus size: 48
82432 TTTCATAATT
*
82442 TGTATCGATACATTCTTCACTATATCGATACATTCTAGGTTTTACCCAGA
1 TGTATCGATACATT-TTCA-TCTATCGATACATTCTAGGTTTTACCCAGA
*
82492 TGTATCGATACATTATTCATTCTATCGATACATTCTAGGTTTTACCCATA
1 TGTATCGATACATT-TTCA-TCTATCGATACATTCTAGGTTTTACCCAGA
*
82542 TGTATCGATACATTTCTCAACGTATCGATACATTC
1 TGTATCGATACATTT-TCATC-TATCGATACATTC
82577 AGGCATTTTT
Statistics
Matches: 78, Mismatches: 5, Indels: 4
0.90 0.06 0.05
Matches are distributed among these distances:
49 2 0.03
50 76 0.97
ACGTcount: A:0.28, C:0.21, G:0.11, T:0.39
Consensus pattern (48 bp):
TGTATCGATACATTTTCATCTATCGATACATTCTAGGTTTTACCCAGA
Found at i:85078 original size:19 final size:20
Alignment explanation
Indices: 85029--85080 Score: 70
Period size: 20 Copynumber: 2.6 Consensus size: 20
85019 TTACAAGCCA
*
85029 ATGTATCGATACATTTTGGG
1 ATGTATCGATACATCTTGGG
* *
85049 ATGTATTGATACATCTTGTG
1 ATGTATCGATACATCTTGGG
85069 -TGTATCGATACA
1 ATGTATCGATACA
85081 AACAGTTAAG
Statistics
Matches: 28, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
19 11 0.39
20 17 0.61
ACGTcount: A:0.27, C:0.12, G:0.21, T:0.40
Consensus pattern (20 bp):
ATGTATCGATACATCTTGGG
Found at i:85180 original size:13 final size:13
Alignment explanation
Indices: 85162--85186 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
85152 ACATTTGGTC
85162 ATGTATCGATACA
1 ATGTATCGATACA
85175 ATGTATCGATAC
1 ATGTATCGATAC
85187 TGTGCAATCT
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.36, C:0.16, G:0.16, T:0.32
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:87635 original size:13 final size:13
Alignment explanation
Indices: 87617--87652 Score: 54
Period size: 13 Copynumber: 2.8 Consensus size: 13
87607 AAACCCTTTG
*
87617 TATCGATACACTA
1 TATCGATACAATA
*
87630 TATCGATACAATG
1 TATCGATACAATA
87643 TATCGATACA
1 TATCGATACA
87653 GAGAATGTTG
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
13 21 1.00
ACGTcount: A:0.39, C:0.19, G:0.11, T:0.31
Consensus pattern (13 bp):
TATCGATACAATA
Found at i:88543 original size:15 final size:15
Alignment explanation
Indices: 88523--88554 Score: 64
Period size: 15 Copynumber: 2.1 Consensus size: 15
88513 GCTGGGGAGG
88523 ATTCCGTAGGGTACC
1 ATTCCGTAGGGTACC
88538 ATTCCGTAGGGTACC
1 ATTCCGTAGGGTACC
88553 AT
1 AT
88555 AAACCTAGAT
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.22, C:0.25, G:0.25, T:0.28
Consensus pattern (15 bp):
ATTCCGTAGGGTACC
Found at i:95049 original size:79 final size:79
Alignment explanation
Indices: 94966--95315 Score: 322
Period size: 79 Copynumber: 4.4 Consensus size: 79
94956 TCTAACTCCA
* * * * * *
94966 TTATTTCTAAGGGGATACTTTAACTCCGGTTTTATTTTTAAAACACTAATTTTTCACAATCGGGG
1 TTATTTCTAAGGGGATACTCTAACTCCGATTTTATTTCTAAAACACTGATTTTCCACAATCAGGG
95031 ATACTCCAACCCCG
66 ATACTCCAACCCCG
* * * *
95045 TTATTTCTAAAGGGATACTCTAAC-CCCAGTTTTATTTCTAAAACACCGATGTTCCACAATCAGG
1 TTATTTCTAAGGGGATACTCTAACTCCGA-TTTTATTTCTAAAACACTGATTTTCCACAATCAGG
*
95109 GATACTCCAACCCTG
65 GATACTCCAACCCCG
* ** * * *
95124 TTATTTGC-GAGGAAATACTCCAAC-CCTGACTTTATTTCTAAAACA-TCGATTTTCCATAATCA
1 TTATTT-CTAAGGGGATACTCTAACTCC-GATTTTATTTCTAAAACACT-GATTTTCCACAATCA
*
95186 GGGATACTCCAACCCCA
63 GGGATACTCCAACCCCG
* * * * *
95203 TTATTAT-TGAA-GGGATACTCTAA-TCTCGATTTTATTTCCAAAATATTGATTTT-TACCATC-
1 TTATT-TCT-AAGGGGATACTCTAACTC-CGATTTTATTTCTAAAACACTGATTTTCCACAATCA
*
95263 GAGGATACTCCAACCCTG
63 G-GGATACTCCAACCCCG
* * *
95281 TTATTTCTGAGGGGATACTTTAACTCCGTTTTTAT
1 TTATTTCTAAGGGGATACTCTAACTCCGATTTTAT
95316 CTCCAAAATA
Statistics
Matches: 219, Mismatches: 38, Indels: 29
0.77 0.13 0.10
Matches are distributed among these distances:
77 3 0.01
78 45 0.21
79 165 0.75
80 6 0.03
ACGTcount: A:0.29, C:0.23, G:0.13, T:0.35
Consensus pattern (79 bp):
TTATTTCTAAGGGGATACTCTAACTCCGATTTTATTTCTAAAACACTGATTTTCCACAATCAGGG
ATACTCCAACCCCG
Found at i:95069 original size:28 final size:30
Alignment explanation
Indices: 95028--95086 Score: 86
Period size: 28 Copynumber: 2.0 Consensus size: 30
95018 TTCACAATCG
95028 GGGATACTCCAACCCC-G-TTATTTCTAAA
1 GGGATACTCCAACCCCAGTTTATTTCTAAA
*
95056 GGGATACTCTAACCCCAGTTTTATTTCTAAA
1 GGGATACTCCAACCCCAG-TTTATTTCTAAA
95087 ACACCGATGT
Statistics
Matches: 27, Mismatches: 1, Indels: 3
0.87 0.03 0.10
Matches are distributed among these distances:
28 15 0.56
29 1 0.04
31 11 0.41
ACGTcount: A:0.29, C:0.25, G:0.14, T:0.32
Consensus pattern (30 bp):
GGGATACTCCAACCCCAGTTTATTTCTAAA
Found at i:95207 original size:158 final size:157
Alignment explanation
Indices: 94996--95286 Score: 365
Period size: 158 Copynumber: 1.8 Consensus size: 157
94986 TAACTCCGGT
* * * *
94996 TTTATTTTTAAAACACTAATTTTTCACAATCGGGGATACTCCAACCCCGTTATT-TCTAAAGGGA
1 TTTATTTCTAAAACACTAATTTTCCACAATCAGGGATACTCCAACCCCATTATTAT-TAAAGGGA
*
95060 TACTCTAACCCC-AGTTTTATTTCTAAAACACCGATGTTCCACAATC-AGGGATACTCCAACCCT
65 TACTCTAACCCCGA-TTTTATTTCCAAAACACCGAT-TTCCACAATCGA-GGATACTCCAACCCT
95123 GTTATTTGCGAGGAAATACTCCAACCCTGAC
127 GTTATTTGCGAGGAAATACTCCAACCCTGAC
* * *
95154 TTTATTTCTAAAACA-TCGATTTTCCATAATCAGGGATACTCCAACCCCATTATTATTGAAGGGA
1 TTTATTTCTAAAACACT-AATTTTCCACAATCAGGGATACTCCAACCCCATTATTATTAAAGGGA
* * * ** ** *
95218 TACTCTAATCTCGATTTTATTTCCAAAATATTGATTTTTACCATCGAGGATACTCCAACCCTGTT
65 TACTCTAACCCCGATTTTATTTCCAAAACACCGATTTCCACAATCGAGGATACTCCAACCCTGTT
95283 ATTT
130 ATTT
95287 CTGAGGGGAT
Statistics
Matches: 113, Mismatches: 16, Indels: 9
0.82 0.12 0.07
Matches are distributed among these distances:
157 30 0.27
158 81 0.72
159 2 0.02
ACGTcount: A:0.30, C:0.24, G:0.12, T:0.34
Consensus pattern (157 bp):
TTTATTTCTAAAACACTAATTTTCCACAATCAGGGATACTCCAACCCCATTATTATTAAAGGGAT
ACTCTAACCCCGATTTTATTTCCAAAACACCGATTTCCACAATCGAGGATACTCCAACCCTGTTA
TTTGCGAGGAAATACTCCAACCCTGAC
Found at i:95576 original size:23 final size:22
Alignment explanation
Indices: 95545--95593 Score: 53
Period size: 23 Copynumber: 2.2 Consensus size: 22
95535 CGTCCCTTCT
**
95545 TTTTATGTACTTTTGTATGTTTA
1 TTTTATGTAAATTTGTATG-TTA
* *
95568 TTTTGTGTAAATTTGTCTGTTA
1 TTTTATGTAAATTTGTATGTTA
95590 TTTT
1 TTTT
95594 TCTTTTTTAC
Statistics
Matches: 22, Mismatches: 4, Indels: 1
0.81 0.15 0.04
Matches are distributed among these distances:
22 7 0.32
23 15 0.68
ACGTcount: A:0.16, C:0.04, G:0.14, T:0.65
Consensus pattern (22 bp):
TTTTATGTAAATTTGTATGTTA
Found at i:100170 original size:28 final size:28
Alignment explanation
Indices: 100130--100192 Score: 108
Period size: 28 Copynumber: 2.2 Consensus size: 28
100120 AAAATTCTGA
*
100130 GAAGACCTAATAACAAAGGGCCAATCGG
1 GAAGTCCTAATAACAAAGGGCCAATCGG
*
100158 GAAGTCCTAATAACAATGGGCCAATCGG
1 GAAGTCCTAATAACAAAGGGCCAATCGG
100186 GAAGTCC
1 GAAGTCC
100193 CTTTCGAAAA
Statistics
Matches: 33, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
28 33 1.00
ACGTcount: A:0.38, C:0.22, G:0.25, T:0.14
Consensus pattern (28 bp):
GAAGTCCTAATAACAAAGGGCCAATCGG
Found at i:100279 original size:11 final size:12
Alignment explanation
Indices: 100228--100282 Score: 58
Period size: 12 Copynumber: 4.6 Consensus size: 12
100218 GGTAAAAGCA
100228 AAAAAAAATGAG
1 AAAAAAAATGAG
* *
100240 AAACACAA-GAG
1 AAAAAAAATGAG
*
100251 AAACAAAAATGAC
1 AAA-AAAAATGAG
*
100264 AAAAAAAAAGAG
1 AAAAAAAATGAG
100276 AAAAAAA
1 AAAAAAA
100283 TAAAAAATAT
Statistics
Matches: 34, Mismatches: 7, Indels: 4
0.76 0.16 0.09
Matches are distributed among these distances:
11 6 0.18
12 23 0.68
13 5 0.15
ACGTcount: A:0.76, C:0.07, G:0.13, T:0.04
Consensus pattern (12 bp):
AAAAAAAATGAG
Found at i:101542 original size:30 final size:30
Alignment explanation
Indices: 101508--101580 Score: 110
Period size: 30 Copynumber: 2.4 Consensus size: 30
101498 ACAACCTTTC
*
101508 TTCAAAGTCCACAATTTAGTGACATCTCTT
1 TTCAAAGTCCACAACTTAGTGACATCTCTT
* *
101538 TTCAAAGTCCACGACTTAGTGACATCTTTT
1 TTCAAAGTCCACAACTTAGTGACATCTCTT
*
101568 TTCAAAGCCCACA
1 TTCAAAGTCCACA
101581 TGAGTTGATA
Statistics
Matches: 38, Mismatches: 5, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
30 38 1.00
ACGTcount: A:0.30, C:0.26, G:0.11, T:0.33
Consensus pattern (30 bp):
TTCAAAGTCCACAACTTAGTGACATCTCTT
Found at i:101881 original size:186 final size:186
Alignment explanation
Indices: 101562--101971 Score: 463
Period size: 186 Copynumber: 2.2 Consensus size: 186
101552 CTTAGTGACA
* * * *
101562 TCTT-TTTTCAAAGCCCACATGAGTTGATAGCA-CCTTTTATGCCTCAAAGAGCAAGACGCCTTT
1 TCTTCTTTTCAAAGCCCACACGAGTTG-TGGCACCCTTTTATGCCTCAAAAAGCAAGACGCCCTT
* * * *
101625 TTGTTTTCAAAGCCTACACGAGTTGGTGGCACCCTTTTGTCCTCAAAGTGTAGGACACCTATTCC
65 TTCTTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTTGTCCTCAAAGAGCAGGACACCTATTCC
** *
101690 TTTTCAAAGCCCACAAGAGTTGGTGACA-CCCTTTAGTCCTCAAAAAGAAGGACACTT
130 TTTTCAAAGCCCACAAGAACTGGTGACATCCCTTTA-TCCTCAAAAAGAAGGACACCT
* * *
101747 TTTTCTTTTCAAAGCCCACACGAGTTCGTGGCACCCTTTTA-GTCCTCAAAAAGCAGGATGCCCT
1 TCTTCTTTTCAAAGCCCACACGAGTT-GTGGCACCCTTTTATG-CCTCAAAAAGCAAGACGCCCT
* * * ** * *
101811 TTTCTTTT-TAAGCCCACACGAGTTGGTGGCATCCTTTTGTCCTCAAAGAGCATGATGCCTTTTG
64 TTTCTTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTTGTCCTCAAAGAGCAGGACACCTATTC
* * ** * * *
101875 CTTTTCAAAGCCCACATGAACTGGTGGCATCTTTTTATCCTCAAAGAGCAGGGCACCT
129 CTTTTCAAAGCCCACAAGAACTGGTGACATCCCTTTATCCTCAAAAAGAAGGACACCT
*
101933 TCTTCTTTTCAATA-CCCACACGAGTTGGTGGCACTCTTT
1 TCTTCTTTTCAA-AGCCCACACGAGTT-GTGGCACCCTTT
101972 AGTGCTTGAA
Statistics
Matches: 188, Mismatches: 31, Indels: 11
0.82 0.13 0.05
Matches are distributed among these distances:
185 3 0.02
186 147 0.78
187 38 0.20
ACGTcount: A:0.24, C:0.26, G:0.18, T:0.31
Consensus pattern (186 bp):
TCTTCTTTTCAAAGCCCACACGAGTTGTGGCACCCTTTTATGCCTCAAAAAGCAAGACGCCCTTT
TCTTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTTGTCCTCAAAGAGCAGGACACCTATTCCT
TTTCAAAGCCCACAAGAACTGGTGACATCCCTTTATCCTCAAAAAGAAGGACACCT
Found at i:101984 original size:62 final size:61
Alignment explanation
Indices: 101566--101974 Score: 396
Period size: 62 Copynumber: 6.6 Consensus size: 61
101556 GTGACATCTT
* * * * * * *
101566 TTTTCAAAGCCCACATGAGTTGATAGCACCTTTTA-TGCCTCAAAGAGCAAGACGCCTTTTTG
1 TTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTAGT-CCTCAAAGAGCAGGACACC-TTTTC
* * * * *
101628 TTTTCAAAGCCTACACGAGTTGGTGGCACCCTTTTGTCCTCAAAGTGTAGGACACCTATTCC
1 TTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTAGTCCTCAAAGAGCAGGACACCT-TTTC
* * * * *
101690 TTTTCAAAGCCCACAAGAGTTGGTGACACCCTTTAGTCCTCAAAAAGAAGGACACTTTTTTC
1 TTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTAGTCCTCAAAGAGCAGGACAC-CTTTTC
* *
101752 TTTTCAAAGCCCACACGAGTTCGTGGCACCCTTTTAGTCCTCAAAAAGCAGGATGC-CCTTTTC
1 TTTTCAAAGCCCACACGAGTTGGTGGCACCC-TTTAGTCCTCAAAGAGCAGGA--CACCTTTTC
* * * * **
101815 TTTT-TAAGCCCACACGAGTTGGTGGCATCCTTTTGTCCTCAAAGAGCATGATGCCTTTTGC
1 TTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTAGTCCTCAAAGAGCAGGACACCTTTT-C
* ** ** *
101876 TTTTCAAAGCCCACATGAACTGGTGGCATCTTTTTA-TCCTCAAAGAGCAGGGCACCTTCTTC
1 TTTTCAAAGCCCACACGAGTTGGTGGCA-CCCTTTAGTCCTCAAAGAGCAGGACACCTT-TTC
*
101938 TTTTCAATA-CCCACACGAGTTGGTGGCACTCTTTAGT
1 TTTTCAA-AGCCCACACGAGTTGGTGGCACCCTTTAGT
101975 GCTTGAAGAG
Statistics
Matches: 285, Mismatches: 49, Indels: 26
0.79 0.14 0.07
Matches are distributed among these distances:
60 6 0.02
61 30 0.11
62 210 0.74
63 37 0.13
64 1 0.00
65 1 0.00
ACGTcount: A:0.24, C:0.26, G:0.18, T:0.31
Consensus pattern (61 bp):
TTTTCAAAGCCCACACGAGTTGGTGGCACCCTTTAGTCCTCAAAGAGCAGGACACCTTTTC
Found at i:102171 original size:45 final size:44
Alignment explanation
Indices: 102116--102601 Score: 303
Period size: 45 Copynumber: 11.5 Consensus size: 44
102106 TTGTTTTTTT
*
102116 CTTTGTCCTCAAAGAGTAGGACACACTTCATTTCCTTCTTTTCC
1 CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
*
102160 CTTTTGTCCTCAAAGAGCAGGACACACTTTATTTCC--CTTTT-C
1 C-TTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* * *
102202 CTTTGTCCTTAAATAGCAAGGTGCAC-C-TCATTTCCTTCTTTTCC
1 CTTTGTCCTCAAAGAGC-AGG-ACACACTTCATTTCCTTCTTTTCC
* * * * *
102246 CTTAGTCTTCAAAGAGCAGG-C-CGC--CTTTTCCTT-TTCT-C
1 CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* * * *
102284 CGTTGTCCTCAAAGAACAGGACACACTTTATTTCCGTCTTTTCC
1 CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* * * *
102328 TTTTTGTCCTCAAAGAGCATGAAACACTTTATTTCC--CTTTT-C
1 -CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* *
102370 CTTTGTCCTTAAAGAGCATGGTGCAC-C-TCATTTCCTTCTTTTCC
1 CTTTGTCCTCAAAGAGCA-GG-ACACACTTCATTTCCTTCTTTTCC
* * * ** *
102414 CTTAGTTCTCAAAGAGCAAGATGC-C-T--TTTCC-T-TTTCCC
1 CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* * * *
102452 CTTTGTCCTTAAAGAGTATGACACATTTCATTTCCTT-TTTTCC
1 CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* * * **
102495 CATTTGTCCTCTAAGAACAGGACGCA-TTTTTTTCCTT-TTTT--
1 C-TTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
* * * *
102536 CTTTATCCTCAAAGAGTAGGGCA-ACCTT-ATTTCCTTAC-CTTCC
1 CTTTGTCCTCAAAGAGCAGGACACA-CTTCATTTCCTT-CTTTTCC
*
102579 CTTTTAGTCGTCAAAGAGCAGGA
1 C-TTT-GTCCTCAAAGAGCAGGA
102602 TGCCTTCCCT
Statistics
Matches: 340, Mismatches: 69, Indels: 65
0.72 0.15 0.14
Matches are distributed among these distances:
38 39 0.11
39 6 0.02
40 40 0.12
41 51 0.15
42 23 0.07
43 53 0.16
44 53 0.16
45 75 0.22
ACGTcount: A:0.21, C:0.27, G:0.13, T:0.39
Consensus pattern (44 bp):
CTTTGTCCTCAAAGAGCAGGACACACTTCATTTCCTTCTTTTCC
Found at i:102396 original size:168 final size:167
Alignment explanation
Indices: 102118--102551 Score: 577
Period size: 168 Copynumber: 2.6 Consensus size: 167
102108 GTTTTTTTCT
* *
102118 TTGTCCTCAAAGAGTAGGACACACTTCATTTCCTTCTTTTCCCTTTTGTCCTCAAAGAGCAGGAC
1 TTGTCCTCAAAGAGTAGGACACACTTTATTTCC-TCTTTTCCCTTTTGTCCTCAAAGAGCAGGAA
*
102183 ACACTTTATTTCCCTTTTCCTTTGTCCTTAAATAGCAAGGTGCACCTCATTTCCTTCTTTTCCCT
65 ACACTTTATTTCCCTTTTCCTTTGTCCTTAAAGAGCAAGGTGCACCTCATTTCCTTCTTTTCCCT
* * *
102248 TAG-TCTTCAAAGAGCAGGCCGCCTTTTCCTTTTCTCCG
130 TAGTTC-TCAAAGAGCAAGACGCCTTTTCCTTTTCCCCG
** * *
102286 TTGTCCTCAAAGAACAGGACACACTTTATTTCCGTCTTTTCCTTTTTGTCCTCAAAGAGCATGAA
1 TTGTCCTCAAAGAGTAGGACACACTTTATTTCC-TCTTTTCCCTTTTGTCCTCAAAGAGCAGGAA
*
102351 ACACTTTATTTCCCTTTTCCTTTGTCCTTAAAGAGCATGGTGCACCTCATTTCCTTCTTTTCCCT
65 ACACTTTATTTCCCTTTTCCTTTGTCCTTAAAGAGCAAGGTGCACCTCATTTCCTTCTTTTCCCT
* *
102416 TAGTTCTCAAAGAGCAAGATGCCTTTTCCTTTTCCCCT
130 TAGTTCTCAAAGAGCAAGACGCCTTTTCCTTTTCCCCG
* * * * * * *
102454 TTGTCCTTAAAGAGTATGACACA-TTTCATTTCCTTTTTTCCCATTTGTCCTCTAAGAACAGGAC
1 TTGTCCTCAAAGAGTAGGACACACTTT-ATTTCCTCTTTTCCCTTTTGTCCTCAAAGAGCAGGAA
* * * * * *
102518 GCA-TTTTTTTCCTTTTTTCTTTATCCTCAAAGAG
65 ACACTTTATTTCCCTTTTCCTTTGTCCTTAAAGAG
102552 TAGGGCAACC
Statistics
Matches: 233, Mismatches: 31, Indels: 6
0.86 0.11 0.02
Matches are distributed among these distances:
166 26 0.11
167 29 0.12
168 176 0.76
169 2 0.01
ACGTcount: A:0.21, C:0.27, G:0.12, T:0.40
Consensus pattern (167 bp):
TTGTCCTCAAAGAGTAGGACACACTTTATTTCCTCTTTTCCCTTTTGTCCTCAAAGAGCAGGAAA
CACTTTATTTCCCTTTTCCTTTGTCCTTAAAGAGCAAGGTGCACCTCATTTCCTTCTTTTCCCTT
AGTTCTCAAAGAGCAAGACGCCTTTTCCTTTTCCCCG
Found at i:102680 original size:53 final size:53
Alignment explanation
Indices: 102612--102732 Score: 199
Period size: 53 Copynumber: 2.3 Consensus size: 53
102602 TGCCTTCCCT
* *
102612 TTTTAAAGCCCACACTCTTGGGTTACACCTTTTAGGAGT-AAGATGCTTTTTCC
1 TTTTAAAGCCCACACTATTGGGTTACACCTTTTAGGA-TCAAGATGCCTTTTCC
*
102665 TTTTAAAGCCCACACTATTTGGTTACACCTTTTAGGATCAAGATGCCTTTTCC
1 TTTTAAAGCCCACACTATTGGGTTACACCTTTTAGGATCAAGATGCCTTTTCC
102718 TTTTAAAGCCCACAC
1 TTTTAAAGCCCACAC
102733 AAGTTGGTGG
Statistics
Matches: 64, Mismatches: 3, Indels: 2
0.93 0.04 0.03
Matches are distributed among these distances:
52 1 0.02
53 63 0.98
ACGTcount: A:0.25, C:0.25, G:0.14, T:0.36
Consensus pattern (53 bp):
TTTTAAAGCCCACACTATTGGGTTACACCTTTTAGGATCAAGATGCCTTTTCC
Found at i:102862 original size:61 final size:59
Alignment explanation
Indices: 102722--102956 Score: 199
Period size: 61 Copynumber: 3.8 Consensus size: 59
102712 TTTTCCTTTT
* * * *
102722 AAAGCCCACACAAGTTGGTGGCACATTTC-ATTCCTTAAAGAGCAGGACGCTTTCTTTTC
1 AAAGCCCACACAAGTTGGTGGCAC-TTTCTAGTCCTCAAAGAGCAAGACGCTTTCTTTGC
* *
102781 AAAGCCCACATAAGTTGGTGGCACTTTCTAGTCCTCAAAGAGCAAGATGTCTTCTCTTTGC
1 AAAGCCCACACAAGTTGGTGGCACTTTCTAGTCCTCAAAGAGCAAGACG-CTT-TCTTTGC
** * * *
102842 AAAGCTTACACAAGTTGGTGGCACCTTT-TAGT-CTCCAAAGAGCAGGACACTTTCCTTTTCCTT
1 AAAGCCCACACAAGTTGGTGGCA-CTTTCTAGTCCT-CAAAGAGCAAGACGCTTT-C--TT--TG
102905 C
59 C
* * * *
102906 TGAAGCCCACATAAGTTGGTAGCACCTTT-TAGTCCTCAAAGAGCAGGACGC
1 -AAAGCCCACACAAGTTGGTGGCA-CTTTCTAGTCCTCAAAGAGCAAGACGC
102957 ACTTTATTTC
Statistics
Matches: 145, Mismatches: 19, Indels: 18
0.80 0.10 0.10
Matches are distributed among these distances:
58 4 0.03
59 40 0.28
60 9 0.06
61 41 0.28
62 6 0.04
64 2 0.01
65 41 0.28
66 2 0.01
ACGTcount: A:0.27, C:0.26, G:0.20, T:0.28
Consensus pattern (59 bp):
AAAGCCCACACAAGTTGGTGGCACTTTCTAGTCCTCAAAGAGCAAGACGCTTTCTTTGC
Found at i:102987 original size:40 final size:41
Alignment explanation
Indices: 102937--103273 Score: 309
Period size: 40 Copynumber: 8.3 Consensus size: 41
102927 GCACCTTTTA
*
102937 GTCCTCAAAGAGCAGGACGCACTTTATTTC-TTTTCCCTTT
1 GTCCTCAAAGAGCAGGACGCACTTTATTTCTTTTTTCCTTT
* *
102977 GTCCTCAAAGAGTAGGACACACTTTATTTC-TTTTTCTCTTT
1 GTCCTCAAAGAGCAGGACGCACTTTATTTCTTTTTTC-CTTT
*
103018 GTCCTCAAAGAGCATGACGCACTTTATTTTCTTTTCTT-CTTT
1 GTCCTCAAAGAGCAGGACGCACTTTA-TTTCTTTT-TTCCTTT
* * * *
103060 GTCTTCAAAAAGCAGGACACACTTAATTTTCTTCTTTTCCTTT
1 GTCCTCAAAGAGCAGGACGCACTTTA-TTTCTT-TTTTCCTTT
* * *
103103 GTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTT
1 GTCCTCAAAGAGCAGGACGCACTTTATTT-C-TTTTTTCCTTT
** * * *
103146 GTCCTCGGAGAGCA-G--G-A-TGTA-CTCCTTTTTCCTTT
1 GTCCTCAAAGAGCAGGACGCACTTTATTTCTTTTTTCCTTT
* * *
103181 GTCCTCAAGGAGCAGGACTCA-TTTCA-TTCTCTTTTCCTTT
1 GTCCTCAAAGAGCAGGACGCACTTT-ATTTCTTTTTTCCTTT
* * *
103221 GTCCTCAAAGAGCAAGACGCATTTTATTTCCTTTTTTTCTTT
1 GTCCTCAAAGAGCAGGACGCACTTTATTT-CTTTTTTCCTTT
*
103263 GTCCTCGAAGA
1 GTCCTCAAAGA
103274 ATAGGATGTA
Statistics
Matches: 243, Mismatches: 38, Indels: 30
0.78 0.12 0.10
Matches are distributed among these distances:
35 21 0.09
36 2 0.01
37 1 0.00
38 3 0.01
39 4 0.02
40 65 0.27
41 32 0.13
42 62 0.26
43 49 0.20
44 4 0.02
ACGTcount: A:0.20, C:0.24, G:0.14, T:0.42
Consensus pattern (41 bp):
GTCCTCAAAGAGCAGGACGCACTTTATTTCTTTTTTCCTTT
Found at i:103129 original size:85 final size:83
Alignment explanation
Indices: 102937--103273 Score: 277
Period size: 85 Copynumber: 4.1 Consensus size: 83
102927 GCACCTTTTA
* * * *
102937 GTCCTCAAAGAGCAGGACGCACTTTA-TTTCTTTTC-CCTTTGTCCTCAAAGAGTAGGACACACT
1 GTCCTCAAAGAGCAAGACGCACTTTATTTTCTTTTCTTCTTTGTCCTCAAAAAGCAGGACACACT
*
103000 TTATTTCTTTTTCTCTTT
66 TAATTTCTTTTTCTCTTT
* *
103018 GTCCTCAAAGAGCATGACGCACTTTATTTTCTTTTCTTCTTTGTCTTCAAAAAGCAGGACACACT
1 GTCCTCAAAGAGCAAGACGCACTTTATTTTCTTTTCTTCTTTGTCCTCAAAAAGCAGGACACACT
103083 TAATTTTCTTCTTT-TCCTTT
66 TAA-TTTCTT-TTTCT-CTTT
* * * * ** *
103103 GTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTTGTCCTCGGAGAGCAGG----A-
1 GTCCTCAAAGAGCAAGACGCACTTTATTTTCTTTTCTT-CTTTGTCCTCAAAAAGCAGGACACAC
* *
103163 TGT-ACTCCTTTTTC-CTTT
65 T-TAATTTCTTTTTCTCTTT
* * * * * * * *
103181 GTCCTCAAGGAGCAGGACTCA-TTTCATTCTCTTTTC--CTTTGTCCTCAAAGAGCAAGACGCAT
1 GTCCTCAAAGAGCAAGACGCACTTT-ATTTTCTTTTCTTCTTTGTCCTCAAAAAGCAGGACACAC
* *
103243 TTTATTTCCTTTTTTTCTTT
65 TTAATTT-CTTTTTCTCTTT
*
103263 GTCCTCGAAGA
1 GTCCTCAAAGA
103274 ATAGGATGTA
Statistics
Matches: 207, Mismatches: 32, Indels: 33
0.76 0.12 0.12
Matches are distributed among these distances:
75 17 0.08
77 3 0.01
78 29 0.14
79 5 0.02
80 7 0.03
81 33 0.16
82 24 0.12
83 26 0.13
84 7 0.03
85 40 0.19
86 16 0.08
ACGTcount: A:0.20, C:0.24, G:0.14, T:0.42
Consensus pattern (83 bp):
GTCCTCAAAGAGCAAGACGCACTTTATTTTCTTTTCTTCTTTGTCCTCAAAAAGCAGGACACACT
TAATTTCTTTTTCTCTTT
Found at i:103321 original size:77 final size:74
Alignment explanation
Indices: 103211--103376 Score: 179
Period size: 75 Copynumber: 2.2 Consensus size: 74
103201 ATTTCATTCT
* * * * * *
103211 CTTTTCCTTTGTCCTCAAAGAGCAAGACGCATTTTATTTCCTTTTTTTCTTTGTCCTCGAAGAAT
1 CTTTTCCTTTGTCCTCAAAGAACAAGACCCATTTCA-TT-CTCTTTTCCTTTGTCCTCAAAGAAT
**
103276 AGGATGTACTC
64 AGGACATACTC
* * * * * *
103287 ATTTTTCCTTTGTTCTCAAGGAATAGGACCCATTTCATTCTCTTTTCCTTTGTCCTCAAAGAGTA
1 -CTTTTCCTTTGTCCTCAAAGAACAAGACCCATTTCATTCTCTTTTCCTTTGTCCTCAAAGAATA
103352 GGACATACTC
65 GGACATACTC
103362 CTTTTCCTTTGTCCT
1 CTTTTCCTTTGTCCT
103377 TAAAAAGTAG
Statistics
Matches: 73, Mismatches: 16, Indels: 3
0.79 0.17 0.03
Matches are distributed among these distances:
74 13 0.18
75 30 0.41
76 2 0.03
77 28 0.38
ACGTcount: A:0.20, C:0.24, G:0.13, T:0.43
Consensus pattern (74 bp):
CTTTTCCTTTGTCCTCAAAGAACAAGACCCATTTCATTCTCTTTTCCTTTGTCCTCAAAGAATAG
GACATACTC
Found at i:103336 original size:40 final size:39
Alignment explanation
Indices: 102937--103388 Score: 224
Period size: 40 Copynumber: 11.4 Consensus size: 39
102927 GCACCTTTTA
*
102937 GTCCTCAAAGAGCAGGACGCACTTT-ATT-TCTTTTCCCTTT
1 GTCCTCAAAGAGTAGGAC-CA-TTTCATTCTCTTTT-CCTTT
102977 GTCCTCAAAGAGTAGGACACACTTT-ATT-TCTTTTTCTCTTT
1 GTCCTCAAAGAGTAGGAC-CA-TTTCATTCTC-TTTTC-CTTT
* * *
103018 GTCCTCAAAGAGCATGACGCACTTT-ATTTTCTTTTCTTCTTT
1 GTCCTCAAAGAGTAGGAC-CA-TTTCATTCTCTTTTC--CTTT
* * * * *
103060 GTCTTCAAAAAGCAGGACACACTTAATTTTCTTCTTTTCCTTT
1 GTCCTCAAAGAGTAGGAC-CATTTCA--TTC-TCTTTTCCTTT
* * *
103103 GTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTT
1 GTCCTCAAAGAGTAGGAC-CATTTCA-TT-C-TCTTTTCCTTT
** * * *
103146 GTCCTCGGAGAGCAGG---ATGT-ACTC-CTTTTTCCTTT
1 GTCCTCAAAGAGTAGGACCATTTCATTCTC-TTTTCCTTT
* *
103181 GTCCTCAAGGAGCAGGACTCATTTCATTCTCTTTTCCTTT
1 GTCCTCAAAGAGTAGGAC-CATTTCATTCTCTTTTCCTTT
* * * * *
103221 GTCCTCAAAGAGCAAGACGCATTTTATTTCCTTTTTTTCTTT
1 GTCCTCAAAGAGTAGGAC-CATTTCA-TT-CTCTTTTCCTTT
* * * *
103263 GTCCTCGAAGAATAGG---ATGT-ACTCAT-TTTTCCTTT
1 GTCCTCAAAGAGTAGGACCATTTCATTC-TCTTTTCCTTT
* * *
103298 GTTCTCAAGGAATAGGACCCATTTCATTCTCTTTTCCTTT
1 GTCCTCAAAGAGTAGGA-CCATTTCATTCTCTTTTCCTTT
*
103338 GTCCTCAAAGAGTAGGA-CA--T-ACTC-CTTTTCCTTT
1 GTCCTCAAAGAGTAGGACCATTTCATTCTCTTTTCCTTT
* *
103372 GTCCTTAAAAAGTAGGA
1 GTCCTCAAAGAGTAGGA
103389 TGCCCCTTCC
Statistics
Matches: 332, Mismatches: 55, Indels: 56
0.75 0.12 0.13
Matches are distributed among these distances:
34 25 0.08
35 47 0.14
36 4 0.01
37 2 0.01
38 6 0.02
39 10 0.03
40 89 0.27
41 43 0.13
42 50 0.15
43 47 0.14
44 2 0.01
45 7 0.02
ACGTcount: A:0.21, C:0.23, G:0.14, T:0.41
Consensus pattern (39 bp):
GTCCTCAAAGAGTAGGACCATTTCATTCTCTTTTCCTTT
Found at i:103371 original size:117 final size:118
Alignment explanation
Indices: 103092--103351 Score: 432
Period size: 117 Copynumber: 2.2 Consensus size: 118
103082 TTAATTTTCT
*
103092 TCTTTTCCTTTGTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTTGTCCTCGGAGA
1 TCTTTTCCTTTGTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTTGTCCTCGAAGA
* * * *
103157 GCAGGATGTACTCCTTTTTCCTTTGTCCTCAAGGAGCAGGACTCATTTCATTC
66 ACAGGATGTACTCATTTTTCCTTTGTCCTCAAGGAACAGGACCCATTTCATTC
*
103210 TCTTTTCCTTTGTCCTCAAAGAGCAAGACGCATTTTATTTCCTTTTTTT-CTTTGTCCTCGAAGA
1 TCTTTTCCTTTGTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTTGTCCTCGAAGA
* * *
103274 ATAGGATGTACTCATTTTTCCTTTGTTCTCAAGGAATAGGACCCATTTCATTC
66 ACAGGATGTACTCATTTTTCCTTTGTCCTCAAGGAACAGGACCCATTTCATTC
103327 TCTTTTCCTTTGTCCTCAAAGAGTA
1 TCTTTTCCTTTGTCCTCAAAGAGTA
103352 GGACATACTC
Statistics
Matches: 132, Mismatches: 10, Indels: 1
0.92 0.07 0.01
Matches are distributed among these distances:
117 84 0.64
118 48 0.36
ACGTcount: A:0.20, C:0.23, G:0.15, T:0.42
Consensus pattern (118 bp):
TCTTTTCCTTTGTCCTCAAAGAGTAAGACGCATTTTATTTCCTTTTTTTCCTTTGTCCTCGAAGA
ACAGGATGTACTCATTTTTCCTTTGTCCTCAAGGAACAGGACCCATTTCATTC
Found at i:104024 original size:14 final size:14
Alignment explanation
Indices: 104005--104033 Score: 58
Period size: 14 Copynumber: 2.1 Consensus size: 14
103995 GGTTTTACCT
104005 AGATGTATCGATAC
1 AGATGTATCGATAC
104019 AGATGTATCGATAC
1 AGATGTATCGATAC
104033 A
1 A
104034 TTTCTTAATG
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 15 1.00
ACGTcount: A:0.38, C:0.14, G:0.21, T:0.28
Consensus pattern (14 bp):
AGATGTATCGATAC
Found at i:106508 original size:79 final size:79
Alignment explanation
Indices: 106386--106793 Score: 280
Period size: 79 Copynumber: 5.2 Consensus size: 79
106376 TCATCGATGT
* * * *
106386 TTTTATTTCCAAAATA-TAATTTTCCACCATCGAGGACACTCCAATCCC-ATTATTT-T-TGAGG
1 TTTTATTTCCAAAACACTAATTTTCCACAATCGGGGATACTCCAA-CCCTATTATTTCTATGA--
* *
106447 GGATACTTCAACCCC-G
63 AGATACTCCAACCCCAG
* *
106463 ATTTTATTTCCAAAACACTAATTTTTCATAATCGGGGATACTCCAACCCTATTATTTCTATGAAG
1 -TTTTATTTCCAAAACACTAATTTTCCACAATCGGGGATACTCCAACCCTATTATTTCTATGAAG
106528 ATACTCCAACCCCAG
65 ATACTCCAACCCCAG
* * * * * * *
106543 TTTTATTTCCAAAACACTGATGTTCCACAATCAGGGATACTCTAACCCTGTTATCTTTTA-G-GG
1 TTTTATTTCCAAAACACTAATTTTCCACAATCGGGGATACTCCAACCCTATTAT-TTCTATGAAG
* ** *
106606 TTTTTTCCAACCCTAG
65 -ATACTCCAACCCCAG
* * * * ** * * *
106622 CTTTATTTCTAAAACA-TCGATTTTCCATAATCGGGGATACTTTAACCCTGTTATTTTCGA-GGA
1 TTTTATTTCCAAAACACT-AATTTTCCACAATCGGGGATACTCCAACCCTATTA-TTTCTATGAA
*
106685 GATACTCCAACCCTAG
64 GATACTCCAACCCCAG
* * * * * * ** *
106701 TTTCATTTCCAAAACATTGATTTTCCACCATCGAGGATACTCTAACCCCGTTATTTCCGA-GAAG
1 TTTTATTTCCAAAACACTAATTTTCCACAATCGGGGATACTCCAACCCTATTATTT-CTATGAAG
* *
106765 ATACTCTAA-CCCTG
65 ATACTCCAACCCCAG
*
106779 TTTTTATCTCCAAAA
1 -TTTTATTTCCAAAA
106794 TATTAAACTT
Statistics
Matches: 270, Mismatches: 47, Indels: 25
0.79 0.14 0.07
Matches are distributed among these distances:
78 26 0.10
79 232 0.86
80 9 0.03
81 3 0.01
ACGTcount: A:0.29, C:0.25, G:0.11, T:0.35
Consensus pattern (79 bp):
TTTTATTTCCAAAACACTAATTTTCCACAATCGGGGATACTCCAACCCTATTATTTCTATGAAGA
TACTCCAACCCCAG
Found at i:106676 original size:158 final size:158
Alignment explanation
Indices: 106465--106754 Score: 406
Period size: 158 Copynumber: 1.8 Consensus size: 158
106455 CAACCCCGAT
* *
106465 TTTATTTCCAAAACACTAATTTTTCATAATCGGGGATACTCCAACCCTATTA-TTTCTATGAAGA
1 TTTATTTCCAAAACACTAATTTTCCATAATCGGGGATACTCCAACCCTATTATTTTCGA-GAAGA
* *
106529 TACTCCAACCCCAGTTTTATTTCCAAAACACTGATGTTCCACAATC-AGGGATACTCTAACCCTG
65 TACTCCAACCCCAGTTTCATTTCCAAAACACTGATGTTCCACAATCGA-GGATACTCTAACCCCG
106593 TTATCTTTTAGGGTTTTTTCCAACCCTAGC
129 TTATCTTTTAGGGTTTTTTCCAACCCTAGC
* * ** * *
106623 TTTATTTCTAAAACA-TCGATTTTCCATAATCGGGGATACTTTAACCCTGTTATTTTCGAGGAGA
1 TTTATTTCCAAAACACT-AATTTTCCATAATCGGGGATACTCCAACCCTATTATTTTCGAGAAGA
* * * *
106687 TACTCCAACCCTAGTTTCATTTCCAAAACATTGATTTTCCACCATCGAGGATACTCTAACCCCGT
65 TACTCCAACCCCAGTTTCATTTCCAAAACACTGATGTTCCACAATCGAGGATACTCTAACCCCGT
106752 TAT
130 TAT
106755 TTCCGAGAAG
Statistics
Matches: 115, Mismatches: 14, Indels: 6
0.85 0.10 0.04
Matches are distributed among these distances:
157 1 0.01
158 108 0.94
159 6 0.05
ACGTcount: A:0.28, C:0.25, G:0.11, T:0.36
Consensus pattern (158 bp):
TTTATTTCCAAAACACTAATTTTCCATAATCGGGGATACTCCAACCCTATTATTTTCGAGAAGAT
ACTCCAACCCCAGTTTCATTTCCAAAACACTGATGTTCCACAATCGAGGATACTCTAACCCCGTT
ATCTTTTAGGGTTTTTTCCAACCCTAGC
Found at i:106785 original size:158 final size:154
Alignment explanation
Indices: 106390--106793 Score: 384
Period size: 158 Copynumber: 2.6 Consensus size: 154
106380 CGATGTTTTT
* * * * * *
106390 ATTTCCAAAATATAATTTTCCACCATCGAGGACACTCCAATCCCATTATTTTTGAGGGGATACT-
1 ATTTCCAAAACATGATTTTCCACCATCGAGGATACTCTAACCCCGTTA-TTTTGA-GGGATACTC
* *
106454 TCAACCCCGATTTTATTTCCAAAACACTAATTTTTCATAATCGGGGATACTCCAACCCTATTATT
64 T-AACCCTG-TTTTATTTCCAAAACACTAATTTTCCATAATCGGGGATACTCCAACCCTATTATT
* *
106519 TCTATGAAGATACTCCAACCCCAGTTTT
127 TCGATGAAGATACTCCAACCCCAGTTTC
* * * * * **
106547 ATTTCCAAAACACTGATGTTCCACAATC-AGGGATACTCTAACCCTGTTATCTTTTAGGGTTTTT
1 ATTTCCAAAACA-TGATTTTCCACCATCGA-GGATACTCTAACCCCGTTAT-TTTGAGGG-ATAC
* * * * ** *
106611 TCCAACCCTAGCTTTATTTCTAAAACA-TCGATTTTCCATAATCGGGGATACTTTAACCCTGTTA
62 TCTAACCCT-GTTTTATTTCCAAAACACT-AATTTTCCATAATCGGGGATACTCCAACCCTATTA
* *
106675 TTTTCGA-GGAGATACTCCAACCCTAGTTTC
125 -TTTCGATGAAGATACTCCAACCCCAGTTTC
* *
106705 ATTTCCAAAACATTGATTTTCCACCATCGAGGATACTCTAACCCCGTTATTTCCGAGAAGATACT
1 ATTTCCAAAACA-TGATTTTCCACCATCGAGGATACTCTAACCCCGTTATTT-TGAG-GGATACT
*
106770 CTAACCCTGTTTTTATCTCCAAAA
63 CTAACCCTG-TTTTATTTCCAAAA
106794 TATTAAACTT
Statistics
Matches: 195, Mismatches: 40, Indels: 23
0.76 0.16 0.09
Matches are distributed among these distances:
157 20 0.10
158 167 0.86
159 8 0.04
ACGTcount: A:0.29, C:0.25, G:0.11, T:0.34
Consensus pattern (154 bp):
ATTTCCAAAACATGATTTTCCACCATCGAGGATACTCTAACCCCGTTATTTTGAGGGATACTCTA
ACCCTGTTTTATTTCCAAAACACTAATTTTCCATAATCGGGGATACTCCAACCCTATTATTTCGA
TGAAGATACTCCAACCCCAGTTTC
Found at i:112138 original size:20 final size:20
Alignment explanation
Indices: 112113--112166 Score: 99
Period size: 20 Copynumber: 2.7 Consensus size: 20
112103 TTTACCTAGA
112113 TGTATCGATACATTGTTCAT
1 TGTATCGATACATTGTTCAT
*
112133 TGTATCGATACATGGTTCAT
1 TGTATCGATACATTGTTCAT
112153 TGTATCGATACATT
1 TGTATCGATACATT
112167 TTGAGTTTAC
Statistics
Matches: 32, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
20 32 1.00
ACGTcount: A:0.26, C:0.15, G:0.17, T:0.43
Consensus pattern (20 bp):
TGTATCGATACATTGTTCAT
Found at i:112194 original size:69 final size:70
Alignment explanation
Indices: 112082--112214 Score: 223
Period size: 69 Copynumber: 1.9 Consensus size: 70
112072 TTTTCACAAT
* * *
112082 TTGTATCGATACATTTTGGGTTTTACCTAGATGTATCGATACATTGTTCATTGTATCGATACATG
1 TTGTATCGATACATTTTGAGTTTTACCCAGATGTATCGATACATTGTTCAATGTATCGATACATG
112147 GTTCA
66 GTTCA
*
112152 TTGTATCGATACATTTTGAG-TTTACCCAGATGTATCGATACATTTTTCAATGTATCGATACAT
1 TTGTATCGATACATTTTGAGTTTTACCCAGATGTATCGATACATTGTTCAATGTATCGATACAT
112215 TCAGGCATTT
Statistics
Matches: 59, Mismatches: 4, Indels: 1
0.92 0.06 0.02
Matches are distributed among these distances:
69 40 0.68
70 19 0.32
ACGTcount: A:0.26, C:0.15, G:0.17, T:0.42
Consensus pattern (70 bp):
TTGTATCGATACATTTTGAGTTTTACCCAGATGTATCGATACATTGTTCAATGTATCGATACATG
GTTCA
Found at i:114608 original size:50 final size:50
Alignment explanation
Indices: 114505--114634 Score: 134
Period size: 50 Copynumber: 2.6 Consensus size: 50
114495 TATTTCTAGG
** * * * **
114505 TTTTTCATCTCAAGGATACTCCAACCCCGATTTTATTTCTAAAATATTGA
1 TTTTTCATCTCGGGGATACGCCAACCCCGATTTTATTTCCAAAACATCAA
* *
114555 TTTTTCATCTCGGGGATACGCTAACCCCGGTTTTATTTCCAAAACATCAA
1 TTTTTCATCTCGGGGATACGCCAACCCCGATTTTATTTCCAAAACATCAA
* * * *
114605 TTTTTCTTAATCGGGGATACTCCAATCCCG
1 TTTTTCAT-CTCGGGGATACGCCAACCCCG
114635 TTATTTCCGA
Statistics
Matches: 65, Mismatches: 14, Indels: 1
0.81 0.17 0.01
Matches are distributed among these distances:
50 48 0.74
51 17 0.26
ACGTcount: A:0.26, C:0.25, G:0.12, T:0.37
Consensus pattern (50 bp):
TTTTTCATCTCGGGGATACGCCAACCCCGATTTTATTTCCAAAACATCAA
Found at i:114702 original size:79 final size:78
Alignment explanation
Indices: 114566--114952 Score: 366
Period size: 79 Copynumber: 4.9 Consensus size: 78
114556 TTTTCATCTC
* * * * * * *
114566 GGGGATACGCTAACCCCGGTTTTATTTCCAAAACATCAATTTTTCTTAATCGGGGATACTCCAAT
1 GGGGATACTCCAACCCCGGTTTTATTTCTAAAATATCGA-TTTTCATAATCGGGGATACTCCAAC
*
114631 CCCGTTATTTCCGA
65 CCCGTTATTTTCGA
* * *
114645 GGGGATACTCCAACCCCGGCTTTATTTCTAAAATATTGATTTCTCATAATCGTGGATACTCCAAC
1 GGGGATACTCCAACCCCGGTTTTATTTCTAAAATATCGATTT-TCATAATCGGGGATACTCCAAC
* *
114710 CCCGTTATTTTGGT
65 CCCGTTATTTTCGA
* * * *
114724 GGGGATACTCCAACCCCGGTCTTATTTCTAAAGCT-TTGATTTTCCACAATCGGGGATACTCCAA
1 GGGGATACTCCAACCCCGGTTTTATTTCTAAA-ATATCGATTTT-CATAATCGGGGATACTCCAA
*
114788 CCCCGTTATCTTCGA
64 CCCCGTTATTTTCGA
* * ** * * *
114803 GGGGATACTCCAACCTCGATTTTATTT-TCAAAATGCCGATTTTCTATAGTCAGGGATGCTCCAA
1 GGGGATACTCCAACCCCGGTTTTATTTCT-AAAATATCGATTTTC-ATAATCGGGGATACTCCAA
* **
114867 TCCTATTATTTTCGA
64 CCCCGTTATTTTCGA
* * * * * * *
114882 GGGGAT-CTCCAACCGCGATTTTATTTCTAGAACATCGATTTTCCATAATCAAGGGATACTCTAG
1 GGGGATACTCCAACCCCGGTTTTATTTCTAAAATATCGATTTT-CATAATC-GGGGATACTCCAA
114946 CCCCGTT
64 CCCCGTT
114953 GTCATCTCCA
Statistics
Matches: 252, Mismatches: 47, Indels: 18
0.79 0.15 0.06
Matches are distributed among these distances:
78 41 0.16
79 210 0.83
80 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.17, T:0.33
Consensus pattern (78 bp):
GGGGATACTCCAACCCCGGTTTTATTTCTAAAATATCGATTTTCATAATCGGGGATACTCCAACC
CCGTTATTTTCGA
Found at i:116828 original size:21 final size:19
Alignment explanation
Indices: 116802--116854 Score: 61
Period size: 19 Copynumber: 2.7 Consensus size: 19
116792 TTCAATAATT
116802 TGTATCGATACAAACAGTAAA
1 TGTATCGATACAAA-AGT-AA
* * *
116823 TGTATCAATACATAAGTAC
1 TGTATCGATACAAAAGTAA
116842 TGTATCGATACAA
1 TGTATCGATACAA
116855 TATATTAATA
Statistics
Matches: 27, Mismatches: 5, Indels: 2
0.79 0.15 0.06
Matches are distributed among these distances:
19 12 0.44
20 3 0.11
21 12 0.44
ACGTcount: A:0.43, C:0.15, G:0.13, T:0.28
Consensus pattern (19 bp):
TGTATCGATACAAAAGTAA
Found at i:116991 original size:64 final size:64
Alignment explanation
Indices: 116914--117034 Score: 215
Period size: 64 Copynumber: 1.9 Consensus size: 64
116904 CATTATTCAA
* *
116914 TGTATCGATACATTGATCTTTGTATCGATACATTAGGAAATTTTACCTAGATGTATCCATACAT
1 TGTATCGATACATTGATCCTTGTATCGATACATTAGGAAATTTTACCCAGATGTATCCATACAT
*
116978 TGTATCGATACATTGATCCTTGTATCGATACATTAGGGAATTTTACCCAGATGTATC
1 TGTATCGATACATTGATCCTTGTATCGATACATTAGGAAATTTTACCCAGATGTATC
117035 GAGACATTAT
Statistics
Matches: 54, Mismatches: 3, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
64 54 1.00
ACGTcount: A:0.30, C:0.17, G:0.16, T:0.38
Consensus pattern (64 bp):
TGTATCGATACATTGATCCTTGTATCGATACATTAGGAAATTTTACCCAGATGTATCCATACAT
Found at i:120174 original size:13 final size:13
Alignment explanation
Indices: 120156--120181 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
120146 GGGTCGAGTG
120156 CAATGTATCGATA
1 CAATGTATCGATA
120169 CAATGTATCGATA
1 CAATGTATCGATA
120182 TAAAGCATAA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
CAATGTATCGATA
Found at i:121375 original size:159 final size:157
Alignment explanation
Indices: 120735--121870 Score: 423
Period size: 159 Copynumber: 7.2 Consensus size: 157
120725 TTTCCTTCAA
* * *
120735 ATCAAAGTTCATCCTTTAAATAAGACAAGCATCG-ATTCTCATAATAGTCTCCATTCTTTTAAAG
1 ATCAAAGTTCATCCCTTAAATAAGACAAGCAT-GAATTCTCATAACAATCTCCATTCTTTTAAAG
* * * * * *
120799 ATTGGGAAGCTAAAACGCAATCCCTTCTTTAGGATACATGACATTAATGCTTTGGTGTCACAAAA
65 ATTAGGAA-CT-AAACGCATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTCACAAGA
* * *
120864 AAAGCTTTTCTTTCTACAGTTTTTGAT-AG
128 AAAGCTTTTCTTTCCACCGTTTTTTATAAG
* * * * **
120893 AATCAAAGTTTATCTCC-TAAATAAGACAAACTTGAATACTCAT-ACTAATC-CCA-TCTTTTCC
1 -ATCAAAGTTCATC-CCTTAAATAAGACAAGCATGAATTCTCATAAC-AATCTCCATTCTTTTAA
* * *** * *
120954 ATATTAGGCACTGTAAA--CATAGTCTTCACATTAGGATACATGATATTGATGCTTTGGTTTCGC
63 AGATTAGGAAC--TAAACGCATTCCCTT--CATTAGGATACATGATATTGATGCTTTGGTGTCAC
* * * *
121017 AAGAAAGGC-TTTCTTCCCACCAATTTTTTTGTAA-
124 AAGAAAAGCTTTTCTTTCCACC--GTTTTTTATAAG
* * * ** * * ** * *
121051 AGTCTAAGTTCATGCCTCAAACGAGACAAACATGGATTCT-AGTAATGATCTTCATTCATTTT-G
1 A-TCAAAGTTCATCCCTTAAATAAGACAAGCATGAATTCTCA-TAACAATCTCCATTC-TTTTAA
* * * * * * * * ** * **
121114 TGATTAGGCACCATGACCACATTCTCC-TCATTAGGATAAATGATAGTGATGATTTTCTTTTGCA
63 AGATTAGG-AAC-TAAACGCATTC-CCTTCATTAGGATACATGATATTGATGCTTTGGTGTCACA
* * * * * *
121178 TGGAAATCTTTTATTTGC-CC-TATTTTCCT-TAAA
125 AGAAAAGCTTTTCTTTCCACCGT-TTTT--TATAAG
* *
121211 ATCAAAGTTCATCCCTTAAATAAGACAAGCATAAATTCTCGTAACAATCTCCATTCTTTTAAAGA
1 ATCAAAGTTCATCCCTTAAATAAGACAAGCATGAATTCTCATAACAATCTCCATTCTTTTAAAGA
* * *
121276 TTGGGAAGCTAAATCGCATTCCCTTCTTTAGGATACATGATATTGATGCTTTGGTGTCATAAGAA
66 TTAGGAA-CTAAA-CGCATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTCACAAGAA
121341 AAGCTTTTCTTTCCACCGTTTTTTATAAG
129 AAGCTTTTCTTTCCACCGTTTTTTATAAG
* ** * * * * * *
121370 TTCAAAGTTTGTCTCTTAAATAAGACAAGCATGAATACTCAT-ACTAATCTCAATTATTTTCAGG
1 ATCAAAGTTCATCCCTTAAATAAGACAAGCATGAATTCTCATAAC-AATCTCCATTCTTTTAAAG
* ** * * * * * * *
121434 ATTAGGCACCTTAAACAAAGT-CTTCTCCTTAGTATACATTATATTAATGCTTTGGTTTCACAAG
65 ATTAGG-AAC-TAAACGCATTCCCT-TCATTAGGATACATGATATTGATGCTTTGGTGTCACAAG
* *
121498 -AAAGGTTTT-TTT-CACTC-TAATTTTTGTAA-
127 AAAAGCTTTTCTTTCCAC-CGT--TTTTTATAAG
*** * * * ** * * ** * ** * **
121527 AGTCTGTGCTCGTGTCC-TAAAGGAGACAAACATGGATTCTGGTCATGATCTTCATTCATTTTGT
1 A-TCAAAGTTCAT-CCCTTAAATAAGACAAGCATGAATTCTCATAACAATCTCCATTC-TTTTAA
* * * * * * * ** *
121591 A-ATTAGGCACTATAAACACATTCTCC-TCATTAGGATAAATTACATTGAAGATTT--T-TTTCG
63 AGATTAGGAAC--TAAACGCATTC-CCTTCATTAGGATACATGATATTGATGCTTTGGTGTCACA
* * * * * *
121651 TGGAAATCTTTTCTTTGC-CC-TATTTTCCTTTCA-
125 AGAAAAGCTTTTCTTTCCACCGT-TTTT--TATAAG
** * * * ** *
121684 ATCAAAGTTCATCCCTTAAATAAGATGAGGATCG-ATTCTTATAACAGTCTCTGTTCTTTTGAAG
1 ATCAAAGTTCATCCCTTAAATAAGACAAGCAT-GAATTCTCATAACAATCTCCATTCTTTTAAAG
* * * * *
121748 ATTAAGAAGCTAAAACGCATTACCATCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGA
65 ATTAGGAA-CT-AAACGCATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTCACAAGA
* *
121813 AAAACTTTTCTTTCCACCATTTTTTAT-AG
128 AAAGCTTTTCTTTCCACCGTTTTTTATAAG
* *
121842 AATCAAAGTTTATCTCTTAAATAAGACAA
1 -ATCAAAGTTCATCCCTTAAATAAGACAA
121871 ACACAAATAC
Statistics
Matches: 699, Mismatches: 212, Indels: 132
0.67 0.20 0.13
Matches are distributed among these distances:
155 24 0.03
156 90 0.13
157 74 0.11
158 147 0.21
159 279 0.40
160 67 0.10
161 13 0.02
162 4 0.01
163 1 0.00
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.37
Consensus pattern (157 bp):
ATCAAAGTTCATCCCTTAAATAAGACAAGCATGAATTCTCATAACAATCTCCATTCTTTTAAAGA
TTAGGAACTAAACGCATTCCCTTCATTAGGATACATGATATTGATGCTTTGGTGTCACAAGAAAA
GCTTTTCTTTCCACCGTTTTTTATAAG
Found at i:121524 original size:476 final size:476
Alignment explanation
Indices: 120490--122855 Score: 2863
Period size: 473 Copynumber: 5.1 Consensus size: 476
120480 ATCCTAGCAT
* * *
120490 ACCATAAACATAGTATTCATCATTAGGATACACGATATTAATGCTTTGGTTTCGGAAGAAAGGCT
1 ACCATAAACATAGTCTTC-TCATTAGGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCT
* * * * * ** *
120555 TTCTACCCACCAATATTGGTAGAGTCTAAGTTCGTGCCTCAAATGAGGTAAACATGGATTTTAGT
65 TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGT
* * *
120620 AATGATTTTCATTCATTTTG-GAATTAGGCACCATAAACACATTCTCCTCATTAGGAAAAATGAT
130 AATGATCTTCATTCATTTTGTG-ATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
* * *
120684 ATTGATGATTTTCTTTTGCATGAAAATCTTTTC--TGCCCTATTTTCCTTCAAATCAAAGTTCAT
194 ATTGAAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAT
* *
120747 CCTTTAAATAAGACAAGCATCGATTCTCATAATAGTCTCCATTCTTTTAAAGATTGGGAAGCTAA
259 CCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAA
* * *
120812 AACGCAATCCCTTCTTTAGGATACATGACATTAATGCTTTGGTGTCACAAAAAAAGCTTTTCTTT
324 AACGCATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTT
* * * * *
120877 CTACAGTTTTTGATAGAATCAAAGTTTATCTCCTAAATAAGACAAACTTGAATACTCATACTAAT
389 CCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAAT
*
120942 -CCCA-TCTTTTCCA-TATTAGGC
454 CCCCATTCTTTT-CAGGATTAGGC
** * *
120963 ACTGTAAACATAGTCTTCACATTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCTT
* * *
121028 TCTTCCCACCAATTTTTTTGTAAAGTCTAAGTTCATGCCTCAAACGAGACAAACATGGATTCTAG
66 TTTTCCCACCAA--TTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAG
* * *
121093 TAATGATCTTCATTCATTTTGTGATTAGGCACCATGACCACATTCTCCTCATTAGGATAAATGAT
129 TAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGAT
* * *
121158 AGTGATGATTTTCTTTTGCATGGAAATCTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTCAT
194 ATTGAAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCAT
** * *
121223 CCCTTAAATAAGACAAGCATAAATTCTCGTAACAATCTCCATTCTTTTAAAGATTGGGAAGCTAA
259 CCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAA
* * *
121288 ATCGCATTCCCTTCTTTAGGATACATGATATTGATGCTTTGGTGTCATAAGAAAAGCTTTTCTTT
324 AACGCATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTT
* * *
121353 CCACCGTTTTTTATA-AGTTCAAAGTTTGTCTCTTAAATAAGACAAGCATGAATACTCATACTAA
389 CCACCGTTTTTTATAGA-ATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAA
* * *
121417 TCTCAATTATTTTCAGGATTAGGC
453 TCCCCATTCTTTTCAGGATTAGGC
* * * * * * *
121441 ACCTTAAACAAAGTCTTCTCCTTAGTATACATTATATTAATGCTTTGGTTTCACAAGAAAGGTTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCTT
* * * ** * * *
121506 TTTTCACTCTAATTTTTGTAAAGTCTGTGCTCGTGTCCT-AAAGGAGACAAACATGGATTCTGGT
66 TTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTG-CCTCAAATGAGACAAACATGGATTCTAGT
* * * *
121570 CATGATCTTCATTCATTTTGTAATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATTACA
130 AATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATA
* **
121635 TTGAAGA-TTT-TTTT-CGTGGAAATCTTTTCTTTGCCCTATTTTCCTTTCAATCAAAGTTCATC
195 TTGAAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATC
** * * ** * **
121697 CCTTAAATAAGATGAGGATCGATTCTTATAACAGTCTCTGTTCTTTTGAAGATTAAGAAGCTAAA
260 CCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAA
* * * * *
121762 ACGCATTACCATCATTAGGATACAAGACATTGATGCTTTGGTGTCACAAGAAAAACTTTTCTTTC
325 ACGCATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTC
* **
121827 CACCATTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACACAAATACTCATACTAATC
390 CACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATC
* * *
121892 CCCTTTCTTTTCAAGATTTGGC
455 CCCATTCTTTTCAGGATTAGGC
* * * *
121914 ACCATAAACATAGTCTTCACATTAGGATACACGATATTAATGTTTTGGTTTCGCAAGAAAGTCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCTT
* * * *
121979 TTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTTTTGTA
66 TTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* *
122044 ATGATTTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATTATAT
131 ATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
* * * *
122109 TAAAGATTTT-TTTTCCATGGAAATCTTTTCTTTGCTCTATTTTCCTAAAAATCAAAGTTCATCC
196 TGAAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCC
* * **
122173 CTTAAATAAGACAAGCATTGACTCTCATAACAGTCTCCATTCTTTTCTAGATT-GG--G-----A
261 CTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAA
* * *
122230 ---A----C--C--------A-A--A-A-TGATGCTTTGGTGCCGCAAGAAAAGCTTTTCTTTTC
326 CGCATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCC
* * * * * *
122273 ACCATTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATGAATACTCATACTAATCC
391 ACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCC
*
122338 CTATTCTTTTCAGGATTAGGC
456 CCATTCTTTTCAGGATTAGGC
* * * * * *
122359 ACCATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGTAGGAAAAGCTT
1 ACCATAAACATAGTCTTCTCATTAGGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCTT
* *
122424 TTTTCCCACCAATTTTTGGAAAGTCTAAGTTCGTGCCACAAATGAGACAAACATGGATTCTAGTA
66 TTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
* *
122489 AAGATCTTCATTCATTTTGTGATTAGGTACTATAAACACATTCTCCTCATTAAGG-----TGATA
131 ATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT-AGGATAAATGATA
* * **
122549 TTGAAGATTTTCTTCTGCATGGAAATTTTTTCTTTATCCTATTTTCCTTAAAATCAAAGTTCATC
195 TTGAAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATC
* * * * * * * *
122614 CATTAAATAAGACAAACTTCAATTCTCGTAACAGTCACCATTCTTTTTGAA-ATTGGG-AGCCAA
260 CCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC-TTTTAAAGATTGGGAAG-CTA
* * * * *
122677 AAACCCCTTCACCTT-TTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGGAAAGCTTTTCT
323 AAACGCATTC-CCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCT
* *
122741 TTCCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACTTGAATACTCGTACTA
387 TTCCACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTA
*
122806 ATCCCCATTTTTCTTC-GGATTAGGC
452 ATCCCCATTCTT-TTCAGGATTAGGC
* *
122831 TCCATAAATATAGTCTTCTCATTAG
1 ACCATAAACATAGTCTTCTCATTAG
122856 TGTAGACACC
Statistics
Matches: 1619, Mismatches: 225, Indels: 99
0.83 0.12 0.05
Matches are distributed among these distances:
441 14 0.01
442 84 0.05
443 7 0.00
444 1 0.00
445 269 0.17
446 4 0.00
447 1 0.00
449 1 0.00
450 2 0.00
458 2 0.00
460 1 0.00
464 1 0.00
467 2 0.00
468 1 0.00
470 1 0.00
471 1 0.00
472 186 0.11
473 415 0.26
474 145 0.09
475 92 0.06
476 307 0.19
477 7 0.00
478 75 0.05
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (476 bp):
ACCATAAACATAGTCTTCTCATTAGGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCTT
TTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTA
ATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATAT
TGAAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCC
CTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAGCTAAAA
CGCATTCCCTTCTTTAGGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCC
ACCGTTTTTTATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAATACTCATACTAATCC
CCATTCTTTTCAGGATTAGGC
Found at i:126495 original size:28 final size:29
Alignment explanation
Indices: 126463--126517 Score: 76
Period size: 29 Copynumber: 1.9 Consensus size: 29
126453 TGTCATCTTA
*
126463 GGCCAAGAC-CCTTTTATCAAGAAATGTT
1 GGCCAAGACACCATTTATCAAGAAATGTT
**
126491 GGCCAATTCACCATTTATCAAGAAATG
1 GGCCAAGACACCATTTATCAAGAAATG
126518 GTTGTCAAGA
Statistics
Matches: 23, Mismatches: 3, Indels: 1
0.85 0.11 0.04
Matches are distributed among these distances:
28 7 0.30
29 16 0.70
ACGTcount: A:0.35, C:0.22, G:0.16, T:0.27
Consensus pattern (29 bp):
GGCCAAGACACCATTTATCAAGAAATGTT
Found at i:126645 original size:28 final size:28
Alignment explanation
Indices: 126605--126962 Score: 229
Period size: 28 Copynumber: 12.3 Consensus size: 28
126595 GACCTCTTTT
*
126605 CAAAGCCTACAAGTTAGTGGCATCCTTC
1 CAAAGCCCACAAGTTAGTGGCATCCTTC
* * * *
126633 CAAAGCCCACAAGTCAATGGCATCTTTT
1 CAAAGCCCACAAGTTAGTGGCATCCTTC
* *
126661 CAAAGCCCACAAGTTAGTGGCAGCCCTTTT
1 CAAAGCCCACAAGTTAGTGGCA-TCC-TTC
* * * *
126691 CAAAGCTCACATGTTAGTGGTATCCTTT
1 CAAAGCCCACAAGTTAGTGGCATCCTTC
*
126719 CAAAGCCCACAAGTCAGTGGCATCCTTC
1 CAAAGCCCACAAGTTAGTGGCATCCTTC
* * * *
126747 TCAAAGCCCACAAGTCAATGGCATCATTT
1 -CAAAGCCCACAAGTTAGTGGCATCCTTC
** * * *
126776 CAAAGCCCACACAAGTCGGTGGAAACCTCTTT
1 CAAAG-CC-CACAAGTTAGTGG-CATC-CTTC
* *
126808 CAAAGCCTACAAGTT-GTGGCACCCTT-
1 CAAAGCCCACAAGTTAGTGGCATCCTTC
* * *
126834 -AAAGGCCACACAAGTTGGTGGCAACCGCTC
1 CAAA-GCC-CACAAGTTAGTGGCATCC-TTC
* * *
126864 TCAAAGCCCACAAATCAGTGGTATCC-TC
1 -CAAAGCCCACAAGTTAGTGGCATCCTTC
* *
126892 TTAAAGCCCACAAGTTAGTGGCAACCCTTC
1 -CAAAGCCCACAAGTTAGTGGC-ATCCTTC
* * *
126922 CAAAGCCCAGATAAGTTGGTGGCAACCTTC
1 CAAAGCCC--ACAAGTTAGTGGCATCCTTC
126952 TCTAAAGCCCA
1 -C-AAAGCCCA
126963 TACAAGTTGG
Statistics
Matches: 264, Mismatches: 46, Indels: 38
0.76 0.13 0.11
Matches are distributed among these distances:
25 3 0.01
26 3 0.01
27 10 0.04
28 105 0.40
29 45 0.17
30 61 0.23
31 19 0.07
32 18 0.07
ACGTcount: A:0.30, C:0.30, G:0.18, T:0.22
Consensus pattern (28 bp):
CAAAGCCCACAAGTTAGTGGCATCCTTC
Found at i:126717 original size:86 final size:87
Alignment explanation
Indices: 126600--126761 Score: 256
Period size: 86 Copynumber: 1.9 Consensus size: 87
126590 AGTACGACCT
*
126600 CTTTTCAAAGCCTACAAGTTAGTGGCATCCTTCCAAAGCCCACAAGTCAATGGCAT-CTTTTCAA
1 CTTTTCAAAGCCTACAAGTTAGTGGCATCCTTCCAAAGCCCACAAGTCAATGGCATCCTTCTCAA
126664 AGCCCACAAGTTAGTGGCAGCC
66 AGCCCACAAGTTAGTGGCAGCC
* * * *
126686 CTTTTCAAAG-CTCACATGTTAGTGGTATCCTTTCAAAGCCCACAAGTCAGTGGCATCCTTCTCA
1 CTTTTCAAAGCCT-ACAAGTTAGTGGCATCCTTCCAAAGCCCACAAGTCAATGGCATCCTTCTCA
126750 AAGCCCACAAGT
65 AAGCCCACAAGT
126762 CAATGGCATC
Statistics
Matches: 69, Mismatches: 5, Indels: 3
0.90 0.06 0.04
Matches are distributed among these distances:
85 2 0.03
86 49 0.71
87 18 0.26
ACGTcount: A:0.28, C:0.29, G:0.17, T:0.26
Consensus pattern (87 bp):
CTTTTCAAAGCCTACAAGTTAGTGGCATCCTTCCAAAGCCCACAAGTCAATGGCATCCTTCTCAA
AGCCCACAAGTTAGTGGCAGCC
Found at i:126783 original size:57 final size:57
Alignment explanation
Indices: 126602--126930 Score: 310
Period size: 57 Copynumber: 5.7 Consensus size: 57
126592 TACGACCTCT
* * * *
126602 TTTCAAAGCCTACAAGTTAGTGGCATCCTTC-CAAAGCCCACAAGTCAATGGCATCT
1 TTTCAAAGCCCACAAGTTAGTGGCAACCTTCTCAAAGCCCACAAGTCAGTGGCATCC
* * * * * *
126658 TTTCAAAGCCCACAAGTTAGTGGCAGCCCTTTTCAAAGCTCACATGTTAGTGGTATCC
1 TTTCAAAGCCCACAAGTTAGTGGCA-ACCTTCTCAAAGCCCACAAGTCAGTGGCATCC
* * * *
126716 TTTCAAAGCCCACAAGTCAGTGGCATCCTTCTCAAAGCCCACAAGTCAATGGCATCA
1 TTTCAAAGCCCACAAGTTAGTGGCAACCTTCTCAAAGCCCACAAGTCAGTGGCATCC
** * * * *
126773 TTTCAAAGCCCACACAAGTCGGTGGAAACCTCTTTCAAAGCCTACAAGT-TGTGGCA-CC
1 TTTCAAAG-CC-CACAAGTTAGTGGCAACCT-TCTCAAAGCCCACAAGTCAGTGGCATCC
* * * * *
126831 CTT-AAAGGCCACACAAGTTGGTGGCAACCGCTCTCAAAGCCCACAAATCAGTGGTATCC
1 TTTCAAA-GCC-CACAAGTTAGTGGCAACC-TTCTCAAAGCCCACAAGTCAGTGGCATCC
126890 TCTT-AAAGCCCACAAGTTAGTGGCAACCCTTC-CAAAGCCCA
1 T-TTCAAAGCCCACAAGTTAGTGGCAA-CCTTCTCAAAGCCCA
126931 GATAAGTTGG
Statistics
Matches: 224, Mismatches: 38, Indels: 21
0.79 0.13 0.07
Matches are distributed among these distances:
56 24 0.11
57 81 0.36
58 71 0.32
59 28 0.12
60 20 0.09
ACGTcount: A:0.30, C:0.30, G:0.18, T:0.23
Consensus pattern (57 bp):
TTTCAAAGCCCACAAGTTAGTGGCAACCTTCTCAAAGCCCACAAGTCAGTGGCATCC
Found at i:126814 original size:32 final size:32
Alignment explanation
Indices: 126773--126981 Score: 151
Period size: 32 Copynumber: 7.0 Consensus size: 32
126763 AATGGCATCA
* *
126773 TTTCAAAGCCCACACAAGTCGGTGGAAACCTC
1 TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
*
126805 TTTCAAAG-CC-TACAAGTT-GTGGC-ACC-C
1 TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
* *
126832 -TT-AAAGGCCACACAAGTTGGTGGCAACCGC
1 TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
* ** * *
126862 TCTCAAAGCCCACA-AA-TCAGTGGTATCCTC
1 TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
*
126892 -TT-AAAG-CC-CACAAGTTAGTGGCAACC-C
1 TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
* * *
126919 TTCCAAAGCCCAGATAAGTTGGTGGCAACCT-
1 TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
* * *
126950 TCTCTAAAGCCCATACAAGTTGGTGACAACCT
1 TTTC-AAAGCCCACACAAGTTGGTGGCAACCT
126982 TTCTAAACTT
Statistics
Matches: 138, Mismatches: 24, Indels: 30
0.72 0.12 0.16
Matches are distributed among these distances:
25 4 0.03
26 6 0.04
27 13 0.09
28 22 0.16
29 12 0.09
30 18 0.13
31 22 0.16
32 41 0.30
ACGTcount: A:0.30, C:0.29, G:0.19, T:0.22
Consensus pattern (32 bp):
TTTCAAAGCCCACACAAGTTGGTGGCAACCTC
Found at i:126868 original size:89 final size:89
Alignment explanation
Indices: 126775--126974 Score: 230
Period size: 89 Copynumber: 2.2 Consensus size: 89
126765 TGGCATCATT
*
126775 TCAAAGCCCACACAAGTCGGTGGAAACCTCTTTCAAAGCCTACAAGTT-GTGGC-ACCCTT-AAA
1 TCAAAGCCCACACAAGTCGGTGGAAACCTC-TT-AAAGCCCACAAGTTAGTGGCAACCCTTCAAA
*
126837 GGCCACACAAGTTGGTGGCAACCGCTC
64 GCCCACACAAGTTGGTGGCAACC-CTC
* * *
126864 TCAAAGCCCACA-AA-TCAGTGGTATCCTCTTAAAGCCCACAAGTTAGTGGCAACCCTTCCAAAG
1 TCAAAGCCCACACAAGTCGGTGGAAACCTCTTAAAGCCCACAAGTTAGTGGCAACCCTT-CAAAG
* * *
126927 CCCAGATAAGTTGGTGGCAACCTTC
65 CCCACACAAGTTGGTGGCAACCCTC
* *
126952 TCTAAAGCCCATACAAGTTGGTG
1 TC-AAAGCCCACACAAGTCGGTG
126975 ACAACCTTTC
Statistics
Matches: 93, Mismatches: 11, Indels: 12
0.80 0.09 0.10
Matches are distributed among these distances:
85 13 0.14
86 7 0.08
87 17 0.18
88 6 0.06
89 44 0.47
90 2 0.02
91 4 0.04
ACGTcount: A:0.30, C:0.29, G:0.20, T:0.21
Consensus pattern (89 bp):
TCAAAGCCCACACAAGTCGGTGGAAACCTCTTAAAGCCCACAAGTTAGTGGCAACCCTTCAAAGC
CCACACAAGTTGGTGGCAACCCTC
Found at i:128578 original size:20 final size:20
Alignment explanation
Indices: 128553--128606 Score: 76
Period size: 20 Copynumber: 2.7 Consensus size: 20
128543 CCGCCACTGT
128553 TTGTATCGATACAT-A-GGACA
1 TTGTATCGATACATGATGG--A
128573 TTGTATCGATACATGATGGA
1 TTGTATCGATACATGATGGA
128593 TTGTATCGATACAT
1 TTGTATCGATACAT
128607 TGCTTGTAAC
Statistics
Matches: 32, Mismatches: 0, Indels: 4
0.89 0.00 0.11
Matches are distributed among these distances:
20 29 0.91
21 1 0.03
22 2 0.06
ACGTcount: A:0.31, C:0.13, G:0.20, T:0.35
Consensus pattern (20 bp):
TTGTATCGATACATGATGGA
Found at i:130319 original size:474 final size:475
Alignment explanation
Indices: 129347--130587 Score: 1507
Period size: 474 Copynumber: 2.6 Consensus size: 475
129337 GAGCTTTCAC
* *
129347 AAAGGCTTTCTTCCCACCAATTTTGGTAAAGTCTAAGTCCGTGCCTTAAATGAGACAAACATGGA
1 AAAGGCTTTCTTCCCACCAATTTT-GTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * * * **
129412 TTCTAGTAATGTTCTTCATTCATTTTGTGATTAGGTACTATAAACACAATCTCCTTTTTAGGATA
65 TTCTAGTAATGATCTTCATTTATTTTGTGTTTA-GAACTATAAACACATTCTCCTCATTAGGATA
* * * *
129477 AATGATATTGGTGATTTTCTTTTCCATGGAAACCTTTTT-TTAGTCCTATTTTCCTTAAAATCAA
129 AATGATATTGATGATTTTCTTTTGCATGGAAA-TTTTTTCTTTGTCCTATTTTCCTTAAAATCAA
* ** * * * **
129541 AGTTCATCCCTTAAACT-AGACTTGCATCAATTCTCGTAACAATCTCCATTCTTTTCGAGATTAA
193 AGTTCATCCC-TAAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGG
* * * *
129605 AAACCAAAAACA-ACTTCATTTCATTAGGAGACAAGACATTGATGCTTTGCTGTTGCAAGAAAAG
257 GAACCAAAAACACACTTCACTTCATTAGGAGACAAGACATTGATGCGTCGCTGTTGCAAGAAAAG
* * * *
129669 CTTTTCTTTCCACAATTTTTGATAGAGTCAAAGTTTATCTCTTAAATAAGACAAACTTGAATACT
322 CTTTTCTTTCCACAATTTTTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAAAACT
** *** * **
129734 CATATGAATCCCCATTCTTTTTTTGATTAGGTACCATAAACACAGTCTTCTCATTAGGATACATT
387 CATACAAATCCCCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATTAGGATACAAG
129799 ATATTGATGCTTTGGTTTCACAAA
452 ATATTGATGCTTTGGTTTCACAAA
* *
129823 AAAGGATTTCTTCCCACCAATTTCTATAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
1 AAAGGCTTTCTTCCCACCAATTT-TGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * ** *
129888 TTCTAGTAACGATCTTCATTTATTTTGTGTTTAGACACCATAAACGCATTCAACTCATTAGGAAA
65 TTCTAGTAATGATCTTCATTTATTTTGTGTTTAGA-ACTATAAACACATTCTCCTCATTAGGATA
* **
129953 AATGATATTGATGATTTT-TTTAGCATGGAAATTTTTTCTTTCCCCTATTTTCCTTAAAATCAAA
129 AATGATATTGATGATTTTCTTTTGCATGGAAATTTTTTCTTTGTCCTATTTTCCTTAAAATCAAA
* * * *
130017 GTTCATCACAAAAATAAGACAAGCATTGATTCTCGTAACAGTCTTCATTCTTTT-AACGATTGGG
194 GTTCATCCCTAAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAA-GATTGGG
* * * ** * *
130081 AAGCTAAAACACA-TTCCCTT-ATTTAGGATCCATGACATTGATGCGTCGGTGTTGCAAGAAAAG
258 AACCAAAAACACACTTCACTTCA-TTAGGAGACAAGACATTGATGCGTCGCTGTTGCAAGAAAAG
* * * * * *
130144 -TTTTTTTTCCATC-GTTTTTAATGGAATCAAAGTTTGTCTCTTAAATATGACAAACATGAAAAG
322 CTTTTCTTTCCA-CAATTTTTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAAAAC
* * * *
130207 TCATACAAATCCCTATTCTTTTCAGGATTAGGCACTATAAACATAGTCTTCTCATTAGGATCCAA
386 TCATACAAATCCCCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATTAGGATACAA
* *
130272 GATATTGATGCTTTGGTTTTACAAG
451 GATATTGATGCTTTGGTTTCACAAA
* * * *
130297 AAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTTGTGCTTCAAAAGAGACAAACATGGA
1 AAAGGCTTTCTTCCCACCAA-TTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* ** *
130362 TTCTACTAATGATCTTC-TTTCATTTTGTGATTCGGAATTATAAACACATTCTCCTCATTAGGAT
65 TTCTAGTAATGATCTTCATTT-ATTTTGTG-TTTAGAACTATAAACACATTCTCCTCATTAGGAT
*
130426 AAATGATATTGATGATTTTCTTTTGCATGGAAATATTTTCTTTGTCCTATTTTCCTTAAAATCAA
128 AAATGATATTGATGATTTTCTTTTGCATGGAAATTTTTTCTTTGTCCTATTTTCCTTAAAATCAA
* * * * *
130491 AGCTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGCCTCCATTCGTTTTGAA-ATTGG
193 AGTTCATCCCTAAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTC-TTTTCAAGATTGG
*
130555 GAACCAAAAACAC-CTTCACTTCATTCGGAGACA
257 GAACCAAAAACACACTTCACTTCATTAGGAGACA
130588 TTGATGCTTT
Statistics
Matches: 644, Mismatches: 105, Indels: 33
0.82 0.13 0.04
Matches are distributed among these distances:
473 3 0.00
474 257 0.40
475 249 0.39
476 132 0.20
477 3 0.00
ACGTcount: A:0.32, C:0.19, G:0.13, T:0.36
Consensus pattern (475 bp):
AAAGGCTTTCTTCCCACCAATTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
TCTAGTAATGATCTTCATTTATTTTGTGTTTAGAACTATAAACACATTCTCCTCATTAGGATAAA
TGATATTGATGATTTTCTTTTGCATGGAAATTTTTTCTTTGTCCTATTTTCCTTAAAATCAAAGT
TCATCCCTAAAATAAGACAAGCATCGATTCTCGTAACAGTCTCCATTCTTTTCAAGATTGGGAAC
CAAAAACACACTTCACTTCATTAGGAGACAAGACATTGATGCGTCGCTGTTGCAAGAAAAGCTTT
TCTTTCCACAATTTTTAATAGAATCAAAGTTTATCTCTTAAATAAGACAAACATGAAAACTCATA
CAAATCCCCATTCTTTTCAGGATTAGGCACCATAAACACAGTCTTCTCATTAGGATACAAGATAT
TGATGCTTTGGTTTCACAAA
Found at i:130686 original size:312 final size:312
Alignment explanation
Indices: 130275--130869 Score: 809
Period size: 312 Copynumber: 1.9 Consensus size: 312
130265 GATCCAAGAT
* * * * * * *
130275 ATTGATGCTTTGGTTTTACAAGAAAGGCTTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTTGTG
1 ATTGATGCTTTGGTGTCACAAGAAAGCCTTTTTTCCCACAAATTTCTGCAAAGTCTAAGTTCGTG
* * * * *
130340 CTTCAAAAGAGACAAACATGGATTCTACTAATGATCTTCTTTCATTTTGTGATTCGGAATTATAA
66 CCTCAAAAGAGACAAACATGGATGCTACTAATGATCTTCATTCATTTTGTCATTCGGAACTATAA
* * *
130405 ACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAATATTTTCTTTG
131 ACACATTCTCCTCATCAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAATATTTTCATTG
* **
130470 -TCCTATTTTCCTTAAAATCAAAGCTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGC
196 CT-CTATTTTCCTTAAAATCAAAGCTCATCACAGAAATAAGACAAGCATCGATTCTCATAACAGC
*
130534 CTCCATTCGTTTTGAA-ATTGGGAACCAAAAACACCTTCACTTCATTCGGAGAC
260 CTCCATTC-TTTTAAAGATTGGGAACCAAAAACACCTTCACTTCATTCGGAGAC
** *
130587 ATTGATGCTTTGGTGTCGTAAGAAAGCCTTTTTTCCCTCAAATTTCTGCAAAGTCTAAGTTCGTG
1 ATTGATGCTTTGGTGTCACAAGAAAGCCTTTTTTCCCACAAATTTCTGCAAAGTCTAAGTTCGTG
* * * * *
130652 CC-CTAAATGAGACAAACATGGATGCTAGTAATGATCTTCATTCATTTTGTCTTTGGGCACTATA
66 CCTC-AAAAGAGACAAACATGGATGCTACTAATGATCTTCATTCATTTTGTCATTCGGAACTATA
* * * * *
130716 AACATATTCTCTTTATCAGGAAAAATGATATTGATGATTTTCTTTTGTATGTAAATATTTTCATT
130 AACACATTCTCCTCATCAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAATATTTTCATT
** * *
130781 GCTCTATTTTCCTTAAAATCAAATTTCATCACAGAAATAAGACAAGCATCGATTCTCATAATAGT
195 GCTCTATTTTCCTTAAAATCAAAGCTCATCACAGAAATAAGACAAGCATCGATTCTCATAACAGC
*
130846 TTCCATTCTTTTAAAGATTGGGAA
260 CTCCATTCTTTTAAAGATTGGGAA
130870 GCTAAAAAGC
Statistics
Matches: 243, Mismatches: 37, Indels: 6
0.85 0.13 0.02
Matches are distributed among these distances:
311 7 0.03
312 235 0.97
313 1 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.38
Consensus pattern (312 bp):
ATTGATGCTTTGGTGTCACAAGAAAGCCTTTTTTCCCACAAATTTCTGCAAAGTCTAAGTTCGTG
CCTCAAAAGAGACAAACATGGATGCTACTAATGATCTTCATTCATTTTGTCATTCGGAACTATAA
ACACATTCTCCTCATCAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAATATTTTCATTG
CTCTATTTTCCTTAAAATCAAAGCTCATCACAGAAATAAGACAAGCATCGATTCTCATAACAGCC
TCCATTCTTTTAAAGATTGGGAACCAAAAACACCTTCACTTCATTCGGAGAC
Found at i:132971 original size:316 final size:317
Alignment explanation
Indices: 132442--133053 Score: 847
Period size: 316 Copynumber: 1.9 Consensus size: 317
132432 TTGTAAAATT
* *
132442 TAAGTTCGTGTCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
1 TAAGTTCGTGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
* * * * *
132507 GGCACTATCAACACTTTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTGCATGGAAAT
66 GGCACCATAAACACATTCTCCTCATTAGGAAAAATGATATTAATGATTTTCTTTTGCATGGAAAT
* * ** *
132572 ATTTTCTTTGTCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATTGATTCT
131 ATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACAGAAATAAGACAAGCATCGATTCT
*
132637 CACAACAGTGCTCATTCTTTTCA-AGATTGGGAATCGAAAACACCTTCAC-TTCATTAGGAGACA
196 CACAACAGTGCTCATTCTTTT-AGAGATTGGGAAGC-AAAACACCTTC-CTTTCATTAGGAGACA
*
132700 TGACATTAATGCTTTGGTGTCGCAAG-AAAGCCTTTCTTCCCTTAAATTTCTTCAAAGTC
258 TGACATTAATGCTTTGGTGTCCCAAGAAAAGCCTTTCTTCCCTTAAATTTCTTCAAAGTC
* *
132759 TAAGTTCGTGCCTCAAATGAGATAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTG-TTA
1 TAAGTTCGTGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
* *
132823 GGCACCATAAACACATTCTCCTTATTAGGAAAAATGATATTAATGATTTTCTTTTGCATGTAAAT
66 GGCACCATAAACACATTCTCCTCATTAGGAAAAATGATATTAATGATTTTCTTTTGCATGGAAAT
* * *
132888 CTTTTCTTTGCCCTGTTTTCCTTAAAATCAAATTTCATCACAGAAATAAGACAAGCATCGATTCT
131 ATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACAGAAATAAGACAAGCATCGATTCT
* ** * * ** * * * *
132953 CATAGTAGT-TTCCATTCTTTTAGAGATTGGGAAGCTAAATGCGTTCCTTTCTTTAGGATACTTG
196 CACAACAGTGCT-CATTCTTTTAGAGATTGGGAAGCAAAACACCTTCCTTTCATTAGGAGACATG
* *
133017 ACATTGATGCTTTGGTGTCCCAAGAAAAGCTTTTCTT
260 ACATTAATGCTTTGGTGTCCCAAGAAAAGCCTTTCTT
133054 TCCACCGTTT
Statistics
Matches: 257, Mismatches: 34, Indels: 9
0.86 0.11 0.03
Matches are distributed among these distances:
314 1 0.00
315 44 0.17
316 155 0.60
317 57 0.22
ACGTcount: A:0.30, C:0.18, G:0.15, T:0.37
Consensus pattern (317 bp):
TAAGTTCGTGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
GGCACCATAAACACATTCTCCTCATTAGGAAAAATGATATTAATGATTTTCTTTTGCATGGAAAT
ATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCACAGAAATAAGACAAGCATCGATTCT
CACAACAGTGCTCATTCTTTTAGAGATTGGGAAGCAAAACACCTTCCTTTCATTAGGAGACATGA
CATTAATGCTTTGGTGTCCCAAGAAAAGCCTTTCTTCCCTTAAATTTCTTCAAAGTC
Found at i:133952 original size:411 final size:411
Alignment explanation
Indices: 133176--133970 Score: 1003
Period size: 411 Copynumber: 1.9 Consensus size: 411
133166 AGGATACACA
* *
133176 ATATTGATGCTTTAGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTTGTAAAGCCTAAGTTCG
1 ATATTGATGCTTTAGTTTTGCAAGAAAGACTTTCTTCCCACCAATTTGTGTAAAGCCTAAGTTCG
* * * *
133241 CGCCTCAAATGAGACAAACATGGATTCTAGTAATGATTTTCATTCATTTTTTCATTAGGCACCGT
66 CGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTCATTTTGTCATTAGGCACCAT
* *
133306 AAACACATTCTCCTCATTAGGAAAAATGATATTGATGATTTTCTTCTGCATGGAAATCTTTTATT
131 AAACACATTCTCCTCATTAGGAAAAATGATATTGATGATTTTCTTCTGCATAGAAATATTTTATT
* * *
133371 TGCCCTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGATAGGCATCAATTCTCCTAATAG
196 TGCCCTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAATAG
* * * *
133436 TCTCCATTCTTTTAAAGATTAGGAAACTTAAACGCATTCCTTTCTTTAGGATGCATGATATCAAT
261 TCTCCATTCTTTTAAAGATTAGGAAACTAAAACACATTCCTTTCATTAGGATGCATGAAATCAAT
* * *
133501 GCTTTTGTGTCGTAAGAAAAGCTTTTGTTTCCACCGTTTTTGATAGAATCATA-GTTTGTTTGTT
326 GCTTTTGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCA-AGGTTTGTTTGTT
133565 AGTCTTCTCATTAGGATCCATG
390 AGTCTTCTCATTAGGATCCATG
* * * * *
133587 ATATTTATGCTTTGGTTTTGCAAGAAAGACTTTTTTCCCATCAATTTGTGTAAAGTCTAAGTTCA
1 ATATTGATGCTTTAGTTTTGCAAGAAAGACTTTCTTCCCACCAATTTGTGTAAAGCCTAAGTTC-
* * * * *
133652 TC-CCTCAAAAGAGGCAAACATGGATTCTAGTAATGCTATTCATTCATTTTGTGATTAGGCACTA
65 GCGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTCATTTTGTCATTAGGCACCA
** ** * * * * * *
133716 TAAATGCATTCTTTTTATTAGGATAAATGATATTGATGATTTTTTTTTGTATAGAAATATTTTCT
130 TAAACACATTCTCCTCATTAGGAAAAATGATATTGATGATTTTCTTCTGCATAGAAATATTTTAT
* * * *
133781 TTGTCCTATTTTTCTTAAAATCAAAGTTCA-CCACTTAAATAAGACAAGCATCGATTCTCATAAT
195 TTGCCCTATTTTCCTCAAAATCAAAGTTCATCC-CTTAAATAAGACAAGCATCAATTCTCATAAT
* * ** *
133845 AGTCTTCGTTCTTTTCGAGATTAGG-AACTAAAAACACCTTCAC-TTCATTAGGA-GACATGACA
259 AGTCTCCATTCTTTTAAAGATTAGGAAACT-AAAACACATTC-CTTTCATTAGGATG-CATGA-A
* * * *
133907 AT-GATG-TTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTTTTGCCAGAATCAAGGTTTG
320 ATCAATGCTTTT-GTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAGGTTTG
133970 T
384 T
133971 CTCTTAAGTA
Statistics
Matches: 325, Mismatches: 51, Indels: 16
0.83 0.13 0.04
Matches are distributed among these distances:
410 12 0.04
411 309 0.95
412 4 0.01
ACGTcount: A:0.29, C:0.17, G:0.15, T:0.39
Consensus pattern (411 bp):
ATATTGATGCTTTAGTTTTGCAAGAAAGACTTTCTTCCCACCAATTTGTGTAAAGCCTAAGTTCG
CGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTCATTTTGTCATTAGGCACCAT
AAACACATTCTCCTCATTAGGAAAAATGATATTGATGATTTTCTTCTGCATAGAAATATTTTATT
TGCCCTATTTTCCTCAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAATAG
TCTCCATTCTTTTAAAGATTAGGAAACTAAAACACATTCCTTTCATTAGGATGCATGAAATCAAT
GCTTTTGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGACAGAATCAAGGTTTGTTTGTTA
GTCTTCTCATTAGGATCCATG
Found at i:134269 original size:887 final size:885
Alignment explanation
Indices: 132687--134446 Score: 2246
Period size: 887 Copynumber: 2.0 Consensus size: 885
132677 CACCTTCACT
* *
132687 TCATTAGGAGACATGACATTAATGCTTTGGTGTCGCAAGAAAGCCTTTCTTCCCTTAAATTTCTT
1 TCATTAGGAGACATGACATTAATGCTTTGGTGTCGCAAGAAAGACTTTCTTCCCATAAATTTCTT
* * * * *
132752 CAAAGTCTAAGTTCGTGCCTCAAATGAGATAAACATGGATTCTAGTAATGATCTTCATTCATTTT
66 CAAAGTCTAAGTTCATCCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTCATTTT
132817 GTGTTAGGCACCATAAACACATTCTCCTTATTAGGAAAAATGATATTAATGATTTTCTTTTGCAT
131 GTGTTAGGCACCATAAACACATTCTCCTTATTAGGAAAAATGATATTAATGATTTTCTTTTGCAT
* * * *
132882 GTAAATCTTTTCTTTGCCCTGTTTTCCTTAAAATCAAATTTCATCACAGAAATAAGACAAGCATC
196 GTAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCACCACAGAAATAAGACAAGCATC
* * ** * * *
132947 GATTCTCATAGTAGTTTCCATTCTTTTAGAGATTGGGAAGCTAAATGCGTTCCTTTCTTTAGGAT
261 GATTCTCATAATAGTTTCCATTCTTTTAGAGATTAGGAAGCTAAACACCTTCCTTTCATTAGGAG
* * * * *
133012 ACTTGACATTGATGCTTTGGTGTCCCAAGAAAAGCTTTTCTTTCCACCGTTTTTTCTACAATTAA
326 ACATGACAATGATGCTTTGGTGTCCCAAGAAAAGCTTTTCTTTCCACCGTTTTTGCCACAATCAA
* * * * * * *
133077 AGTTTATCTCTTAAATATGAGAAACATGAATAGTCATACTAATCTCTATTCTTTTCAGGATTAGG
391 AGTTTATCTCTTAAATAAGACAAAAATGAATACTCATACAAATCCCTATTCTTTTCAAGATTAGG
* **
133142 CACCATAAACGTACCCTTGTCATAAGGATACACAATATTGATGCTTTAGTTTTGCAAGAAAGGCT
456 CACCATAAACATACCCTTCCCATAAGGATACACAATATTGATGCTTTAGTTTTGCAAGAAAGGCT
* * *
133207 TTCTTCCCACCAATTTTTGTAAAGCCTAAGTTCGCGCCTCAAATGAGACAAACATGGATTCTAGT
521 TTCTTCCCACCAATTTTTGTAAAACCTAAGTTCACGCCTCAAAAGAGACAAACATGGATTCTAGT
* * *
133272 AATGATTTTCATTCATTTTTTCATTAGGCACCGTAAACACATTCTCCTCATTAGGAAAAATGATA
586 AATGATCTTCATTCATTTTGTCATTAGGCACCATAAACACATTCTCCTCATTAGGAAAAATGATA
133337 TTGATGATTTTCTTCTGCATGGAAATCTTTTATTTGCCCTATTTTCCTCAAAATCAAAGTTCATC
651 TTGATGATTTTCTTCTGCATGGAAATCTTTTATTTGCCCTATTTTCCTCAAAATCAAAGTTCATC
* * * * * * * **
133402 CCTTAAATAAGATAGGCATCAATTCTCCTAATAGTCTCCATTCTTTTAAAGATTAGGAAACTTAA
716 CCTGAAATAAAACAAGCATCAATTCTCCTAACAATCTCCATTCTTTTAAAGATTAAGAAACAAAA
* * * * * * * *
133467 AC-GCATTCCTTTCTTTAGGATG-CATGATATCAATGCTTTTGTGTCGTAAGAAAAGCTTTTGTT
781 ACACCATTAC-TTCATTA-GAAGACATGACATCAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTT
133530 TCCACCGTTTTTGATAGAATCATA-GTTTGTTTGTTAGTCTTC
844 TCCACCGTTTTTGATAGAATCA-AGGTTTGTTTGTTAGTCTTC
** * * * * * * *
133572 TCATTAGGATCCATGATATTTATGCTTTGGTTTTGCAAGAAAGACTTTTTTCCCATCAATTTGTG
1 TCATTAGGAGACATGACATTAATGCTTTGGTGTCGCAAGAAAGACTTTCTTCCCATAAATTTCT-
* *
133637 T-AAAGTCTAAGTTCATCCCTCAAAAGAGGCAAACATGGATTCTAGTAATGCTATTCATTCATTT
65 TCAAAGTCTAAGTTCATCCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTCATTT
* ** ** * * * *
133701 TGTGATTAGGCACTATAAATGCATTCTTTTTATTAGGATAAATGATATTGATGATTTTTTTTTGT
130 TGTG-TTAGGCACCATAAACACATTCTCCTTATTAGGAAAAATGATATTAATGATTTTCTTTTGC
* * **
133766 ATAG-AAATATTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTCACCACTTAAATAAGACAAGC
194 AT-GTAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCACCACAGAAATAAGACAAGC
* *
133830 ATCGATTCTCATAATAGTCTT-CGTTCTTTTCGAGATTAGGAA-CTAAAAACACCTTCAC-TTCA
258 ATCGATTCTCATAATAGT-TTCCATTCTTTTAGAGATTAGGAAGCT--AAACACCTTC-CTTTCA
* * * *
133892 TTAGGAGACATGACAATGATGTTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTTTTGCCA
319 TTAGGAGACATGACAATGATGCTTTGGTGTCCCAAGAAAAGCTTTTCTTTCCACCGTTTTTGCCA
* * * * *
133957 GAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTCTTTTCAA
384 CAATCAAAGTTTATCTCTTAAATAAGACAAAAATGAATACTCATACAAATCCCTATTCTTTTCAA
* * * * * *
134022 GATTATGCACCGTAAGCATACCCTTCCCATTAGGA-CCA-ATGATATTGATGCTTTCGTTTTGCA
449 GATTAGGCACCATAAACATACCCTTCCCATAAGGATACACA--ATATTGATGCTTTAGTTTTGCA
* * * *
134085 AGAAAGGCATTT-TTCCTACCAATTTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACAT
512 AGAAAGGC-TTTCTTCCCACCAATTTTTGTAAAACCTAAGTTCACGCCTCAAAAGAGACAAACAT
* * * *
134149 GGATTCTAGTAATGATCTTGATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGG
576 GGATTCTAGTAATGATCTTCATTCATTTTGTCATTAGGCACCATAAACACATTCTCCTCATTAGG
* * * * *
134214 ATAAATGATATTGATGATTTTCTTTTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATC
641 AAAAATGATATTGATGATTTTCTTCTGCATGGAAATCTTTTATTTGCCCTATTTTCCTCAAAATC
* * **
134279 AAAGTTCATCCCTGAAATAAAACAAGCATCGATTCTCGTAACAATCTCCATTCTTTTTTAGATTA
706 AAAGTTCATCCCTGAAATAAAACAAGCATCAATTCTCCTAACAATCTCCATTCTTTTAAAGATTA
* * ** *
134344 AGAACCAAAAACACCTTTACTTCATTAGAAGACATGACATTGATGCTTTGGTGTCGCAAGAGAAG
771 AGAAACAAAAACACCATTACTTCATTAGAAGACATGACATCAATGCTTTGGTGTCGCAAGAAAAG
*
134409 CTTTTCTTTCCATCGTTTTTGATAGAATCAAGGTTTGT
836 CTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGT
134447 CCCTTAAGTA
Statistics
Matches: 742, Mismatches: 120, Indels: 24
0.84 0.14 0.03
Matches are distributed among these distances:
885 116 0.16
886 147 0.20
887 471 0.63
888 8 0.01
ACGTcount: A:0.30, C:0.18, G:0.14, T:0.38
Consensus pattern (885 bp):
TCATTAGGAGACATGACATTAATGCTTTGGTGTCGCAAGAAAGACTTTCTTCCCATAAATTTCTT
CAAAGTCTAAGTTCATCCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTCATTTT
GTGTTAGGCACCATAAACACATTCTCCTTATTAGGAAAAATGATATTAATGATTTTCTTTTGCAT
GTAAATATTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCACCACAGAAATAAGACAAGCATC
GATTCTCATAATAGTTTCCATTCTTTTAGAGATTAGGAAGCTAAACACCTTCCTTTCATTAGGAG
ACATGACAATGATGCTTTGGTGTCCCAAGAAAAGCTTTTCTTTCCACCGTTTTTGCCACAATCAA
AGTTTATCTCTTAAATAAGACAAAAATGAATACTCATACAAATCCCTATTCTTTTCAAGATTAGG
CACCATAAACATACCCTTCCCATAAGGATACACAATATTGATGCTTTAGTTTTGCAAGAAAGGCT
TTCTTCCCACCAATTTTTGTAAAACCTAAGTTCACGCCTCAAAAGAGACAAACATGGATTCTAGT
AATGATCTTCATTCATTTTGTCATTAGGCACCATAAACACATTCTCCTCATTAGGAAAAATGATA
TTGATGATTTTCTTCTGCATGGAAATCTTTTATTTGCCCTATTTTCCTCAAAATCAAAGTTCATC
CCTGAAATAAAACAAGCATCAATTCTCCTAACAATCTCCATTCTTTTAAAGATTAAGAAACAAAA
ACACCATTACTTCATTAGAAGACATGACATCAATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTC
CACCGTTTTTGATAGAATCAAGGTTTGTTTGTTAGTCTTC
Found at i:134465 original size:476 final size:476
Alignment explanation
Indices: 133567--135390 Score: 2471
Period size: 476 Copynumber: 3.8 Consensus size: 476
133557 TGTTTGTTAG
* * * * *
133567 TCTTCTCATTAGGATCCATGATATTTATGCTTTGGTTTTGCAAGAAAGACTTTTTTCCCATCAAT
1 TCTTCCCATTAGGATCCATGATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTTTTCCCACCAAT
* * * * *
133632 TTGTGTAAAGTCTAAGTTCATCCCTCAAAAGAGGCAAACATGGATTCTAGTAATGCTATTCATTC
66 TTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGATTCTAGTAATGATCTTCATTC
** ** *
133697 ATTTTGTGATTAGGCACTATAAATGCATTCTTTTTATTAGGATAAATGATATTGATGATTTT-TT
131 ATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
* * * * *
133761 TTTGTATAGAAATATTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTCA-CCACTTAAATAAGA
196 TTT-CATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCC-CTTAAATAAGA
* * * *
133825 CAAGCATCGATTCTCATAATAGTCTTCGTTCTTTTCGAGATTAGGAACTAAAAACACCTTCACTT
259 CAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTAGGAACCAAAAACACCTTCACTT
* * * * * *
133890 CATTAGGAGACATGACAATGATGTTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTTTTGC
324 CATTAGAAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGA
*
133955 CAGAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTCTTTTC
389 TAGAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTCTTTTC
134020 AAGATTATGCACCGTAAGCATAC
454 AAGATTATGCACCGTAAGCATAC
* * *
134043 CCTTCCCATTAGGA-CCAATGATATTGATGCTTTCGTTTTGCAAGAAAGGCATTTTTCCTACCAA
1 TCTTCCCATTAGGATCC-ATGATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTTTTCCCACCAA
*
134107 TTTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGATTCTAGTAATGATCTTGATT
65 TTTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGATTCTAGTAATGATCTTCATT
*
134172 CATTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATAAATGATATTGATGATTTTCT
130 CATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCT
* *
134237 TTTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTGAAATAAAAC
195 TTTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGAC
* * ** * *
134302 AAGCATCGATTCTCGTAACAATCTCCATTCTTTTTTAGATTAAGAACCAAAAACACCTTTACTTC
260 AAGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTAGGAACCAAAAACACCTTCACTTC
* *
134367 ATTAGAAGACATGACATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTTTTGAT
325 ATTAGAAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGAT
* *
134432 AGAATCAAGGTTTGTCCCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTCTTTTTT
390 AGAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTC-TTTTC
*
134497 AGGATTATGCACCGTAAGCATAC
454 AAGATTATGCACCGTAAGCATAC
* * * *
134520 TCTTCTCATTAGTATCCATAATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTTTTCCTACCAAT
1 TCTTCCCATTAGGATCCATGATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTTTTCCCACCAAT
*
134585 TTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTC
66 TTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGATTCTAGTAATGATCTTCATTC
* * *
134650 ATTTTGTGATTAGGCACTATAAACACGTCCTCCTCATTAGGATAAATGATATTGATAATTTTCTT
131 ATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
** * * *
134715 TTTCATGGAAATCTTTTCTTTGAGCTATTTTCCTTAAAATCAAAGCTCATCACATAAATAAGACA
196 TTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACA
** * * *
134780 AGCATCGATTCTCGCAACAGTCTCCATTCTTTTAGGGATTGGGAACCAAAAACTA-CTTCACTTC
261 AGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTAGGAACCAAAAAC-ACCTTCACTTC
* * * * *
134844 CTTAGGAA-ACATGACACTGATGCTTTGGTGTTGCAAAAAAAGCTTTTCTTTCCACCGTTTTTTT
325 ATTA-GAAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCG-TTTTTG
* * * * * * *
134908 ATAGAATCAAAGTTTATCTCTTAAATAAGAC-AAACTTGAATATTCATACTAATCCCCATTCTTT
388 ATAGAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATT-AATACTCATACAAATCCCTATTCTTT
* * * *
134972 TCTAGATTAGGCACCGTAAACATAG
452 TCAAGATTATGCACCGTAAGCATAC
* * * **
134997 TCTTCCCATTAGGA-CACACGATATTGATGTTTTGGTTTTGCAA-ATAAGGCTTTCCTCCCACCA
1 TCTTCCCATTAGGATC-CATGATATTGATGCTTTCGTTTTGCAAGA-AAGGCTTTTTTCCCACCA
* * ** * *
135060 ATTTTGGTAAAGTCTGCGTTCGTGCCTCAAATGAGGCAAACATGGATTCTAGTAATGATCTTCAT
64 ATTTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGATTCTAGTAATGATCTTCAT
* * *
135125 TCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGA-AAATGTTGTTGATGATTTTC
129 TCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTC
* * *
135189 ATTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGA
194 TTTTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGA
* * * * * * * *
135254 CAAGTATCAATTCTCATAATAGCCTCCATTCTTTTCGAGTTTGGGAACCAAAATCAACTTCACTT
259 CAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTAGGAACCAAAAACACCTTCACTT
* ** *
135319 CATTAGGAGACATGACATTGATGCTTTGGTGTTC-CAAGAAAAGCTTTTCCATCCACCATTTTTG
324 CATTAGAAGACATGACATTGATGCTTTGGTG-TCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTG
135383 ATAGAATC
388 ATAGAATC
135391 TGTTAGGATT
Statistics
Matches: 1194, Mismatches: 140, Indels: 29
0.88 0.10 0.02
Matches are distributed among these distances:
475 18 0.02
476 568 0.48
477 550 0.46
478 58 0.05
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (476 bp):
TCTTCCCATTAGGATCCATGATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTTTTCCCACCAAT
TTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGATTCTAGTAATGATCTTCATTC
ATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTT
TTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACA
AGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTAGGAACCAAAAACACCTTCACTTCA
TTAGAAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATA
GAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTCTTTTCAA
GATTATGCACCGTAAGCATAC
Found at i:135183 original size:953 final size:953
Alignment explanation
Indices: 133567--135390 Score: 2593
Period size: 953 Copynumber: 1.9 Consensus size: 953
133557 TGTTTGTTAG
* * * *
133567 TCTTCTCATTAGGATCCATGATATTTATGCTTTGGTTTTGCAAGAAAGACTTTTTTCCCATCAAT
1 TCTTCTCATTAGGATCCATAATATTGATGCTTTCGTTTTGCAAGAAAGACTTTTTTCCCACCAAT
* * *
133632 TTGTGTAAAGTCTAAGTTCATCCCTCAAAAGAGGCAAACATGGATTCTAGTAATGCTATTCATTC
66 TTGTGTAAAATCTAAGTTCATCCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTC
** * ** * *
133697 ATTTTGTGATTAGGCACTATAAATGCATTCTTTTTATTAGGATAAATGATATTGATGATTTTTTT
131 ATTTTGTGATTAGGCACTATAAACACATCCTCCTCATTAGGATAAATGATATTGATAATTTTTTT
* * * * *
133762 TTGTATAGAAATATTTTCTTTGTCCTATTTTTCTTAAAATCAAAGTTCACCACTTAAATAAGACA
196 TTGCATAGAAATATTTTCTTTGACCTATTTTCCTTAAAATCAAAGCTCACCACATAAATAAGACA
* * * * * *
133827 AGCATCGATTCTCATAATAGTCTTCGTTCTTTTCGAGATTAGGAACTAAAAACACCTTCACTTCA
261 AGCATCGATTCTCACAACAGTCTCCATTCTTTTAGAGATTAGGAACCAAAAACACCTTCACTTCA
* * * * * *
133892 TTAGGAGACATGACAATGATGTTTTGGTGTCGCAAGAGAAGCTTTTCTTTCCATCGTTTTTGCCA
326 TTAGGAAACATGACAATGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCCACCGTTTTTGACA
* * * *
133957 GAATCAAGGTTTGTCTCTTAAGTAAGACAAAAATTAATACTCATACAAATCCCTATTCTTTTCAA
391 GAATCAAAGTTTATCTCTTAAATAAGACAAAAATTAATACTCATACAAATCCCCATTCTTTTCAA
* * *
134022 GATTATGCACCGTAAGCATACCCTTCCCATTAGGACCAATGATATTGATGCTTTCGTTTTGCAAG
456 GATTAGGCACCGTAAACATACCCTTCCCATTAGGACCAACGATATTGATGCTTTCGTTTTGCAAG
* * *
134087 AAAGGCATTTTTCCTACCAATTTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGA
521 AAAGGCATTTCTCCCACCAATTTTGGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGA
* * *
134152 TTCTAGTAATGATCTTGATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCTTTAGGATA
586 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
* * *
134217 AATGATATTGATGATTTTCTTTTTCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
651 AATGATATTGATGATTTTCATTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAAAATCAAA
* * * **
134282 GTTCATCCCTGAAATAAAACAAGCATCGATTCTCGTAACAATCTCCATTCTTTTTTAGATTAAGA
716 GTTCATCCCTGAAATAAAACAAGCATCAATTCTCATAACAACCTCCATTCTTTTCGAGATTAAGA
* * *
134347 ACCAAAAACACCTTTACTTCATTAGAAGACATGACATTGATGCTTTGGTG-TCGCAAGAGAAGCT
781 ACCAAAAACAACTTCACTTCATTAGAAGACATGACATTGATGCTTTGGTGTTC-CAAGAAAAGCT
** * *
134411 TTTCTTTCCATCGTTTTTGATAGAATCAAGGTTTGTCCCTTAAGTAAGACAAAAATTAATACTCA
845 TTTCCATCCACCATTTTTGATAGAATCAAGGTTTGTCCCTTAAGTAAGACAAAAATTAATACTCA
134476 TACAAATCCCTATTCTTTTTTAGGATTATGCACCGTAAGCATAC
910 TACAAATCCCTATTCTTTTTTAGGATTATGCACCGTAAGCATAC
* * *
134520 TCTTCTCATTAGTATCCATAATATTGATGCTTTCGTTTTGCAAGAAAGGCTTTTTTCCTACCAAT
1 TCTTCTCATTAGGATCCATAATATTGATGCTTTCGTTTTGCAAGAAAGACTTTTTTCCCACCAAT
* * *
134585 TTTTGTAAAATCTAAGTTCATGCCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTC
66 TTGTGTAAAATCTAAGTTCATCCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTC
*
134650 ATTTTGTGATTAGGCACTATAAACACGTCCTCCTCATTAGGATAAATGATATTGATAATTTTCTT
131 ATTTTGTGATTAGGCACTATAAACACATCCTCCTCATTAGGATAAATGATATTGATAATTTT-TT
* * * *
134715 TTT-CATGGAAATCTTTTCTTTGAGCTATTTTCCTTAAAATCAAAGCTCATCACATAAATAAGAC
195 TTTGCATAGAAATATTTTCTTTGACCTATTTTCCTTAAAATCAAAGCTCACCACATAAATAAGAC
* * *
134779 AAGCATCGATTCTCGCAACAGTCTCCATTCTTTTAGGGATTGGGAACCAAAAACTA-CTTCACTT
260 AAGCATCGATTCTCACAACAGTCTCCATTCTTTTAGAGATTAGGAACCAAAAAC-ACCTTCACTT
* * * *
134843 CCTTAGGAAACATGACACTGATGCTTTGGTGTTGCAAAAAAAGCTTTTCTTTCCACCGTTTTTTT
324 CATTAGGAAACATGACAATGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCCACCG-TTTTTG
* * * *
134908 ATAGAATCAAAGTTTATCTCTTAAATAAGAC-AAACTTGAATATTCATACTAATCCCCATTCTTT
388 ACAGAATCAAAGTTTATCTCTTAAATAAGACAAAAATT-AATACTCATACAAATCCCCATTCTTT
* ** * *
134972 TCTAGATTAGGCACCGTAAACATAGTCTTCCCATTAGGA-CACACGATATTGATGTTTTGGTTTT
452 TCAAGATTAGGCACCGTAAACATACCCTTCCCATTAGGACCA-ACGATATTGATGCTTTCGTTTT
* ** * *
135036 GCAA-ATAAGGC-TTTCCTCCCACCAATTTTGGTAAAGTCTGCGTTCGTGCCTCAAATGAGGCAA
516 GCAAGA-AAGGCATTT-CTCCCACCAATTTTGGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAA
135099 ACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCAT
579 ACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCAT
* *
135164 TAGGA-AAATGTTGTTGATGATTTTCATTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAA
644 TAGGATAAATGATATTGATGATTTTCATTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAA
* * * * *
135228 AATCAAAGTTCATCCCTTAAATAAGACAAGTATCAATTCTCATAATAGCCTCCATTCTTTTCGAG
709 AATCAAAGTTCATCCCTGAAATAAAACAAGCATCAATTCTCATAACAACCTCCATTCTTTTCGAG
* ** * *
135293 TTTGGGAACCAAAATCAACTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTTCCAAGA
774 ATTAAGAACCAAAAACAACTTCACTTCATTAGAAGACATGACATTGATGCTTTGGTGTTCCAAGA
135358 AAAGCTTTTCCATCCACCATTTTTGATAGAATC
839 AAAGCTTTTCCATCCACCATTTTTGATAGAATC
135391 TGTTAGGATT
Statistics
Matches: 760, Mismatches: 103, Indels: 16
0.86 0.12 0.02
Matches are distributed among these distances:
953 529 0.70
954 231 0.30
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.37
Consensus pattern (953 bp):
TCTTCTCATTAGGATCCATAATATTGATGCTTTCGTTTTGCAAGAAAGACTTTTTTCCCACCAAT
TTGTGTAAAATCTAAGTTCATCCCTCAAAAGAGACAAACATGGATTCTAGTAATGATATTCATTC
ATTTTGTGATTAGGCACTATAAACACATCCTCCTCATTAGGATAAATGATATTGATAATTTTTTT
TTGCATAGAAATATTTTCTTTGACCTATTTTCCTTAAAATCAAAGCTCACCACATAAATAAGACA
AGCATCGATTCTCACAACAGTCTCCATTCTTTTAGAGATTAGGAACCAAAAACACCTTCACTTCA
TTAGGAAACATGACAATGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCCACCGTTTTTGACA
GAATCAAAGTTTATCTCTTAAATAAGACAAAAATTAATACTCATACAAATCCCCATTCTTTTCAA
GATTAGGCACCGTAAACATACCCTTCCCATTAGGACCAACGATATTGATGCTTTCGTTTTGCAAG
AAAGGCATTTCTCCCACCAATTTTGGTAAAATCTAAGTTCATGCCTCAAAAGAGGCAAACATGGA
TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATA
AATGATATTGATGATTTTCATTTGCATGGAAATCTTTTCTTTGCACTATTTTCCTTAAAATCAAA
GTTCATCCCTGAAATAAAACAAGCATCAATTCTCATAACAACCTCCATTCTTTTCGAGATTAAGA
ACCAAAAACAACTTCACTTCATTAGAAGACATGACATTGATGCTTTGGTGTTCCAAGAAAAGCTT
TTCCATCCACCATTTTTGATAGAATCAAGGTTTGTCCCTTAAGTAAGACAAAAATTAATACTCAT
ACAAATCCCTATTCTTTTTTAGGATTATGCACCGTAAGCATAC
Found at i:135628 original size:21 final size:21
Alignment explanation
Indices: 135595--135635 Score: 57
Period size: 21 Copynumber: 2.0 Consensus size: 21
135585 CTAAGTAAAA
135595 ATACGTATTGTATCAATACAT
1 ATACGTATTGTATCAATACAT
*
135616 ATAC-TATTGGTATTAATACA
1 ATACGTATT-GTATCAATACA
135636 CAAGGTTGAC
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
20 4 0.22
21 14 0.78
ACGTcount: A:0.39, C:0.12, G:0.10, T:0.39
Consensus pattern (21 bp):
ATACGTATTGTATCAATACAT
Found at i:135700 original size:20 final size:19
Alignment explanation
Indices: 135675--135743 Score: 75
Period size: 20 Copynumber: 3.5 Consensus size: 19
135665 ACCCTGAAAA
135675 GTATCGATACACATTTAAAT
1 GTATCGATACACA-TTAAAT
* **
135695 GTATCGATACAGATTGCAT
1 GTATCGATACACATTAAAT
*
135714 AGTATCGATACACATAAATAT
1 -GTATCGATACACATTAA-AT
135735 GTATCGATA
1 GTATCGATA
135744 TATGACATTA
Statistics
Matches: 40, Mismatches: 7, Indels: 4
0.78 0.14 0.08
Matches are distributed among these distances:
19 4 0.10
20 34 0.85
21 2 0.05
ACGTcount: A:0.39, C:0.14, G:0.14, T:0.32
Consensus pattern (19 bp):
GTATCGATACACATTAAAT
Found at i:135796 original size:53 final size:52
Alignment explanation
Indices: 135715--135851 Score: 175
Period size: 53 Copynumber: 2.6 Consensus size: 52
135705 AGATTGCATA
* * *
135715 GTATCGATACACATAAATATGTATCGATATATGACATTAGCAGTAGCCAAATTT
1 GTATCGATACAC--AAATATGTATCGATACAGGACACTAGCAGTAGCCAAATTT
* * *
135769 GTATCGATACACACAATATGTATCGATACAGGTCACTGGTAGTAGCCAAATTT
1 GTATCGATACACA-AATATGTATCGATACAGGACACTAGCAGTAGCCAAATTT
*
135822 GTATTGATACACAAACTATGTATCGATACA
1 GTATCGATACACAAA-TATGTATCGATACA
135852 TTGGTAGTAG
Statistics
Matches: 74, Mismatches: 7, Indels: 5
0.86 0.08 0.06
Matches are distributed among these distances:
52 3 0.04
53 59 0.80
54 12 0.16
ACGTcount: A:0.37, C:0.17, G:0.16, T:0.30
Consensus pattern (52 bp):
GTATCGATACACAAATATGTATCGATACAGGACACTAGCAGTAGCCAAATTT
Found at i:135894 original size:10 final size:10
Alignment explanation
Indices: 135875--135904 Score: 51
Period size: 10 Copynumber: 3.0 Consensus size: 10
135865 AATCTCATTT
135875 TCACTGTTCA
1 TCACTGTTCA
*
135885 TCACTATTCA
1 TCACTGTTCA
135895 TCACTGTTCA
1 TCACTGTTCA
135905 CGTATCACTA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
10 18 1.00
ACGTcount: A:0.23, C:0.30, G:0.07, T:0.40
Consensus pattern (10 bp):
TCACTGTTCA
Found at i:136179 original size:20 final size:19
Alignment explanation
Indices: 136154--136224 Score: 70
Period size: 20 Copynumber: 3.6 Consensus size: 19
136144 ACCCTGAAAA
136154 GTATCGATACACATTTAAAT
1 GTATCGATACACA-TTAAAT
* **
136174 GTATCGATACAGATTGCAT
1 GTATCGATACACATTAAAT
**
136193 AGTATCGATACACACAAATAT
1 -GTATCGATACACATTAA-AT
136214 GTATCGATACA
1 GTATCGATACA
136225 GGACATTGGC
Statistics
Matches: 41, Mismatches: 8, Indels: 4
0.77 0.15 0.08
Matches are distributed among these distances:
19 4 0.10
20 35 0.85
21 2 0.05
ACGTcount: A:0.39, C:0.17, G:0.14, T:0.30
Consensus pattern (19 bp):
GTATCGATACACATTAAAT
Found at i:136251 original size:34 final size:34
Alignment explanation
Indices: 136207--136292 Score: 127
Period size: 34 Copynumber: 2.5 Consensus size: 34
136197 TCGATACACA
* * * *
136207 CAAATATGTATCGATACAGGACATTGGCAGTAGC
1 CAAATTTGTATCGATACAGGACACTAGCAATAGC
*
136241 CAAATTTGTATCGATACAGGTCACTAGCAATAGC
1 CAAATTTGTATCGATACAGGACACTAGCAATAGC
136275 CAAATTTGTATCGATACA
1 CAAATTTGTATCGATACA
136293 CAAACTATGT
Statistics
Matches: 47, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
34 47 1.00
ACGTcount: A:0.36, C:0.19, G:0.19, T:0.27
Consensus pattern (34 bp):
CAAATTTGTATCGATACAGGACACTAGCAATAGC
Found at i:136387 original size:21 final size:21
Alignment explanation
Indices: 136353--136412 Score: 102
Period size: 21 Copynumber: 2.8 Consensus size: 21
136343 CATCACAATT
136353 CATCACTGTTCATGTATCGATA
1 CATCACT-TTCATGTATCGATA
136375 CATCACTTTCATGTATCGATA
1 CATCACTTTCATGTATCGATA
*
136396 CATCACTTTCACGTATC
1 CATCACTTTCATGTATC
136413 ACTATTCATG
Statistics
Matches: 37, Mismatches: 1, Indels: 1
0.95 0.03 0.03
Matches are distributed among these distances:
21 30 0.81
22 7 0.19
ACGTcount: A:0.27, C:0.27, G:0.10, T:0.37
Consensus pattern (21 bp):
CATCACTTTCATGTATCGATA
Found at i:137000 original size:34 final size:35
Alignment explanation
Indices: 136937--137003 Score: 102
Period size: 37 Copynumber: 1.9 Consensus size: 35
136927 CTAAGTGATT
136937 GAGAGGTTCTATCTTAGCCTTTGAAAAAGATAGAGA
1 GAGAGGTTCTATCTTAGCCTTTG-AAAAGATAGAGA
136973 GAGAGGTTTCTATCTTAGCC-TTG-AAAGATAG
1 GAGAGG-TTCTATCTTAGCCTTTGAAAAGATAG
137004 TGTTGTAAGG
Statistics
Matches: 30, Mismatches: 0, Indels: 4
0.88 0.00 0.12
Matches are distributed among these distances:
34 8 0.27
36 9 0.30
37 13 0.43
ACGTcount: A:0.33, C:0.12, G:0.25, T:0.30
Consensus pattern (35 bp):
GAGAGGTTCTATCTTAGCCTTTGAAAAGATAGAGA
Found at i:138684 original size:159 final size:157
Alignment explanation
Indices: 137572--140588 Score: 481
Period size: 159 Copynumber: 19.1 Consensus size: 157
137562 ATTTCCTTAA
* * * * * * *
137572 AATCAAAGTTCATCCCTAAAATAAAACAAGCATCAATTCTCGTAA-AAGTCTCCATTCTTTT-AA
1 AATCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCATAACAA-TCTCCATTCTTTTCGA
* * * * * * * * *
137635 CGATTAGAAAGCTAAAACACATTCCCTTCTTTAGGATACATGACATTGATGCTTTAGTATCGCAA
64 -GATTAGGAACCAAAAACACCTT-TCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAA
* *
137700 GAAAAGCTTTTCCTTCCACCATTTTTGATTG
127 GAAAAGCTTTTCTTTCCACCATTTTTGATAG
** * * * * ** * *
137731 AATCAAAGTTTGTCTATTAGATACGACAAACAT-GAATAGTCA-AACTAATCCCCATTCTTTTCA
1 AATCAAAGTTCATC-CTTAAACAAGACAAACATCG-ATTCTCATAAC-AATCTCCATTCTTTTCG
* * * ** * ** * * * *
137794 AGATTAGGCATCATAAACATAGTCTTC-TCATTGGGATCCATGATATTAATGCTTTGGTTTTGCA
63 AGATTAGGAACCAAAAACA-CCT-TTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCA
** *
137858 AGAAAAGC-TTTC-CCCCCCCAATTTTTG-TA-
126 AGAAAAGCTTTTCTTTCCACC-ATTTTTGATAG
** * * ** * ** * * *
137887 AAGTGTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT-AGTAATGATTTTCACTCATTTT-
1 AA-TCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCA-TAACAATCTCCATTC-TTTTC
* * * * * * * * * * * * * *
137950 GTGATTAGGCACTATAAACA-CATTCTGCCCATTAGGATAAATGATATAGATGATTTTGTTTTGC
62 GAGATTAGGAACCAAAAACACCTTTCT--TCATTAGGAGACATGACATTGATGCTTTGGTGTCGC
* * * * *
138014 ATGGAAATCTTTT-TTT--ATCCTATTTTCGTTA-
125 AAGAAAAGCTTTTCTTTCCA-CC-ATTTTTGATAG
* * * * * * * * *
138045 AATCAAAGTTCATCCCTTAAATAAGACAAGCTTCAATTCTCGTAACAGTCTCCATTCCTTTAGGG
1 AATCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCATAACAATCTCCATTCTTTTCGAG
* * * * * *
138110 ATTGGGAACCTAAAACAACTTCACTTCTTTAGGAGACATGACATTGAAGCTTTGGTGTCGCAAGA
65 ATTAGGAACCAAAAACACCTT-TCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGA
138175 AAAGCTTTTCTTTCCACCATTTTTGATAG
129 AAAGCTTTTCTTTCCACCATTTTTGATAG
* * * *
138204 AATCAAAGTTTATCTCTT-AACTAAGACAAAC-TTGAATAT-TCAT-ACTAACCACCATTCTTTT
1 AATCAAAGTTCATC-CTTAAAC-AAGACAAACATCG-AT-TCTCATAAC-AATCTCCATTCTTTT
* * ** * * * * *
138265 CTAGATTAGGCACCGTAAACA--TAGTCTTCCCATTAGGACACACGATATTGATGCTTTGGTTTC
61 CGAGATTAGGAACCAAAAACACCT-TTCTT--CATTAGGAGACATGACATTGATGCTTTGGTGTC
* * * * * *
138328 GCAAGTAAGGC-TTTCCTCCCACCAATTTTGGTA-
123 GCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAG
* * * * * * ** * *
138361 AAGTCTACGTTCGTGCCTTAAATAAGACAAACATGGATTCTAATAATGATCTTCATT-TATTTTG
1 AA-TCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCATAACAATCTCCATTCT-TTTCG
* * * * * * * * * * * ** * * *
138425 TGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTCATGATTTTCTTTTGCAT
63 AGATTAGGAACCAAAAACACCTT-TCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAA
* *** *
138490 GAAAATCTTTTCTTT--ATCCTATTTTCCTTAA
127 GAAAAGCTTTTCTTTCCA-CC-ATTTTTGATAG
* *
138521 AATCATAGTTCATCACTTAAACAAGACAAGCATCGATTCTCATAACAATCTCCATTCTTTTCGAG
1 AATCAAAGTTCATC-CTTAAACAAGACAAACATCGATTCTCATAACAATCTCCATTCTTTTCGAG
* *
138586 ATTGGGAACCAAAAACACCTTTACTTCATTAGGAGACATGACATTGATTCTTTGGTGTCGCAAGA
65 ATTAGGAACCAAAAACACCTTT-CTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGA
*
138651 AAAGCTTTTCTTTCCACCGTTTTTGATAG
129 AAAGCTTTTCTTTCCACCATTTTTGATAG
* * *** * * * * *
138680 AATCAAGGTTTGCCT-CTTAAGTTAGACAAACA-CAAATACTCTTACCAATC-CCTATTTTTTTC
1 AATCAAAG-TT-CATCCTTAAACAAGACAAACATC-GATTCTCATAACAATCTCC-ATTCTTTTC
* * * ** * ** * * * *
138742 -AGGATTAGGCACTACAAACATAGTCTTC-TCATTAGAATCCATGATATTAATGCTTTGGTTTTG
62 GA-GATTAGGAACCAAAAACA-CCT-TTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCG
* * **
138805 CAAGAAAGGCTTTT-TTCCCAAAATTTTTG-TA-
124 CAAGAAAAGCTTTTCTTTCCACCATTTTTGATAG
* * * ** * *** *
138836 AAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCT-AGTATTGATCTTCATTCATTTT-
1 AA-TCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCA-TAACAATCTCCATTC-TTTTC
* * ** * ** * * * ** * ** * *
138899 GTGATTAGGCATTATAAACAAATTCTCCTCATTAGG-GTAAATGATACGGATGATTTTCTTTTGC
62 GAGATTAGGAACCAAAAACACCTT-TCTTCATTAGGAG-ACATGACATTGATGCTTTGGTGTCGC
* * * * *** * *
138963 ATGGAAATCTTTTTTTTTGTCCTATTTTCGTTA-
125 AAGAAAAGCTTTTCTTTCCACC-ATTTTTGATAG
* * * * * * * * * *
138996 AATTAAAGTTCATCCCTTAAAAAAGATAAGCTTC-ATTTCTCATAACAGTCTCTATTCCTTTAGG
1 AATCAAAGTTCAT-CCTTAAACAAGACAAACATCGA-TTCTCATAACAATCTCCATTCTTTTCGA
* * * * *
139060 GATTGGGAACCTAAAACAACTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTTGCAAG
64 GATTAGGAACCAAAAACACCTT-TCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG
* * *
139125 AAAAGCTTTTTTTTTTCCACCGTTTTTGTTAG
128 AAAAGC--TTTTCTTTCCACCATTTTTGATAG
* * * * * * * *
139157 AATGAAAGTTTAACTCTTAAAAAAGATAAAGC--CGAATACTTAT-ACTAATCTCCATTTTTTTT
1 AATCAAAGTTCATC-CTTAAACAAGACAAA-CATCG-ATTCTCATAAC-AATCTCCA-TTCTTTT
* * * ** * * * * ** * *
139219 CTAGATTAGGCACCATAAACATAGTTTC-TCTTTAGGATACACGATATTGACACTTTGGTTTTGC
61 CGAGATTAGGAACCAAAAACA-CCTTTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGC
* * **
139283 AAGAAAGGC-TTTCTTTCCACCAATTTTGGGA-
125 AAGAAAAGCTTTTCTTTCCACCATTTTTGATAG
* * * * * * ** *
139314 AAGTCTACGTTCGTGCCTCAAATAAGACAAACATGGATTCT-AGTAATGATCTTCATTCATTTT-
1 AA-TCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCA-TAACAATCTCCATTC-TTTTC
* ** * * * * * * * ** * *
139377 GTGATTAGCCACCATAAACACATTCTCGTCATTAGGAAAAATGATATTGATGATTTTTTTTTGCA
62 GAGATTAGGAACCAAAAACACCTT-TCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCA
* * * *** *
139442 TGGAAATG-TTTTCTTTGCC-CTATTTTCCTTAA
126 -AGAAAAGCTTTTCTTT-CCACCATTTTTGATAG
* * * * * * * * *
139474 AATCAAAGTTTATCCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTTTTCATTCTTTTCAAG
1 AATCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCTCATAACAATCTCCATTCTTTTCGAG
* * * * ** * * * *
139539 ATTGGGAACCTAAAACGCAATCCCTTCTTTAAGATACATGACATTGATG-TTTGGTGTCGTAAGA
65 ATTAGGAACCAAAAACAC-CTTTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGA
* * *
139603 AAAGTTTTTCCTTT-CACCGTTTTTGAAAG
129 AAAGCTTTT-CTTTCCACCATTTTTGATAG
* * * * ** ** * *
139632 AATAAAAGTTTATCCCTAAA-ATACAACAAACATAAATAGTCAT-ACTAATCCCCATTCTTTTCA
1 AATCAAAGTTCATCCTTAAACA-A-GACAAACATCGATTCTCATAAC-AATCTCCATTCTTTTCG
* * ** ** ** * * *
139695 AGATTAGGCATCTTAAACATAGTCTTC-TCATTAGGATCCATGATATTGATGCTTTGGTTTTGCA
63 AGATTAGGAACCAAAAACA-CCT-TTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCA
** * * *
139759 AG-AAAGGGTTTCTTTCTACCAATTTTT-TTAA
126 AGAAAAGCTTTTCTTTCCACC-ATTTTTGATAG
* * * * ** * * * * *
139790 AATCTAGGTTCGTACCTCAAATGAGACAAACATGGAATCTAGCA-AA-GATGTTCATTCATTTT-
1 AATCAAAGTTCAT-CCTTAAACAAGACAAACATCGATTCT--CATAACAATCTCCATTC-TTTTC
* ** * * * * * * * ** * **
139852 GTGATTAGGCTCTATAAAA-ACATTCTCCTCATTAGG-GAAAACGATATTGATGATTTTTTTTTA
62 GAGATTAGGAACCA-AAAACACCTT-TCTTCATTAGGAG-ACATGACATTGATGCTTTGGTGTCG
*** * ***
139915 TGTGAAAATCTTTTCTTT--ACCTTATTTTCCTTCA-
124 CAAGAAAAGCTTTTCTTTCCACC--ATTTTTGAT-AG
* * * * ** * *
139949 AATCAAAATTCATTCCTTAAATAAGAAAAACATTGATTCTTGTAACAGA-CTCCATTTTTTTCAA
1 AATCAAAGTTCA-TCCTTAAACAAGACAAACATCGATTCTCATAACA-ATCTCCATTCTTTTCGA
* * * * *
140013 GATTGGGAAGCC-AAAACACATTTCTTCCATTAAGATACATGACATTGATG-TTTGGTGTCACAA
64 GATTAGGAA-CCAAAAACACCTTTCTT-CATTAGGAGACATGACATTGATGCTTTGGTGTCGCAA
* *
140076 GAAAAGCTTTTCTTTCTACCATTTCTGATAG
127 GAAAAGCTTTTCTTTCCACCATTTTTGATAG
** * * * *
140107 AATCAAAGTTTGTCCCTTAAATAAGACAAACAT-GAATACTTAT-ACTAATCCCCATTCTTTTC-
1 AATCAAAGTTCAT-CCTTAAACAAGACAAACATCG-ATTCTCATAAC-AATCTCCATTCTTTTCG
* * *** * * * *
140169 AGGATTGGGCA-CTGTAA-A-C--TC--C-TTAGGATACATGATATTGATGCTTTGGTTTCCCAA
63 A-GATTAGGAACCAAAAACACCTTTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAA
* *
140226 GAAAGGC-TTT-TTTCACACTAATTTTTG-TA-
127 GAAAAGCTTTTCTTTC-CAC-CATTTTTGATAG
* * ** * ** *
140255 AAGTCTAAGGTCATGTCC-TAAATGAGACAAACATGGATTCT-AGTAATGATCTTCATTCATTTT
1 AA-TCAAAGTTCA--TCCTTAAACAAGACAAACATCGATTCTCA-TAACAATCTCCATTC-TTTT
* * * * * * * * * * * ** * *
140318 -GTA-ATTTGGCACTATAAACACATTCTCCTCGTTAGGATAAATGATATTGATGATTTTCTTTTG
61 CG-AGATTAGGAACCAAAAACACCTT-TCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCG
* * * * *
140381 CATGAAAACCTTTTCTTT--ACCCTATTTTCATTAA
124 CAAGAAAAGCTTTTCTTTCCACCAT-TTTTGA-TAG
* * * * * * * *
140415 AATCAACA-TTCATCCCTTAAATAAGACAAGCATTGATTCACGTAACCATCTCCATTCATTTCAA
1 AATCAA-AGTTCAT-CCTTAAACAAGACAAACATCGATTCTCATAACAATCTCCATTCTTTTCGA
* ** * * * **
140479 GATTAGGAACCAAAAGCATATTTCCTTCATTAGGATAAATGACATTGATGTTTTGGTGTCAAAAG
64 GATTAGGAACCAAAAACACCTTT-CTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG
*
140544 AAAAACTTTTCTTTCCACCATTTTTGATAG
128 AAAAGCTTTTCTTTCCACCATTTTTGATAG
*
140574 AGTCAAAGTTCATCC
1 AATCAAAGTTCATCC
140589 CTCAAATAAC
Statistics
Matches: 2027, Mismatches: 644, Indels: 375
0.67 0.21 0.12
Matches are distributed among these distances:
148 7 0.00
149 67 0.03
150 34 0.02
151 3 0.00
153 2 0.00
154 3 0.00
155 5 0.00
156 21 0.01
157 337 0.17
158 558 0.28
159 807 0.40
160 66 0.03
161 92 0.05
162 22 0.01
163 3 0.00
ACGTcount: A:0.32, C:0.18, G:0.14, T:0.36
Consensus pattern (157 bp):
AATCAAAGTTCATCCTTAAACAAGACAAACATCGATTCTCATAACAATCTCCATTCTTTTCGAGA
TTAGGAACCAAAAACACCTTTCTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAA
AGCTTTTCTTTCCACCATTTTTGATAG
Found at i:139066 original size:475 final size:472
Alignment explanation
Indices: 137253--140583 Score: 3666
Period size: 475 Copynumber: 7.0 Consensus size: 472
137243 TTGAGCTCAC
** * * * * * *
137253 AGAATCAAAGTTTATCTGTTAAATAAGACAAACTTGAATACTCATACCAATCCCAAATCTTTTTC
1 AGAATCAAAGTTTGCCTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATTC-TTTTC
* * ** * * * * **
137318 AGACTACGCACCGTAAACATAGTTTTCTCGTTAGGATACGTGATATTGATGCTTTGGTTTCACAA
65 AGATTAGGCACTATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGCAA
* * * * *
137383 GAAAGGCTTTCTTCCCGCCAATTTTGGTAAAGCCTAAGGTCGTGCCTCAAATGAGACAAACATGG
130 GAAAGGCTTTTTTCCC-ACAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* * * * *
137448 ATTCTAATAATGATCTTCATTCATTTTGTGATTAGGCACTACAAACACATTCTCTTCATTATGAA
194 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGAT
* * * * *
137513 AAAAGATATTGATGATTTTCTTTTGCAAGGAAACCTTTTCTTTGCCCTAATTTCCTTAAAATCAA
259 AAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * * * *
137578 AGTTCATCCCTAAAATAAAACAAGCATCAATTCTCGTAAAAGTCTCCATTCTTTTAACGATTAGA
324 AGTTCATCCCTTAAATAAGACAAGCTTC-ATTCTCGTAACAGTCTCCATTCTTTTAA-GATTGGG
* * * * * *
137643 AAGCTAAAACACATTCCCTTCTTTAGGATACATGACATTGATGCTTTAGTATCGCAAGAAAAGCT
387 AACCTAAAACACATTCACTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGCT
*
137708 TTTCCTTCCACCATTTTTGAT
452 TTTCTTTCCACCATTTTTGAT
* * * * * * * *
137729 TGAATCAAAGTTTGTCTATTAGATACGACAAACATGAATAGTCAAACTAATCCCCATTCTTTTCA
1 AGAATCAAAGTTTGCCTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC-
* *
137794 AGATTAGGCA-TCATAAACATAGTCTTCTCATTGGGATCCATGATATTAATGCTTTGGTTTTGCA
65 AGATTAGGCACT-ATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGCA
* *** * *
137858 AGAAAAGCTTTCCCCCCCCAATTTTTGTAAAGTGTAAGTTCGTGCCTCAAATGAGACAAACATGG
129 AGAAAGGCTTTTTTCCCACAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGG
* *
137923 ATTCTAGTAATGATTTTCACTCATTTTGTGATTAGGCACTATAAACACATTCTGCC-CATTAGGA
194 ATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCT-CCTCATTAGGA
* * * *
137987 TAAATGATATAGATGATTTTGTTTTGCATGGAAATCTTTT-TTTATCCTATTTTCGTT-AAATCA
258 TAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCA
* *
138050 AAGTTCATCCCTTAAATAAGACAAGCTTCAATTCTCGTAACAGTCTCCATTCCTTTAGGGATTGG
323 AAGTTCATCCCTTAAATAAGACAAGCTTC-ATTCTCGTAACAGTCTCCATTCTTTTA-AGATTGG
* * **
138115 GAACCTAAAACA-ACTTCACTTCTTTAGGAGACATGACATTGAAGCTTTGGTGTCGCAAGAAAAG
386 GAACCTAAAACACA-TTCACTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAG
138179 CTTTTCTTTCCACCATTTTTGAT
450 CTTTTCTTTCCACCATTTTTGAT
** ** * *
138202 AGAATCAAAGTTTATCTCTTAACTAAGACAAACTTGAATATTCATACTAA-CCACCATTCTTTTC
1 AGAATCAAAGTTTGCCTCTTAAAAAAGACAAACATGAATACTCATACTAATCC-CCATTCTTTTC
** * * *
138266 TAGATTAGGCACCGTAAACATAGTCTTCCCATTAGGA-CACACGATATTGATGCTTTGGTTTCGC
65 -AGATTAGGCACTATAAACATAGTCTTCTCATTAGGATC-CATGATATTGATGCTTTGGTTTTGC
* ** * * * *
138330 AAGTAAGGCTTTCCTCCCACCAATTTTGGTAAAGTCTACGTTCGTGCCTTAAATAAGACAAACAT
128 AAGAAAGGCTTTTTTCCCA-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACAT
* *
138395 GGATTCTAATAATGATCTTCATTTATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
192 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * *
138460 ATAAATGATATTCATGATTTTCTTTTGCATGAAAATCTTTTCTTTATCCTATTTTCCTTAAAATC
257 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * * * * * *
138525 ATAGTTCATCACTTAAACAAGACAAGCATCGATTCTCATAACAATCTCCATTCTTTTCGAGATTG
322 AAAGTTCATCCCTTAAATAAGACAAGCTTC-ATTCTCGTAACAGTCTCCATTCTTTT-AAGATTG
* * * *
138590 GGAACCAAAAACACCTTTACTTCATTAGGAGACATGACATTGATTCTTTGGTGTCGCAAGAAAAG
385 GGAACCTAAAACACATTCACTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAG
*
138655 CTTTTCTTTCCACCGTTTTTGAT
450 CTTTTCTTTCCACCATTTTTGAT
* *** ** * * * *
138678 AGAATCAAGGTTTGCCTCTTAAGTTAGACAAACACAAATACTCTTACCAATCCCTATTTTTTTCA
1 AGAATCAAAGTTTGCCTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCA
* * *
138743 GGATTAGGCACTACAAACATAGTCTTCTCATTAGAATCCATGATATTAATGCTTTGGTTTTGCAA
66 -GATTAGGCACTATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGCAA
*
138808 GAAAGGCTTTTTTCCCAAAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
130 GAAAGGCTTTTTTCCCACAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGA
* * * *
138873 TTCTAGTATTGATCTTCATTCATTTTGTGATTAGGCATTATAAACAAATTCTCCTCATTAGGGTA
195 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATA
** * ** * *
138938 AATGATACGGATGATTTTCTTTTGCATGGAAATCTTTTTTTTTGTCCTATTTTCGTT-AAATTAA
260 AATGATATTGATGATTTTCTTTTGCATGGAAATC-TTTTCTTTACCCTATTTTCCTTAAAATCAA
* * * * * *
139002 AGTTCATCCCTTAAAAAAGATAAGCTTCATTTCTCATAACAGTCTCTATTCCTTTAGGGATTGGG
324 AGTTCATCCCTTAAATAAGACAAGCTTCA-TTCTCGTAACAGTCTCCATTCTTTTA-AGATTGGG
* * *
139067 AACCTAAAACA-ACTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTTGCAAGAAAAGC
387 AACCTAAAACACA-TTCACTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGC
* * *
139131 TTTTTTTTTTCCACCGTTTTTGTT
451 --TTTTCTTTCCACCATTTTTGAT
* ** * * * * *
139155 AGAATGAAAGTTTAACTCTTAAAAAAGATAAAGC-CGAATACTTATACTAATCTCCATTTTTTTT
1 AGAATCAAAGTTTGCCTCTTAAAAAAGACAAA-CATGAATACTCATACTAATCCCCA-TTCTTTT
* * * * **
139219 CTAGATTAGGCACCATAAACATAGT-TTCTCTTTAGGATACACGATATTGACACTTTGGTTTTGC
64 C-AGATTAGGCACTATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGC
* * * *
139283 AAGAAAGGCTTTCTTT-CCACCAATTTTGGGAAAGTCTACGTTCGTGCCTCAAATAAGACAAACA
128 AAGAAAGGCTTT-TTTCCCA-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACA
* * *
139347 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGCCACCATAAACACATTCTCGTCATTAG
191 TGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAG
* * * *
139412 GAAAAATGATATTGATGATTTTTTTTTGCATGGAAATGTTTTCTTTGCCCTATTTTCCTTAAAAT
256 GATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAAT
* * * *
139477 CAAAGTTTATCCCTTAAATAAGACAAGCATTGATTCTCGTAACAGTTTTCATTCTTTTCAAGATT
321 CAAAGTTCATCCCTTAAATAAGACAAGC-TTCATTCTCGTAACAGTCTCCATTCTTTT-AAGATT
* * * * * * *
139542 GGGAACCTAAAACGCAATCCCTTCTTTAAGATACATGACATTGA-TGTTTGGTGTCGTAAGAAAA
384 GGGAACCTAAAACACATTCACTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAA
* * *
139606 GTTTTTCCTTT-CACCGTTTTTGAA
449 GCTTTT-CTTTCCACCATTTTTGAT
* * * *
139630 AGAATAAAAGTTTATCC-C-TAAAATACA-ACAAACATAAATAGTCATACTAATCCCCATTCTTT
1 AGAATCAAAGTTT-GCCTCTTAAAA-A-AGACAAACATGAATACTCATACTAATCCCCATTCTTT
139692 TCAAGATTAGGCATCT-TAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTT
63 TC-AGATTAGGCA-CTATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTT
* * * * * *
139756 GCAAGAAAGGGTTTCTTT-CTACCAATTTTTTTAAAATCTAGGTTCGTACCTCAAATGAGACAAA
126 GCAAGAAAGGCTTT-TTTCCCA-CAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAA
* * * * * *
139820 CATGGAATCTAGCAAAGATGTTCATTCATTTTGTGATTAGGCTCTATAAAAACATTCTCCTCATT
189 CATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATT
* * *
139885 AGGGA-AAACGATATTGATGATTTT-TTTT-TATGTGAAAATCTTTTCTTTACCTTATTTTCCTT
254 A-GGATAAATGATATTGATGATTTTCTTTTGCATG-G-AAATCTTTTCTTTACCCTATTTTCCTT
* * * * * * * * *
139947 CAAATCAAAATTCATTCCTTAAATAAGAAAAACATTGATTCTTGTAACAGACTCCATTTTTTTCA
316 AAAATCAAAGTTCATCCCTTAAATAAGACAAGC-TTCATTCTCGTAACAGTCTCCATTCTTTT-A
* * * *
140012 AGATTGGGAAGCC-AAAACACATT-TCTTCCATTAAGATACATGACATTGA-TGTTTGGTGTCAC
379 AGATTGGGAA-CCTAAAACACATTCACTT-CATTAGGATACATGACATTGATTCTTTGGTGTCGC
* *
140074 AAGAAAAGCTTTTCTTTCTACCATTTCTGAT
442 AAGAAAAGCTTTTCTTTCCACCATTTTTGAT
* *
140105 AGAATCAAAGTTTGTCC-CTTAAATAAGACAAACATGAATACTTATACTAATCCCCATTCTTTTC
1 AGAATCAAAGTTTG-CCTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTC
* * * **
140169 AGGATTGGGCACTGT--A-A-A--C-TC-C-TTAGGATACATGATATTGATGCTTTGGTTTCCCA
65 A-GATTAGGCACTATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGCA
* * *
140225 AGAAAGGCTTTTTTCACACTAATTTTTGTAAAGTCTAAGGTCATGTCCT-AAATGAGACAAACAT
129 AGAAAGGCTTTTTTCCCAC-AATTTTTGTAAAGTCTAAGTTCGTG-CCTCAAATGAGACAAACAT
* * *
140289 GGATTCTAGTAATGATCTTCATTCATTTTGTAATTTGGCACTATAAACACATTCTCCTCGTTAGG
192 GGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGG
* * *
140354 ATAAATGATATTGATGATTTTCTTTTGCATGAAAACCTTTTCTTTACCCTATTTTCATTAAAATC
257 ATAAATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATC
* * *
140419 AACA-TTCATCCCTTAAATAAGACAAGCATTGATTCACGTAACCA-TCTCCATTCATTTCAAGAT
322 AA-AGTTCATCCCTTAAATAAGACAAGC-TTCATTCTCGTAA-CAGTCTCCATTC-TTTTAAGAT
* * * **
140482 TAGGAACC-AAAAGCATATTTC-CTTCATTAGGATAAATGACATTGATGT-TTTGGTGTCAAAAG
383 TGGGAACCTAAAA-CACA-TTCACTTCATTAGGATACATGACATTGAT-TCTTTGGTGTCGCAAG
*
140544 AAAAACTTTTCTTTCCACCATTTTTGAT
445 AAAAGCTTTTCTTTCCACCATTTTTGAT
*
140572 AGAGTCAAAGTT
1 AGAATCAAAGTT
140584 CATCCCTCAA
Statistics
Matches: 2436, Mismatches: 355, Indels: 137
0.83 0.12 0.05
Matches are distributed among these distances:
465 13 0.01
466 250 0.10
467 68 0.03
468 6 0.00
469 1 0.00
471 1 0.00
472 5 0.00
473 266 0.11
474 198 0.08
475 824 0.34
476 402 0.17
477 146 0.06
478 250 0.10
479 6 0.00
ACGTcount: A:0.32, C:0.19, G:0.14, T:0.36
Consensus pattern (472 bp):
AGAATCAAAGTTTGCCTCTTAAAAAAGACAAACATGAATACTCATACTAATCCCCATTCTTTTCA
GATTAGGCACTATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGCAAG
AAAGGCTTTTTTCCCACAATTTTTGTAAAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGAT
TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAA
ATGATATTGATGATTTTCTTTTGCATGGAAATCTTTTCTTTACCCTATTTTCCTTAAAATCAAAG
TTCATCCCTTAAATAAGACAAGCTTCATTCTCGTAACAGTCTCCATTCTTTTAAGATTGGGAACC
TAAAACACATTCACTTCATTAGGATACATGACATTGATTCTTTGGTGTCGCAAGAAAAGCTTTTC
TTTCCACCATTTTTGAT
Found at i:141426 original size:159 final size:156
Alignment explanation
Indices: 141238--143400 Score: 621
Period size: 159 Copynumber: 13.7 Consensus size: 156
141228 GTAACAGTCT
* * * * *
141238 CCATTCTTTTTAGGATTGGGAACTATAAACACATTTCCTTCATTAGGATACATGACATTGATGCT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACATTTCC-TCATTAGGATACATGATATTGATGCT
* *
141303 TTGGTGTCGCAAGAAAAACTTTTCTTTCCACCATTTTTGCTAGAATCAAAGTTTTTCCTTTAAAT
65 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-GAATCAAAGTTTTT-CTTTAAAT
141368 AAGACAAACATGAATACTCATACTAATCC
128 AAGACAAACATGAATACTCATACTAATCC
* * * * *
141397 CCATTCTTTTCAGGATTTGGCACCATAAACATAGTCTACC-CCTTAGGATACATGATATCGATGC
1 CCATTCTTTTCAGGATTAGGCACCATAAACACA-T-TTCCTCATTAGGATACATGATATTGATGC
** * * * * *
141461 TTTAATTTCGCAAGAAAGGC-TTT-TTTCACACAAATTTTTG-TGAAGTCTAAGTTTGTGTC-TC
64 TTTGGTGTCGCAAGAAAAGCTTTTCTTTC-CAC-CATTTTTGATGAA-TCAAAGTTT-T-TCTTT
* * * * * *
141522 AAATGAGACAAACATGGATTCT-AGTAATGATCTT
124 AAATAAGACAAACATGAATACTCA-TACTAATC-C
* * * * * * *
141556 CGA-TCATTTT--GTAATTAAGCACTATAAACACATTGTGCTCATTAGGATAAATGATATAG-TA
1 CCATTC-TTTTCAG-GATTAGGCACCATAAACACATT-TCCTCATTAGGATACATGATATTGAT-
** * * * * * * * * *
141617 G-TTTTCTATTGCATGGAAATCTTTTCTTTTCC-CCATTTTAGATGAAATCAAAGTTCATCCCTT
62 GCTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCCACCATTTTTGATG-AATCAAAGTT-TTTCTTT
* * * * **
141680 AAATAAGACGAGCATCG-ATTCTCATAAC-AGTTT
124 AAATAAGACAAACAT-GAATACTCAT-ACTAATCC
* * * * * * * * *
141713 CCATTCTTTTCAAGAGTGGGAAGC-TAAA-ATGCATTTCTTTAATTAGGATACAAGACATTGATG
1 CCATTCTTTTCAGGATTAGGCACCATAAACA--CATTTC-CTCATTAGGATACATGATATTGATG
* * * *
141776 CTTTGGCGTCGCAAGAAAAGCTTTTTTTTCCACCATTTTTTATAGAATCAAAGTTTGTCTCTTAA
63 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-GAATCAAAGTTTTTCT-TTAA
*
141841 ATAAGACAAACATGAATACTTATACTAATCC
126 ATAAGACAAACATGAATACTCATACTAATCC
* * * * *
141872 CCAATCTTTTCAGGATTAGGCACCGTAAACATAGTTTTCTCGTTAGGATACATGATATTGATGCT
1 CCATTCTTTTCAGGATTAGGCACCATAAACACA-TTTCCTCATTAGGATACATGATATTGATGCT
* * * * * * * ** *
141937 TTGGTTTCCCAAGAAAGGC-TTT-TTTCACACCAATTTTTG-TAAAGTCTATGTTCGTGGTCTAA
65 TTGGTGTCGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTGATGAA-TCAAAGTT-TTTCTTTAA
* * * * * * *
141999 ATGAGACAAACAAGGATTCT-AGTAATGATCT
126 ATAAGACAAACATGAATACTCA-TACTAATCC
* * * * * * * *
142030 TCATTCATTTT--GTGATTAGGAACCATGAATACATTCTCCTCATTGGGATAAACGATAGTGATG
1 CCATTC-TTTTCAG-GATTAGGCACCATAAACACATT-TCCTCATTAGGATACATGATATTGATG
* ** * * * * * * * * * * *** *
142093 ATTTTCTTTTGTATGGAAATCTTTTACTTGCC-CTAGTTTCCTT-A-AAATCAATGTTCACCCCT
63 CTTTGGTGTCGCAAGAAAAGCTTTT-CTTTCCACCA-TTT--TTGATGAATCAAAGTT-TTTCTT
* * * * *
142155 TAAATAAGACAAACATCAATTCTCAAAATAATCT
123 TAAATAAGACAAACATGAATACTCATACTAATCC
* * * * * * * * ** *
142189 CTATTCTTTTTAAAGATTGGGAAGC-TAAAACGCATTCCCTTTTTTAGGATACATGATATTCATG
1 CCATTC-TTTTCAGGATTAGGCACCAT-AAACACATTTCC-TCATTAGGATACATGATATTGATG
* * *
142253 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACAATTTTTGAT-AAGTTCAAAGTTTGTCTCCTA
63 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATGAA--TCAAAGTTTTTCT-TTA
* *
142317 AATAAGACAAGCATGAATACTCATACTAATAC
125 AATAAGACAAACATGAATACTCATACTAATCC
* * * * * * *
142349 CCATTATTTTCTA-GATTAGGCACCGTAAACAAAGTCTTCC-CCTTAGTATACAAT-ATGTTAAT
1 CCATTCTTTTC-AGGATTAGGCACCATAAACACA-T-TTCCTCATTAGGATAC-ATGATATTGAT
** * * * * * *
142411 GCTTTAATTTCGCAAGAAAGGC-ATT-TTTCACACAAATTTTTG-TGAGGTCTAAGTTTGTGTC-
62 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTTC-CAC-CATTTTTGATGA-ATCAAAGTTT-T-TCT
* * * * * *
142472 TCAAATGAGACAAACATTG-ATTCT-AGTAATGATCTT
122 TTAAATAAGACAAACA-TGAATACTCA-TACTAATC-C
* ** * * * * * *
142508 CAATAGTTTT--GTAATTAGGTACTATAAACACATTTTGCTCAATAGGATAAATGATATT-AGTG
1 CCATTCTTTTCAG-GATTAGGCACCATAAACACA-TTTCCTCATTAGGATACATGATATTGA-TG
* ** * ** ** * * * * *
142570 ATTTTCTATTACGTGGAAATCTTTTCTTTTCC-CCATTTTCCTTA-AAATCAAAGTTTATCTCTT
63 CTTTGGTGTCGCAAGAAAAGCTTTTC-TTTCCACCATTTT--TGATGAATCAAAGTTTTTCT-TT
** * * *
142633 AAATAAGATGAGCATCG-ATTCTCATA--ACAGCC
124 AAATAAGACAAACAT-GAATACTCATACTA-ATCC
* * * *
142665 TCCATTCTTTTCAGGATTGGGAAGC-TAAA-ATGCATTCCCTTCATTAGGATACATGATATTGAT
1 -CCATTCTTTTCAGGATTAGGCACCATAAACA--CATTTCC-TCATTAGGATACATGATATTGAT
* * * * * * *
142728 GCCTTGGTGTCACAAGAAAAGCTTTTCCTTCCACCATTTTTTATAGAATTAGAGTTTGTCTCTTA
62 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGAT-GAATCAAAGTTTTTCT-TTA
142793 AATAAGACAAACATGAATACTCATACTAATCC
125 AATAAGACAAACATGAATACTCATACTAATCC
* * * *
142825 CCATTCTTTTTAGGATTAGGCACCGTAAACATAGTCTT-CTCCTTAGGATACATGATATTGATGC
1 CCATTCTTTTCAGGATTAGGCACCATAAACACA-T-TTCCTCATTAGGATACATGATATTGATGC
* * * * ** *
142889 ATTGGTTTCGCAA-AAAAGGC-TTT-TTTCACACCAATTTTTG-TAAAGTCTAAGTTCGTCTCCT
64 TTTGGTGTCGCAAGAAAA-GCTTTTCTTTC-CACC-ATTTTTGATGAA-TCAAAGTTTTTCT-TT
* * * * * * *
142950 ATATGAGACAAACATGGATTCT-AGTAATGATCT
124 AAATAAGACAAACATGAATACTCA-TACTAATCC
** * * * *
142983 TTATTCATTTT--GTGATTAGGCACTATAAACACATTCTCCTTATTAGGAAAAATGATATTGATG
1 CCATTC-TTTTCAG-GATTAGGCACCATAAACACATT-TCCTCATTAGGATACATGATATTGATG
* ** *** * * * ** * * *
143046 ATTTTCT-TTTAAATGGAAATCTTTTC-TGCC-CCTATTTTCCATAAAATCAATA-TTCATCCTT
63 CTTTGGTGTCGCAA-GAAAAGCTTTTCTTTCCACC-ATTTTTGAT-GAATCAA-AGTT-TTTCTT
* * * * * * *
143107 TACATAAGACAAGCATCAATTCTCGTAAC-AGTCT
123 TAAATAAGACAAACATGAATACTCAT-ACTAATCC
* * * * * * *
143141 CTATTC-TTTCAAAGATTAGGAAGC-TAAAGCACATTCCCTTCTTTAGGATAC-TGAAATTGATG
1 CCATTCTTTTC-AGGATTAGGCACCATAAA-CACATTTCC-TCATTAGGATACATGATATTGATG
* * *
143203 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCCTTTTTGAT-AAGTTCAAAGTTTGTCTCCTA
63 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATGAA--TCAAAGTTTTTCT-TTA
** * *
143267 AATAAGACAAGTACGAA-A-ACATACTAATCC
125 AATAAGACAAACATGAATACTCATACTAATCC
* * * *
143297 CTATTCCTTTT-AGGATTAGGCACCATAAACATAGTCTT-CTCCTTAGGATACATGATATTGATT
1 CCATT-CTTTTCAGGATTAGGCACCATAAACACA-T-TTCCTCATTAGGATACATGATATTGATG
* * * *
143360 CATTGGTTTCGCAACAAAGGC-TTT-TTTCACACCAATTTTTG
63 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTC-CACC-ATTTTTG
143401 TAAAGTCTAA
Statistics
Matches: 1432, Mismatches: 419, Indels: 308
0.66 0.19 0.14
Matches are distributed among these distances:
155 6 0.00
156 49 0.03
157 163 0.11
158 527 0.37
159 539 0.38
160 129 0.09
161 19 0.01
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (156 bp):
CCATTCTTTTCAGGATTAGGCACCATAAACACATTTCCTCATTAGGATACATGATATTGATGCTT
TGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATGAATCAAAGTTTTTCTTTAAATAAG
ACAAACATGAATACTCATACTAATCC
Found at i:141760 original size:475 final size:476
Alignment explanation
Indices: 140855--180119 Score: 20762
Period size: 473 Copynumber: 81.7 Consensus size: 476
140845 GGTATTTTTA
* * * * *
140855 CCACTATTTTTCATAGAATCAAAG-TTTGCCTCTTAAATAAGACAAACATGAATACACAAACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * * * *
140919 TCCCCATTCTTCTCAAG-TGTCGGCACCATAAACACAGTCTTCTCATTAGGATATAGGATATTGA
65 TCCCCATTCTTTTCAGGAT-TAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * *
140983 TGTTTTGGTTTCGAAAGAAAGGCATTTTTC-C-CCTTAATTTTTGTAAAGTTTAAGTTCGGGCCT
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACC--AATTTTTGTAAAGTCTAAGTTCGTGTCT
* * ** * *
141046 TAAATGAAACAAACATATATTCTAGTAATGATCTTCCTTCATTTTGGGATTAGGCACTATAAACA
192 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* * * * * *
141111 CATCCTCCTCTTTAGGATAAAAGATATTG-ATGATTTTCTTTTACATGGACATCTTTTCTTTGTC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
** * **
141175 CTATTTT-CGAAAAAACAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * *
141239 CATTCTTTTTAGGATTGGGAA-CTATAAACACATTTCCTTCATTAGGATACATGACATTGATGCT
386 CATTCTTTTCAAGATTGGGAAGCTA-AAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
*
141303 TTGGTGTCGCAAGAAAAACTTTTCTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
*
141330 CCACCATTTTTGCTAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * *
141395 CCCCATTCTTTTCAGGATTTGGCACCATAAACATAGTCTACCCCTTAGGATACATGATATCGATG
66 CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
** * * *
141460 CTTTAATTTCGCAAGAAAGGCTTTTTTCACACAAATTTTTGTGAAGTCTAAGTTTGTGTCTCAAA
131 CTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAA
* *
141525 TGAGACAAACATGGATTCTAGTAATGATCTTCGA-TCATTTTGTAATTAAGCACTATAAACACAT
196 TGAGACAAACATGGATTCTAGTAATGATCTTC-ATTCATTTTGTGATTAGGCACTATAAACACAT
* * * * * *
141589 TGTGCTCATTAGGATAAATGATATAGTAG-TTTTCTATTGCATGGAAATCTTTTCTTTTCCCCAT
260 TCTCCTCATTAGGATAAATGATATTGTAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTAT
*** * * *
141653 TTTAGATGAAATCAAAGTTCATCCCTTAAATAAGACGAGCATCGATTCTCATAACAGTTTCCATT
325 TTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * * * * *
141718 CTTTTCAAGAGTGGGAAGCTAAAATGCATTTCTTTAATTAGGATACAAGACATTGATGCTTTGGC
390 CTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGT
*
141783 GTCGCAAGAAAAGCTTTTTTTT
455 GTCGCAAGAAAAGCTTTTCTTT
* * *
141805 CCACCATTTTTTATAGAATCAAAGTTTGT-CTCTTAAATAAGACAAACATGAATACTTATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * *
141869 TCCCCAATCTTTTCAGGATTAGGCACCGTAAACATAGTTTTCTCGTTAGGATACATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* *
141934 GCTTTGGTTTCCCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTATGTTCGTGGTCT-A
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGT-GTCTCA
* * * * *
141998 AATGAGACAAACAAGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGAACCATGAATACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * *
142063 TTCTCCTCATTGGGATAAACGATAGTG-ATGATTTTCTTTTGTATGGAAATCTTTTAC-TTGCCC
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTT-CTTTGCCC
* * * * * * * * *
142126 TAGTTTCCTTAAAATCAATGTTCACCCCTTAAATAAGACAAACATCAATTCTCAAAATAATCTCT
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* ** * *
142191 ATTCTTTTTAAAGATTGGGAAGCTAAAACGCATTCCCTTTTTTAGGATACATGATATTCATGCTT
387 ATTC-TTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
142256 TGGTGTCGCAAGAAAAGCTTTTCTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
* * *
142282 CCACAATTTTTGATA-AGTTCAAAGTTTGTCTCC--TAAATAAGACAAGCATGAATACTCATACT
1 CCACCATTTTTGATAGA-ATCAAAGTTT-T-TCCTTTAAATAAGACAAACATGAATACTCATACT
* * * * * *
142344 AATACCCATTATTTTCTA-GATTAGGCACCGTAAACAAAGTCTTCCCCTTAGTATACAAT-ATGT
63 AATCCCCATTCTTTTC-AGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATAC-ATGATAT
* ** * * * * *
142407 TAATGCTTTAATTTCGCAAGAAAGGCATTTTTCACACAAATTTTTGTGAGGTCTAAGTTTGTGTC
126 TGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTC
* * * *
142472 TCAAATGAGACAAACATTGATTCTAGTAATGATCTTCAAT-AGTTTTGTAATTAGGTACTATAAA
191 TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA-TTTTGTGATTAGGCACTATAAA
* * * * * * *
142536 CACATTTTGCTCAATAGGATAAATGATATTAGT-GATTTTCTATTACGTGGAAATCTTTTCTTTT
255 CACATTCTCCTCATTAGGATAAATGATATT-GTAGATTTTCTTTTGCATGGAAATCTTTTCTTTG
* * * ** *
142600 CCCCATTTTCCTTAAAATCAAAGTTTATCTCTTAAATAAGATGAGCATCGATTCTCATAACAGCC
319 CCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTC
* * *
142665 TCCATTCTTTTCAGGATTGGGAAGCTAAAATGCATTCCCTTCATTAGGATACATGATATTGATGC
384 TCCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGC
* * *
142730 CTTGGTGTCACAAGAAAAGCTTTTCCTT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * *
142758 CCACCATTTTTTATAGAATTAGAGTTTGT-CTCTTAAATAAGACAAACATGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
*
142822 TCCCCATTCTTTTTAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * *
142887 GCATTGGTTTCGCAAAAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTCTC-CTA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC-A
* *
142951 TATGAGACAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTAGGCACTATAAACACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * **
143016 TTCTCCTTATTAGGAAAAATGATATTG-ATGATTTTCTTTTAAATGGAAATCTTTTC--TGCCCC
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTG-CCC
* * * * *
143078 TATTTTCCATAAAATCAATA-TTCATCCTTTACATAAGACAAGCATCAATTCTCGTAACAGTCTC
322 TATTTTCCTTAAAATCAA-AGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * *
143142 TATTC-TTTCAAAGATTAGGAAGCTAAAGCACATTCCCTTCTTTAGGATAC-TGAAATTGATGCT
386 CATTCTTTTC-AAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
143205 TTGGTGTCGCAAGAAAAGCTTTTCTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
* * ** * *
143232 CCACCCTTTTTGATA-AGTTCAAAGTTTGTCTCC--TAAATAAGACAAGTACGAA-A-ACATACT
1 CCACCATTTTTGATAGA-ATCAAAGTTT-T-TCCTTTAAATAAGACAAACATGAATACTCATACT
* *
143292 AATCCCTATTCCTTTT-AGGATTAGGCACCATAAACATAGTCTTCTCCTTAGGATACATGATATT
63 AATCCCCATT-CTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATT
* * *
143356 GATTCATTGGTTTCGCAACAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTC-
127 GATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* *
143420 CTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTAATTTGGCACTATAAAC
192 C-AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAAC
** *
143485 ACATTCTTTTCATTAGGAAAAATGATATTGATA-ATTTTCTTTTGCATGGAAATCTTTTCTTTGC
256 ACATTCTCCTCATTAGGATAAATGATATTG-TAGATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* ** * **
143549 CCTATTTTCATTCGAATTAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTTGTAACAGTCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* ** ** * * * *
143614 TCATTCTTTT-AAGGATTAAGAAGCCGAAACGTAATCCCTTCTTTAGGATACATAACATTGATGC
385 CCATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGC
* *
143678 TTTGGTGTTGCAAGAAAAGTTTTTCTTT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
143706 CTACCATTTTTCATAAAATCAAAGTTTTT-TTTCCTAAATAAGACAAAC-T---T--GCAT--GA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTT--TAAATAAGACAAACATGAATACTCATACTA
* * * * *
143762 AT-CCCATTCTTTTCCGGATTAGGCACCGTAAACAAAGTCCTCTCATTAGGATACACGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * * *
143826 TGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAGTTCGGGCCTTA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * *
143891 AATGAGGCAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACTGTAATCAC
194 AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACAC
* * ** * * *
143955 -TTTTCTTTTTTAGGATAAATGAGATTGATA-ATTTTCTTTTGCATGAAAATCTTTTATTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTG-TAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * *
144018 TATTTTCCTTAAAATCAATGTTTATTCCTTAAATAA-A-AAGGGCATCCATTTTCATAACAGTCT
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAA--GCATCGATTCTCATAACAGTCT
* * * * * *
144081 CCATTCTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTAGGAGACATG-CTGTTGATGC
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGAC-ATTGATGC
* * *
144145 TTTGTTGTCCCTTAA-AAAAGACAAGGATTGAATCTTAT
449 TTTGGTGTCGC--AAGAAAAG-C-----TT--TTCTT-T
* * * ** * * * *
144183 AAGAGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAACG-CATTCCATTCATTCGAATG-CATGA
1 -----CCACCA-T-TTTT---GA-T-AGAA--TCAAA-GTTTTTCCTTTAAAT--AA-GACA-AA
* * * * * * ** * ** **** * * *
144246 CATTG-ATGCTTTCGTGTCGAAAGAACAGCTTTTCTTTCCACCATTTTTTTTACAG-AATCAAAG
47 CA-TGAATAC--TCAT-AC--TA-ATC-CCCATTCTTTTCAGGA--TTAGGCACCGTAAACATAG
* * * * ** * * * ** ** * *
144309 TTTATCTCTTAAATAAGAAAAACAAAAATACTCATACTAATCCCCATTCTTT-TTATGATTAGGC
102 TCT-TCTCCT---T-AG-GATAC-ATGATATTGATGCT--T-----TGGTTTCGCAAGA-AAGG-
** ** * * * * * * * ** *
144373 ACCATTAACATAGTCTTCACA-TTTTGATACACGATATTGATGCTTTAGTTTCGTAAAAAAAGGC
151 -CTTTTTTCACA--C--CA-ATTTTTG-TA-AAG-T-CT-AAG--TTCGTGTC-TCAAATGAGAC
* *** * * * * * *
144437 ATTTTACCCACCAATTTTTGTAA--AGC--C--TAAGTTTGTGCCTTAAACGAGACAAAC-ATGG
202 A----A-ACATGGATTCTAGTAATGATCTTCATTCATTTTGTG-ATT--A-G-G-C--ACTAT--
** * * * * * *** * * *
144495 ATTCTTATAATGATCTTCACTCATCTTGTGAT-TACGCACCATAACACATTTTCCTCATTAGGAT
252 AAAC--A-CAT--TC-TC-CTCAT-TAG-GATAAATG-A-TATTGTAGATTTT-CT--TTTGCAT
* ** *** * ** ** * ***
144559 --AAATGAC-ATT-GATGATTTTTTTTCCATGGAAATC--TTTTCTTTGCCCCATATTCCTTGAA
303 GGAAAT--CTTTTCTTTGCCCTATTTTCC-TTAAAATCAAAGTTC-AT--CCC---TTAAAT-AA
* * * *
144618 -ATCAAAGTCCATCCCTTAACTAAGACAAGCATCGATTATCATAATAGTCTCTATTCTTTTCGAG
358 GA-C-AAG--CATC--------------------GATTCTCATAACAGTCTCCATTCTTTTCAAG
* * * * ** ** * *
144682 ATTGGGAACCAAAAACACCTTCATTTCACCAAGAGACATGACATTGATGCTTTGGTGTCGCAAG-
399 ATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGA
*
144746 AAAGCCTTTTCTTC
464 AAAG-CTTTTCTTT
** * * * *
144760 CCACGGTTTTTGATACAATCAAGGTTTATCTTTTAAGA-AAGACAAACATGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTAA
* * ** *
144824 TCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * *
144889 GCTTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* *
144954 ATAACG-CAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACA
195 ATGA-GACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * *
145018 TTTTCCTCATTAGGATAAATGATATTG-ATGA-TTT-TTTTCCAAGGAAATCCTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * * * * * *
145080 ATTTTCCTTAAAATCAAAGTTAATACCTTAGAAGACATGATATCGAAGCTTTGGTGTCGCAAAAG
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTA-AATA-A-G--A-C-AAGCATCGAT-TCTCATAA-
* * * * ** * * ** * *
145145 AAG-CT---TT-TTTTCCCATGATAAT-TGATAG--AACCAAGGTTTGTCTCTTAAGAAAGACAA
379 CAGTCTCCATTCTTTT--CAAGAT--TGGGA-AGCTAA--AACGCAT-TCCCTTCA-TTAG-GAT
* * * * *** * * * ** * *
145202 ACAAGAATACTCATACTAATCCCTATT-CT-TTTTAGGATTAGGC--ACCATA
434 ACATG---A--CAT--TGAT-GCT-TTGGTGTCGCAAGA-AAAGCTTTTCTTT
** ** * * * * * *** ** **
145251 AAAATAGTCTTCTT-ATTAGTATCTATGATATTGATGCTTTGGTTTTG-C--A-A-GAA-AGGC-
1 CCACCA-T-TT-TTGA-TAGAATCAAAG-T-TT-TTCCTTTAAATAAGACAAACATGAATACTCA
* * * * * * ** * * * ** **
145308 T-TTTATCCCAGCAATTTTTTTAAAG-TCTAAGTTCGTGTCTTAA-ATGAGACAAGCGTGGATTA
59 TACTAATCCC--C-ATTCTTTTCAGGAT-TAGGCAC-CG--TAAACAT-AGTC-TTC-T-CCTTA
* * * * ** * ** *
145370 -TAGTA-ATGAT-TTCATTCATTTTGTGATTAT-GCACCAAAAACACATTCTTTTCATTAGGAAA
113 GGA-TACATGATATTGATGC--TTTG-G-TT-TCGCA--AGAAAGGC-TT-TTTTCA-CACCAAT
** ** ** * ** * * * * * *
145431 AATAATATTGAT-GATTTTC-T-TTTC-CATG-GA-AATCTTTTCTGCCCTATTTTCCTTCG-AA
167 TTTTGTAAAG-TCTAAGTTCGTGTCTCAAATGAGACAAAC----ATG---GA--TT-C-TAGTAA
* ** * ** ** * * * *
145489 TCAAAGTTCATATC-TTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTC-CATTAAAG
220 T-GATCTTCAT-TCATT--TTGTGATTAG--GC-A--CT-ATAA-A--C-ACATTCTC-CT---C
* * * * * *
145552 ATTAGGAAGCCAAAACGCAATCCTTTCCTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGA
267 ATTAGG-A---TAAATG--AT--ATT------G-T--A--G-ATT--T--TCT--T-TTGCATGG
* ** *** * *
145617 AAAGCTTTTCTTTTTACC-ATTTTTGATAAAATCAAAGTTTATTTCC-TAAATAAGACAA--A-C
305 AAATCTTTTC-TTTGCCCTATTTTCCTTAAAATCAAAGTTCA-TCCCTTAAATAAGACAAGCATC
* * * ** * * * ** * *
145677 --TT-GCACAA-A-TC-CTATTCTTTTCCGGATTAGGCATCGT-AAACAAAGTCTTCTT-ATTAG
368 GATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGC-TAAAACGCATTC-CCTTCATTAG
* * * * * *
145734 GATACATGATATTGACGCTTTGGTTTTGCAAGAAAGGC-TTTCTTC
431 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * *
145779 CCACCAATTTT-AGTA-AAGTCTAAGTTCATGCC-TTAAA-AGAGACAAACATGAATTCT-AGTA
1 CCACCATTTTTGA-TAGAA-TCAAAGTT-TTTCCTTTAAATA-AGACAAACATGAATACTCA-TA
* * *** * * * * * * *
145839 ATGATTATCATTCATTTT--GTGATTAGGCGCCATAAACACATTCTCCTCATTAGGATAAATGAT
61 CTAATCCCCATTC-TTTTCAG-GATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGAT
* ** * * ** ** * * * *
145902 ATTGATGATTTTTTTTC-CATGGAATTCTTTTCTTTGC-CCTATTTTCCT-TAAAATCAAAGTTA
124 ATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTCACACCAATTTT--TGTAAAGTCTAAGTTC
* ** * * * * * * * * * *** * *
145964 ATCCCTTAAAT-AAATAAGCATCGATTTTCGTAA-AAGTCTCCATTC-TTTCCAAGATTGGGAAC
186 GTGTCTCAAATGAGACAAACATGGATTCTAGTAATGA-TCTTCATTCATTT-TGTGATTAGGCAC
* * * * * * * * * * ** * *** *
146026 TA-AAATCCCCTTCACTTCCTTGGGAGACATGACATTG-ATGCTTTGGTGTTGCAACAAAAGCTT
249 TATAAA-CACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTT
* *** * * ** * * **
146089 TTCTTT-CCACCATTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAAGACATA-CAT-GAATAAT
312 TTCTTTGCC-CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACA-AGCATCG-ATTCT
* * * * * * * * ***
146151 GATAATAATC-CTCATTCTTTTTAAGGTTAGGCAGC-ATAAC-CATAGTCTTCACATTAGGATAC
374 CATAACAGTCTC-CATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTT--CATTAGGATAC
** * * * * * *
146213 ACCATACTGATGCTTTGGTCTCGCAAGAAAGGCATTT-TTC
436 ATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * * * *
146253 CCACCAATTTTTGA-A-AAGCTAA-TTTGTGCC-TTATATGAGACAAACATGGATTCTTATAATT
1 CCACC-ATTTTTGATAGAATCAAAGTTT-TTCCTTTAAATAAGACAAACATGAATACTCATACTA
** * * ** * * *
146314 ATCTTCATTCATTTT--GTGATTACGCACCATAACACAT--TCCCCTCATTAGAATAAATGATAT
64 ATCCCCATTC-TTTTCAG-GATTAGGCACCGTAA-ACATAGTCTTCTCCTTAGGATACATGATAT
*** ** * ** * * *
146375 TGACAATTTTCTTTTC-CACAGAAA-TCTTTTCTTTGC-CCTATTTTCCT-TGAAA-TCAAAATT
126 TGA-TGCTTTGGTTTCGCA-AGAAAGGCTTTT-TTCACACCAATTTT--TGT-AAAGTCTAAGTT
* ** * * * * * * * * * ** *
146435 CATCCCTTAAATAAGATAAGCATCGATTCTCA-TAA-CAGTCTCCATTCTTTTTGAGATGGGGAA
185 CGTGTCTCAAATGAGACAAACATGGATTCT-AGTAATGA-TCTTCATTCATTTTGTGATTAGGCA
* * * * * * * *** * * * *
146498 CCAAAAACACCTCCACTTCATTAGGA-AACATGATATTG-ATGCTTCGGTGTCGCA-AGAGAAGC
248 CTATAAACACATTCTCCTCATTAGGATAA-ATGATATTGTA-GATTTTCTTTTGCATGGA-AATC
** *** * * * *
146560 TTTT-TTT-CTCACGGTTTTTGATAAAATC-AAGGTCTATCTCTTAAGA-AAGACAAACA-AGAA
310 TTTTCTTTGC-C-CTATTTTCCTTAAAATCAAAGTTC-ATCCCTTAA-ATAAGACAAGCATCG-A
* * * * * * ** * *
146620 TACTCAT-ACTAATC-CCTATTCTTTTCAGGATTAGGCA-CCATAAACATAGT-CTTCTCATTAG
370 TTCTCATAAC-AGTCTCC-ATTCTTTTCAAGATTGGGAAGCTA-AAACGCATTCCCT-TCATTAG
* * * * * * * *
146681 GATCCATGATATTGATGCTTTGGTTTTGCAGGAAAGGCTTTT-ATC
431 GATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * ** * *
146726 CCACAAATTTTTG-TA-AAGTCCAAGTTCGTGT-C-TCAAATGAGACAAACCTGGATTTTAATAA
1 CCAC-CATTTTTGATAGAA-TCAAAGTT--TTTCCTTTAAATAAGACAAACATGAATACTCATAC
* ** * * * * * * ** * *
146787 TGATCTTCATTCATTTT--GTGATTAGGCACCATAAATACATTCTTTTCATTATAAAAAATGATA
62 TAATCCCCATTC-TTTTCAG-GATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATA
* ** * * * * * ** * *
146850 TTGATGATTTTCTTTTGCATGGAAA-TCCTTTTT-GC-CTTATTTTCCT-TCGAA-TCAAAGTTC
125 TTGATGCTTTGGTTTCGCA-AGAAAGGCTTTTTTCACACCAATTTT--TGT-AAAGTCTAAGTTC
* ** * * * * *
146910 ATCCCTTAAA-GAAGATAAGCATCGATTCTAGTAAT-AGTC-TCAATTC-TTTTAAG-GATTAAG
186 GTGTCTCAAATG-AGACAAACATGGATTCTAGTAATGA-TCTTC-ATTCATTTT--GTGATTAGG
* * ** * * * * * * ** * * * *
146970 AAGCCA-AAATGCAATCTCTTCTTTAGGATACATGACATTG-ATGCTTTGGTGTTGCAAGAAAAG
246 CA-CTATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAAT
* ** * *
147033 CTTTTGTTT-CTACCGT-TTTT-GATAAAATCAAAGTTTATTTCC-TAAATAAGACAA--A-C--
309 CTTTTCTTTGC--CC-TATTTTCCTTAAAATCAAAGTTCA-TCCCTTAAATAAGACAAGCATCGA
* * * ** * * * *
147089 TT-GCATGA-A-TCT-GATTCTTTTCTGGATTAGGCA-CTGTACAGAAAGTC-TT--C-TCTTTA
370 TTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGC--TA-A-AACG-CATTCCCTTCATTA
* * * * *
147145 GGATACACGATATTGATGCTTTGGTTTCACAAGAAAAGC-TTTCTTC
430 GGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * * * *
147191 CCACCAATTTT-AGTA-AAGCCTAA-TTTCGGGCC-ATAAATGAGACAAACATGGATTCT-AGTA
1 CCACCATTTTTGA-TAGAA-TCAAAGTTT--TTCCTTTAAATAAGACAAACATGAATACTCA-TA
* * *** * * * *
147251 ATGATTATCATTCGTTTT--GTGATTAGGCACCGTAACCACT-TTCCCTT-T-TTTAGGATAAAT
61 CTAATCCCCATTC-TTTTCAG-GATTAGGCACCGTAAACA-TAGT--CTTCTCCTTAGGATACAT
* ** * * ** ** * * *
147311 GATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGC-CCTATTTTTCTTAAAGTCAAAGT
121 GATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTT-TTCACACCAATTTTT-GTAAAGTCTAAGT
* * * * * **** ** * * * * ** * *
147375 TCAT-CCCCTAAATAAAAGGGGCATCCATTTTCGTAA-CAGTCTCCATTC-TTTTAAAGAATGGG
184 TCGTGTCTC-AAATGAGACAAACATGGATTCTAGTAATGA-TCTTCATTCATTTT-GTGATTAGG
* * * * * * * * * ** * * * * *
147437 ATACTA-AAACGCATTC-CCTTCTTTAGGAGACATGCTGTT-AATGCTTTGGTGTCGTAAGAAAA
246 -CACTATAAACACATTCTCC-TCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAA
* * * ** * * *
147499 ACTTTTGTTT-CTACC-ATTTT--TTATAGAACCAAAGTTTGTCTC-T-AA-AAGACAAAC-TTG
308 TCTTTTCTTTGC--CCTATTTTCCTTA-A-AATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
* * *** * * ** * ** *
147556 AATACTCAT-ACTAATC-CCTATTCTTTTTGGGATTAGGTA-CT-GTATGCATAGTCTTTTCTTT
369 -ATTCTCATAAC-AGTCTCC-ATTCTTTTCAAGATTGGGAAGCTAAAACGCAT--TCCCTTCATT
* * * * * * * *
147617 AGGATACACGATATTGATGTTTTGGTTTTGCAAGAAAGGCATTT-TTC
429 AGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * ** *
147664 CCACCAATTTTTTTG-TA-AAGCATAACTTCGTGCC-ACAAATGAGACAAACATGGATTCTAAAC
1 CCACC-A--TTTTTGATAGAATCA-AAGTT-TTTCCTTTAAATAAGACAAACAT-G------AA-
* * * *
147726 GTGGATTTCCTAAATAAGATGAACTTGCATGAATCCCATTCTTTTCCGGATTAGGCACCGTAAAG
53 -T--A----CT-CAT-A-CT-AA--T-C------CCCATTCTTTTCAGGATTAGGCACCGTAAAC
* * * * * * *
147791 AAAGTCTTCTCCTCAGGATACACGGTATTGATGCTTTGATTTCGCAAGAAAGGCTTTCTTCCCAC
98 ATAGTCTTCTCCTTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACAC
* * * * * *
147856 CAGTTTTAGTAAAGCCTAAGTTCGTGCCTTAAATGATACAAACATGGATTCTAGTAATGAT-TAT
163 CAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAATGATCT-T
* * ** * * ** *
147920 CATTTATTTAGTGATTAGGCACCGTAACCACTTTCTCCTTTTTAGGATAAACGA-ATT-TGATGA
227 CATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGT-A-GA
** * * *
147983 TTTTCTTTTGCATTAAAATCTTTTATTTGCCCTATTTT-TTTAAAATCAAAGTTCATCCCCTAAA
290 TTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAA
* * ** * * * *
148047 TAA-AAAAGGCATCTATTCTTGTAACAGTCTCCATTCTTTTAAAGAATGGGATGCTAAAACACAT
355 TAAGACAA-GCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACGCAT
* * * * * *
148111 TCCCTTCTTTAGGAAACATG-CTGTTGATGCTTTGGTGTCGTAAGAAAAACTTTTGTTT
419 TCCCTTCATTAGGATACATGAC-ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* ** * * *
148169 CTACCGCTTTTGATAAAATCAAAGTTTATTTCC--TAAATAAGACAAAC-T---T--GC--ACGA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * **
148224 AT-CCCATTCTTTTTC-GGATTAGGCACCGTAAACAAAGTCTTCTCATTGGGATACACAATATTG
64 ATCCCCATTC-TTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * *
148287 ATGCTTTGGTTT-GCAAGAAAGGCTTTCTTTC-CACTAATTTTAGTAAAGTCTAAGTTCGTGCCT
128 ATGCTTTGGTTTCGCAAGAAAGGCTTT-TTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * ** *
148350 TAAATGAGACAAACATAGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAACC
192 CAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAAC
* ** * **
148414 ACTTTCTCCTTTTTAGGATAAATGATATTG-ATGATTTTCTTTTGCATGAAAATCTTTTAATTGC
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* * * *** ** *
148478 CTTATTTTCCTTAACATCAAAGTTCATTCCC-TAAATAAAAGGGGCATATATTCTCGTAACAGTC
320 CCTATTTTCCTTAAAATCAAAGTTCA-TCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTC
* * * * * * ***
148542 TCCATTCTTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTTGGAGACATGTTGTTGATG
384 TCCATTC-TTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATG
* * * *
148607 CTTTGGTGTTGTAAGAAAAACTTTTGTTT
448 CTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
148636 CTACCATTTTTAATAGAACCAAAGTTTGT-CTCT-AA-AAGAAAAACTTGAATACTCATACTAAT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * ** * * * *
148698 CCCCATTCTTTTTC-GGATTATGTATCATATGCATAGTCTTCTCATTATGATGCACGATATTGAT
66 CCCCATTC-TTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * * * *
148762 GCTGTGGTTTTGAAAGAAAGACATTTTTCCCACCAACTTTTTGTAAAGCCTAACTTCGTGCCTCA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAA-TTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * * * * * * *
148827 ACTGAGACAAATATGGATTCCAGTAATGATCCTCATTCGTTTTGTGCTTAGGTACGATAAACACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * *
148892 TTCCCCTCATTAGGAAAAATGATATTG-ATGATTTTCTTTTGCGTGGAAATCTTTTC-TT-CCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * * * *
148954 ATTTTACTTCAAACCAAAGTTCATCCCATAAATAAGACAAGGATCGATTCTTATAACAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * *
149019 TTATTTTGAAGATTGAGAAGCGAAAATGCATTCCCTTCATTAGGATGCATGACATTGATGCTTTG
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTG
*
149084 GTGTTGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * **
149108 CCACCATTTTTTACAAAATCAAA-TTTTAT-CTCTTAAATAAGACAAACACAAATACTCATACCT
1 CCACCATTTTTGATAGAATCAAAGTTTT-TCCT-TTAAATAAGACAAACATGAATACTCATA-CT
* * * * * * ** * *
149171 -ATCCCCATTCTTTTTAGGATCAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTA
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * ** * * * *
149235 ATGCTTTAGTTTCGCAAAAAAAGGCATTGCTCACACCAATTTTTGAAAAGCCTAAGTTTGTGCCT
128 ATGCTTTGGTTTCGC-AAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * *
149300 CAAATGAGACAAACATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AAC
192 CAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAAC
* * * * *
149363 ACATTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGC
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* * * ** * *
149425 CCTATTTTTCTTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCGATTCTCATAAGAGTCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * ** * *
149490 CCATTCTTTTCGAGATTGGGAA-CCAAACACACCTTTACTTCATTAGGAGACAAGACATTGATGC
385 CCATTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGC
* *
149554 TTCGGTGTC-CTAAG-AAAGCCTTTTCTTC
449 TTTGGTGTCGC-AAGAAAAG-CTTTTCTTT
*** * * * * * * *
149582 CCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTGAGA-AAGACGAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTT-AAATAAGACAAACATGAATACTCATACTAA
** * * ** * *
149646 TCCATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* ** * * *
149711 GCTTTGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* *
149776 ATGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
* * * *
149841 TCTCCTTGA-TAGGATAAATGATATTG-ATGATTTTCTTTTCCACGAAAATCTTTTCTTTGCCCT
260 TCTCC-TCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * *
149904 ATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * *
149969 TTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCTTT
*
150033 GGTCTCGCAAGAAAAGCTTTTCTTT
452 GGTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * * *
150058 TCACCATTTTTGATAGAATC-AAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCC-TTTAAATAAGACAAACATGAATACTCATACTAA
* * * * * *
150122 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * *
150187 GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * * * *
150252 ATAAGACAATCATGGGTTCTTA-CAATGATCTTCATTCATTTTGTGATTATG--CTAGATAACAC
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATA-AACAC
* * * * * *
150314 TTTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * *
150376 TATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAATAGTCTCC
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * * * *
150441 ATTCTTTTCGAGATTGGGAA-CCAAACACACCTTCACATCATTAGGAGACAAGACATTGATG-TT
387 ATTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
* *
150504 CGGTGTC-CTAAG-AAAGCCTTTTCTTC
451 TGGTGTCGC-AAGAAAAG-CTTTTCTTT
*** * * * * * *
150530 CCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTAAGA-AAGACGAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTAA
** * * ** * *
150594 TCCATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* ** * * *
150659 GCTTTGGTTTTGCAAGAAAGGCTTTTAGCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* *
150724 ATGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
** * * *
150789 TCTCCTTGTTAGGATAAATGATATTG-ATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTA
260 TCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * *
150853 TTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCAT
324 TTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * * * * *
150918 TCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTG
389 TCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCTTTG
*
150982 GTCTCGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * * *
151006 TCACCATTTTTGATAGAATC-AAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCC-TTTAAATAAGACAAACATGAATACTCATACTAA
* * * * * *
151070 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * *
151135 GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * * * ** *
151200 ATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGGGATTATGCAAGAT-AACACT
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
151263 TTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * *
151325 ATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAACAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * *
151390 TTCTTTTCGAGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACAAGACATTGATG-TTC
388 TTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
* *
151453 GGTGTCACAAG-AAAGCCTTTTCTTC
452 GGTGTCGCAAGAAAAG-CTTTTCTTT
*** * * * * * * *
151478 CCAAGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGA-AAGACGAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTT-AAATAAGACAAACATGAATACTCATACTAA
* * * * ** *
151542 TCCCTATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTTTTATTAGGATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * ** * * * *
151607 GCTTCGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTATGTTCATGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * *
151672 ATAAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
** * * *
151737 TCTCCTTGTTAGGATAAATGATATTG-ATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTA
260 TCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * *
151801 TTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCAT
324 TTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * * * * *
151866 TCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTG
389 TCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCTTTG
*
151930 GTCTCGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * *
151954 TCACCATTTTTGATAGAATC-AAGGTTTTCCACTTAAGGAAGACAAACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCC-TTTAAATAAGACAAACATGAATACTCATACTAA
* * * *
152018 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * * *
152083 GCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * ** *
152148 ATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACGAT-AACACA
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
152211 TTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * *
152273 ATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * *
152338 TTCTTTACGAGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
* * *
152402 GGTGTTGCAAGAGAAGCTTTTCTTC
452 GGTGTCGCAAGAAAAGCTTTTCTTT
** * * * *
152427 CCACGGTTTTTAATAGAATC-ATGTTTTGT-CTCTTAAGA-AAGACAAACAAGAATACTGATACT
1 CCACCATTTTTGATAGAATCAAAGTTTT-TCCT-TTAA-ATAAGACAAACATGAATACTCATACT
*** * * * * * *
152489 AATCATTATTCTTTTCAGGATTAGGCACCATAACCATAGTCTTCTCATTAGAATCCGTGATATTG
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * * * * *
152554 ATGCTTCGGTTTTGCAAGAGAGGCTTTTATCCCACCAGTTTTTGTAAAGTCTCATTTCGTGTCTC
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* *
152619 AAATGAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGCA
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAA-CA
* ** * *
152683 CATTATTTTCTTTAGGAAAAATGATATTG-ATGATTTTCTTTTGCATGGAAAT-TTTTC--TGCC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
** * *
152744 CTATTTTCCTTTGAATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * * *
152809 CATTC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGCT
386 CATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
* *
152873 TTGGTGCCACAAGAAAAGCTTTTCTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * *
152900 CTACCATTTTTGATAAAATCAAAGTTTATTTCC--TAAATAAGACAAAC-T---T--GC--ACGA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * ** * * *
152955 AT-CCCATTCTTTATCA-GATTAGGCAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATTG
64 ATCCCCATTCTTT-TCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * *
153018 ATGCTTTGGTTTCACAAGAAAGGCTTTCTTC-CTACCAATTTTAGTAAAGTTTAAGTTCGTGCCT
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCAC-ACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * * *
153082 TAGAA-GAGACAAATATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAA
192 CA-AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAA
* *
153145 CACATTCT-CTCCACTAGGATAAATGATATTG-ATGATTTTCTTTTCCATGGAAATCTTTTCTTT
255 CACATTCTCCT-CATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTT
* * * * *
153208 GCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCGATTCTCGTAAAAGT
318 GCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGT
* * * * * * ** * * *
153273 CTCCATACTTTCCAAGATTAGGAA-CCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGAC
383 CTCCATTCTTTTCAAGATTGGGAAGCTA-AAACGCATTCCCTTCATTAGGATACATGACATTGAT
*
153337 GCTTTGGTGTCGCATGAAAAGCTTTTCTTT
447 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * * * *
153367 CCGCCATTTATGATAGAATCAAGGTTTGTCTTTTAAGTATGACATACATGAATAATCATAATAAT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * *
153432 CCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCGCATTAAGATACACGATATTGATG
66 CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
* * * * * * *
153497 CTTTGGTCTCGCAAGAAAGGCATTTTTTC-CTCCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAA
131 CTTTGGTTTCGCAAGAAAGGC-TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * *
153561 ATAAGACAAACATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AACACA
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
153624 TTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * ** * *
153686 ATTTTTCTTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * ** * * *
153751 TTCTTTTCGAGATTGGGAA-CCAAACACACCTTTACTTCATTAGGAGACAAGACATTGATGCTTC
388 TTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
*
153815 GGTGTC-CTAAG-AAAGCCTTTTCTTC
452 GGTGTCGC-AAGAAAAG-CTTTTCTTT
*** * * * * * * *
153840 CCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTGAGA-AAGACGAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTT-AAATAAGACAAACATGAATACTCATACTAA
** * * ** * *
153904 TCCATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* ** * * *
153969 GCTTTGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * *
154034 ATGAGACAAACGTGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
* * * *
154099 TCTCCTTGA-TAGGATAAATGATATTG-ATGATTTTCTTTTCCACGAAAATCTTTTCTTTGCCCT
260 TCTCC-TCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * *
154162 ATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * *
154227 TTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCTTT
*
154291 GGTCTCGCAAGAAAAGCTTTTCTTT
452 GGTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * * *
154316 TCACCATTTTTGATAGAATC-AAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCC-TTTAAATAAGACAAACATGAATACTCATACTAA
* * * * * *
154380 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * *
154445 GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * * * *
154510 ATAAGACAATCATGGGTTCTTA-CAATGATCTTCATTCATTTTGTGATTATG--CTAGATAACAC
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATA-AACAC
* * * * * *
154572 TTTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * *
154634 TATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAATAGTCTCC
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * * * *
154699 ATTCTTTTCGAGATTGGGAA-CCAAACACACCTTCACATCATTAGGAGACAAGACATTGATG-TT
387 ATTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
* *
154762 CGGTGTC-CTAAG-AAAGCCTTTTCTTC
451 TGGTGTCGC-AAGAAAAG-CTTTTCTTT
*** * * * * * *
154788 CCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTAAGA-AAGACGAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTAA
** * * ** * *
154852 TCCATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* ** * * *
154917 GCTTTGGTTTTGCAAGAAAGGCTTTTAGCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* *
154982 ATGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
** * * *
155047 TCTCCTTGTTAGGATAAATGATATTG-ATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTA
260 TCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * *
155111 TTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCAT
324 TTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * * * * *
155176 TCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTG
389 TCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCTTTG
*
155240 GTCTCGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * * *
155264 TCACCATTTTTGATAGAATC-AAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCC-TTTAAATAAGACAAACATGAATACTCATACTAA
* * * * * *
155328 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * *
155393 GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * * * ** *
155458 ATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGGGATTATGCAAGAT-AACACT
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
155521 TTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * *
155583 ATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAACAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * *
155648 TTCTTTTCGAGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACAAGACATTGATG-TTC
388 TTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
* *
155711 GGTGTCACAAG-AAAGCCTTTTCTTC
452 GGTGTCGCAAGAAAAG-CTTTTCTTT
*** * * * * * * *
155736 CCAAGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGA-AAGACGAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTT-AAATAAGACAAACATGAATACTCATACTAA
* * * * ** *
155800 TCCCTATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTTTTATTAGGATCCATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * ** * * * *
155865 GCTTCGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTATGTTCATGCCTCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * *
155930 ATAAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
** * * *
155995 TCTCCTTGTTAGGATAAATGATATTG-ATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTA
260 TCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * *
156059 TTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCAT
324 TTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * * * * *
156124 TCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTG
389 TCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCTTTG
*
156188 GTCTCGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * ** * *
156212 TCACCATTTTTGATAGAATC-AAGGTTTTCCACTTAAGGAAGACAAACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCC-TTTAAATAAGACAAACATGAATACTCATACTAA
* * * *
156276 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACATGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * * *
156341 GCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * ** *
156406 ATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACGAT-AACACA
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
156469 TTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * *
156531 ATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * *
156596 TTCTTTACGAGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
* * *
156660 GGTGTTGCAAGAGAAGCTTTTCTTC
452 GGTGTCGCAAGAAAAGCTTTTCTTT
** * * * *
156685 CCACGGTTTTTAATAGAATC-ATGTTTTGT-CTCTTAAGA-AAGACAAACAAGAATACTGATACT
1 CCACCATTTTTGATAGAATCAAAGTTTT-TCCT-TTAA-ATAAGACAAACATGAATACTCATACT
*** * * * * * *
156747 AATCATTATTCTTTTCAGGATTAGGCACCATAACCATAGTCTTCTCATTAGAATCCGTGATATTG
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * * * * *
156812 ATGCTTCGGTTTTGCAAGAGAGGCTTTTATCCCACCAGTTTTTGTAAAGTCTCATTTCGTGTCTC
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* *
156877 AAATGAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGCA
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAA-CA
* ** * *
156941 CATTATTTTCTTTAGGAAAAATGATATTG-ATGATTTTCTTTTGCATGGAAAT-TTTTC--TGCC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
** * *
157002 CTATTTTCCTTTGAATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * * *
157067 CATTC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGCT
386 CATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
* **
157131 TTGGTGCCATAAGAAAAGCTTTTCTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * *
157158 CTACCATTTTTGATAAAATCAAAGTTTATTTCC--TAAATAAGACAAAC-T---T--GC--ACGA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * ** * * *
157213 AT-CCCATTCTTTATCA-GATTAGGCAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATTG
64 ATCCCCATTCTTT-TCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * *
157276 ATGCTTTGGTTTCACAAGAAAGGCTTTCTTC-CTACCAATTTTAGTAAAGTTTAAGTTCGTGCCT
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCAC-ACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * * *
157340 TAGAA-GAGACAAATATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAA
192 CA-AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAA
* *
157403 CACATTCT-CTCCACTAGGATAAATGATATTG-ATGATTTTCTTTTCCATGGAAATCTTTTCTTT
255 CACATTCTCCT-CATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTT
* * * * *
157466 GCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCGATTCTCGTAAAAGT
318 GCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGT
* * * * * * ** * * *
157531 CTCCATACTTTCCAAGATTAGGAA-CCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGAC
383 CTCCATTCTTTTCAAGATTGGGAAGCTA-AAACGCATTCCCTTCATTAGGATACATGACATTGAT
*
157595 GCTTTGGTGTCGCATGAAAAGCTTTTCTTT
447 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * * * *
157625 CCGCCATTTATGATAGAATCAAGGTTTGTCTTTTAAGTATGACATACATGAATAATCATAATAAT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
* * * * * *
157690 CCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCGCATTAAGATACACGATATTGATG
66 CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
* * * * * * *
157755 CTTTGGTCTCGCAAGAAAGGCATTTTTTC-CTCCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAA
131 CTTTGGTTTCGCAAGAAAGGC-TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * * *
157819 ATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AACACA
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
157882 TTTTTCTCAATAAGATAAATGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * *
157944 ATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * *
158009 TTCTTTACGAGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
* * *
158073 GGTGTTGCAAGAGAAGCTTTTCTTC
452 GGTGTCGCAAGAAAAGCTTTTCTTT
** * * *
158098 CCACGTTTTTTAATAGAATC-AAGTTTTGT-CTCTTAAGA-AAGACAAACAAGAATACTGATACT
1 CCACCATTTTTGATAGAATCAAAGTTTT-TCCT-TTAA-ATAAGACAAACATGAATACTCATACT
*** * * * *
158160 AATCATTATTCTTTTCAGGATTAGGCACCAT-AACAATAGTCTTCTCATTAGAATACGTGATATT
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAAC-ATAGTCTTCTCCTTAGGATACATGATATT
** * * ** * * *
158224 GATGCTTCAGTTTTGCAAGATAGGCTTTTAACCCACCAGTTTTTGTAAAGTCTAATTTCGTGTCT
127 GATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* *
158289 CAAATGAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGC
192 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAA-C
* ** * *
158353 ACATTATTTTCTTTAGGAAAAATGATATTG-ATGATTTTCTTTTGCATGGAAAT-TTTTC--TGC
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
** * *
158414 CCTATTTTCCTTTGAATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * * * *
158479 CCATTC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGC
385 CCATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGC
*
158543 TTTGGTGTCACAAGAAAAGCTTTTCTTT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * ** *
158571 CTACCATTTTTTATAAAATCAAAGTTTATTTCC--TAAATAAGACAAAC-----T--T-GGACGA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * ** * * *
158626 AT-CCCATTCTTTATCA-GATTAGGTAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATTG
64 ATCCCCATTCTTT-TCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * *
158689 ATGCTTTGGTTTCACAAGAAAGGCTTTCTTC-CTACCAATTTTAGTAAAGTCTAAGTGCGTGCCT
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCAC-ACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * *
158753 TAGAA-GAGACAAACATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAA
192 CA-AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAA
* * * * *
158816 CACATTCT-CTCCACTGGGATAAATGATATTG-ATGATTTTTTTTTCCTTGGAAATCTTTTCTTT
255 CACATTCTCCT-CATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTT
* ** * * *
158879 GCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAGTTAAGACAAGGATCGATTCTCGTAAAAGT
318 GCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGT
* * * * * ** * * *
158944 CTCCATTCTTTCCAAGATTAGGAA-CCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGAC
383 CTCCATTCTTTTCAAGATTGGGAAGCTA-AAACGCATTCCCTTCATTAGGATACATGACATTGAT
* *
159008 GCTTTAGTGTCGCATGAAAAGCTTTTCTTT
447 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * * *
159038 CCGCCATTTGTGATAGAATCAAGGTTTGT-CTCTTAAGTATGACATACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * * *
159102 TCCGCTTTCTTTTCAAGATTAGGCACCAG-AAACATAGTCTTCGCATTAAGATACACGATATTGA
65 TCCCCATTCTTTTCAGGATTAGGCACC-GTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * *
159166 TGCTTTGGTCTCGCAAGAAAGGCATTTTTTC-CTCCAATTTTTGTAAAGCCTAAGTT-GTGCCTT
129 TGCTTTGGTTTCGCAAGAAAGGC-TTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * ** *
159229 AAATGAGACAAACATGGACTCTTA-TAACGATCTTCATTCATTTTGTGATTACACACCAT-AACA
193 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* *
159292 CATTCTCCCCATTAGGATAAATGATATTG-ATGATTTTCTTTT-CTATGAAAATCTTTTCTTTGC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGC-ATGGAAATCTTTTCTTTGC
* * * * *
159355 CCTATTTTTCTTGAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTTTAATACCAGTCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * * * * *
159420 CCATTCTTTTCGAGATTGGGAACCAAAAACAC-CTCCACTTCATTAGGAAATATGATATTGATGC
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCC-CTTCATTAGGATACATGACATTGATGC
* * *
159484 TTTGGTGTCGCAAGAGAAGCTTTTATTC
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
** * * * *
159512 CCACGGTTTTTGATAGAATC-AAGATTTATCCTTTAAGA-AAGACAATCAAGAATGCTCATACTA
1 CCACCATTTTTGATAGAATCAAAG-TTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTA
* * * * * *
159575 ATCCCTATTCTTTTC-GAGATTAGGCACCATAAACATAGTATTCTCATTAAGATCCATGATATTG
64 ATCCCCATTCTTTTCAG-GATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * *
159639 ATGCTTTGGTTTTGCGAGAAAGGCTTTTTCCCCACCAATTTTTGCAAAGTCTAAGTTCGTGTCTC
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
** *
159704 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCGTAAATAC
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
** * * *
159769 ATTCTTTTCATTAGGAAAAATGTTATTG-ATGATTTTCTTTTGCGTGGAAATC-TTT-TTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
** * * *
159831 TATTTTCCTTCGAATCAAAGTTCATTCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCT
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * *
159896 ATTCTTTT-AAGGATTAGGAAGCTAAAACGCAATCCCTTCTTTAGGATACATGACACTGATGCTT
387 ATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
* *
159960 TGGTGTCGCAAGAAAAACTTTTGTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
159986 CTACCATTTTCT-ATAGAACCAAAGTTTGT-CTCT-AA-AAGGCAAACTTGAATACTCATACTAA
1 CCACCATTTT-TGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAA
* ** * * ** * **
160047 TCCCTATTCTTTTTTGGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACGCGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * *
160112 GCTTTGGTTTTGCAAAAAAGGCATTTTTCTCACCAATTTTTTGTAAAGCCTAACTTCGTGCCTCA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAA-TTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * * * *
160177 AATGAGGCAAACATGGACTCTAGTAATGATCTTCATTCATTTTGTGATTATGTACCATAAACACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * * *
160242 TTCCCCTCTTTAGGAAAAATGATATTG-ATGATTTTCTTTTACATGAAAATGTTTTC--TGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * * ** *
160304 ATTTTCCTTCAAACCAAAGTTTATCCCTTAAATAAGACAAGGATTTATTCTTATAACAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* *
160369 TTCTTTTAAAGATTGAGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTG
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTG
160434 GTGTCGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * **
160458 CCACCATTTTTTACAAAATCAAAGTTTAT-CTATTAAATAAAACAAACACGTTTACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * ** * * * ** * *
160522 TCCCCATACTTTTTACGATTAGGCACTATTAACATAGTCTTCACATTTTGATGCACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * *
160587 GCTTTAGTTTCGCAAAAAAAGG-TATTTTTC-CTACCAATTTTTGTAAAGCCTAAGTTTGTGCCT
130 GCTTTGGTTTCGC-AAGAAAGGCT-TTTTTCAC-ACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * * *
160650 TAAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTATGCACCAT-ATC
192 CAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAAC
* * *
160713 ACATTTTCCTCATTAGGATAAATGATTTTG-ATGA-TTT-TTTTCCATGGAAATCTTTT-TTTGC
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* * * * * * *
160774 CCTATTTTCCTTGAAATCGAAGTTCATCCCTAAAACAAAACAAGCATCGATTCTCATAATAGTCA
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * * * * * *
160839 CCATTTTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTGGGAGACATGACATTGATGCT
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
*
160904 TTGGTGTCGTAAG-AAAGCCTTTTC-TT
450 TTGGTGTCGCAAGAAAAG-CTTTTCTTT
* * * * * * * *
160930 CTCACGATTTTTGATACAATCAAGGTTTGTCTTTTAAGA-AAGACAAACACGAATATTTATACTA
1 C-CACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTA
* * * * * ** * **
160994 ATCCCTATTATTTTCAGGATTAAGCACCATAAACGTAGTCTTCTTATTAGGATCCACAATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * * *
161059 TGGTTTGGTTTTGCAAGAAAGGCTTTTATCCCACAAATTTTTGTAAAGTCTAAGTTCATGCCTCA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * *
161124 AATGAAACAAACATGGATTCTAGTAATGATCTTCATTCAATTTGTGATTAGGCACCATAAACACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * *
161189 TTCTTCTCATTAGGATAAAAGATATTG-ATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * **
161251 ATTTTCCTTGAAATCAAAGTTCATCCCTTAAACAAGACAAGCATTGATTCTCATAGTAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * * **
161316 TTCTTTTCGAGATTGGGAACCAAAAACACGTTCACTTCATTAGGAGACAAGACACAGATGCTTTG
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTG
* *
161381 GTGCCGCAAG-AAAGCCTTTTCTTC
453 GTGTCGCAAGAAAAG-CTTTTCTTT
**** * * * * * *
161405 CCTTGGTTTTTGATACAATCAAGGTTTGTCTTTTAAGA-AAGACAAACACGAATACTCATATTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTAA
* * * ** *
161469 TCCCAATTCTTTTCAGGATTAGGCACCATAAACATAGTCCTCTTATTAGGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* ** * * * * *
161534 GCTTTGGTTTCACAAGAAAGGCTTTCCTCCCACCAATTTTAGTAAAGTCTATGTTCGTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* **
161599 AAGAGACAAACATGGATTCTA-TAAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAAACAC
195 ATGAGACAAACATGGATTCTAGT-AATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACAC
* * * * *
161662 ATTCTACTCTTTAGGATAAA-GATATTG-ATGGTTTTCTTTTCCATGGAAATTTTTTCTTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * * * *
161725 TATTTTCCTTAAAATCAAAGTTAATCCCTTAAATAAGATAAGTATTGATTCTCGTAAAAGTCTCA
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * * *
161790 ATTCTTTCCAAGATTGGGAACCAAAAATC-CCTTCACTTCCTTAGGAGACATGACATTGATGCTT
387 ATTCTTTTCAAGATTGGGAAGCTAAAA-CGCATTCCCTTCATTAGGATACATGACATTGATGCTT
*
161854 TGGTGTCACAAGAAAAGCTTTTCTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * * *
161880 CCACCGTTTTTGGTAGAATCAAGGTTTGT-CTCTTAAGTAAGAC-AACCTGACTAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * *
161943 TCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTT-TGCATTAGGATACACGATATTGA
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCT-CCTTAGGATACATGATATTGA
* * ** * * * * * *
162007 TGTTTTAGTTTCATAAGAAAGGCATTTCTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* ** * *
162072 AATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCAATTTACGATTACGCACCAT-AACAC
194 AATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
* * *
162135 ATT-TCCTCATTGGGATAAATGATATTG-ATGACTTTCTTTTCCATGGAAATCTTTTCTTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * * *
162198 TATTTTCCTTGAAATCAAAGTTCATCCCTTAAACAAGACAAGCATTGATTCTCATAATAGCCTTC
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * * * *
162263 ATTCTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTAGGAAACATGACACTGATGCTTT
387 ATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
* * *
162328 GGTGTCGTAAG-AAAGCCTTT-TAT
452 GGTGTCGCAAGAAAAGCTTTTCTTT
* ** * * *
162351 CC-CCATGGTTTTTGATACAATTC-GGGTTTGTCTTTTAAGA-AAGACAAACACGAATACTCATA
1 CCACCA---TTTTTGATAGAA-TCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATA
* * * ** * **
162413 CTAATGCCTATTCTTTTCAGGATTAGGCACCATAAATGTTAGGATCTTGGTTTTGATATAACAAA
61 CTAATCCCCATTCTTTTCAGGATTAGGCACCGTAAA-CATA-G-TC----TTCTCCT-T-----A
* * * * ** ** * * * ** **
162478 GGATAGAATAAAATCGGAAATTATTTTGAAAATAC-CAA-AAATG-TGTTTT-A-TTCAA-TTAA
113 GGATA-CATGATAT-TG--A-TGCTTTG--GTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTT
*** * * * **
162537 GTACTTTATAAATT-TTGTAC-CAAATGATTTTTGATTCACCAA-ATGTTTTCTAGTTAA-G---
171 GTAAAGTCTAAGTTCGTGT-CTCAAATGA-----GA--CA--AACATGGATTCTAG-TAATGATC
** * * * * * ** * *
162595 -T-ATAAATGTTT-TCA--AGG--CTTTAAATGATTAATT-T-CTAAGTTAAAATATATCAAAGT
225 TTCATTCAT-TTTGTGATTAGGCACTATAAA-CA--CATTCTCCTCA-TTAGGATAAAT--GA-T
* * ** * * * * * * ** * *
162651 ATCGATACATAGGT-ATTTGTATCGATACAT-TAAGATTGACTTAG-GCTAAAATT-GTCAAAAC
282 ATTG-TAGAT-TTTCTTTTGCATGGA-A-ATCT----TT-TCTTTGCCCT-ATTTTCCTTAAAA-
* * * * * * * ** ** *
162712 CCTTAAATGTATCGAT-ACATGAA-AA-ATATGCATCGA-T-ACATGTCA-T-TGGGATTTCTTG
336 --TCAAA-GT-TC-ATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT-CCA-TTCTTT
* * * * * ** * * *
162770 GCAGTAGCTAAACTT-GTATCGATACACCAA-GTATGTATCGATACAATGTATCGATACATCAAA
394 TCA--AG----A-TTGGGA-AGCTA-A--AACGCA--T-TCCCTTC-AT-TA-GGATACAT--GA
* * *** * ** ** *
162833 AATTGTAT-CGATACAT-TGGCTTGTAACGGCTATAT-TTT
440 CATTG-ATGC-TTTGGTGTCGCAAG-AAAAGCT-TTTCTTT
* ** * * * * * ** * ** **
162871 CAAATATGTATCGATA-CATCAAAAATTGTAT-CGATACATTTG-C--ACGGGAA-A-TCATTAA
1 CCACCAT-TTTTGATAGAATC-AAAGTT-TTTCCTTTAAATAAGACAAACATGAATACTCA-T--
* * * ** **** * * ** * *
162929 AATAAGCTCCAAACAAGCCA--ATAACGGCTA--G-AAACTCCACTAATCAAACTCC-AATGGCT
60 ACTAATCCCCATTCTTTTCAGGATTA-GGC-ACCGTAAA---CA-TAGTC-TTCTCCTTA-GGAT
** * * * * ***** **
162988 ACAACAACATTGAAGCCTATAAATAAGAGCTTCCAGTAGCAAAACACAACAAGAGAGAAGTAGA-
117 AC-ATGATATTGATG-CT-T---T--G-G-TT----TCGC---A-A-GA-AAG-GCTTTTTTCAC
**** * * *
163052 ACCAA-GCAAG-AAACATCT-AGCATTCAAAGTTTTCAAAGATCAAAGTGTTTTATATTTTTCAA
161 ACCAATTTTTGTAAA-GTCTAAG--TTC---G-TGTC-----TCAAA-TG----AGA-----C-A
* * * * * ** * * * * * *
163114 AAGCTTTTG-TTCATATTGTTATTATTTTCTAAGC-TCTTTGT-ATT-TG-ATTTTGAGCTTAAA
203 AA-C-ATGGATTC-TA--GTAATGATCTTC-ATTCAT-TTTGTGATTAGGCACTATAAAC--ACA
* ** * * * ** * * * * * * *
163174 TTC-CCACA--AACACAAGCCTAGTTAGAGACAAACTTT-GTTTGTA-GAAAAATC-TTT-GTTG
259 TTCTCCTCATTAGGATAA--AT-GATATTG-TAGATTTTCTTTTGCATG-GAAATCTTTTCTTTG
* * ** * * * *** * * ** * *
163232 TCATATAAGGTTGT-GGTAAACCTTGAGAGAGAATCTCTTTGGAACTTGTGGTATAGTTCGCAAA
319 CCCTAT----TT-TCCTTAAA--ATCAAAGTTCATC-CCTT--AA-AT-AAG-ACA---AGC--A
** * * ***** * * ** ** ** * * * * * *
163296 GAGATTGTAAGGTTGGTATCTAAGCCCGTAAAAAATATGAGTTGTAAGGTTACAC-CTTTGCCTT
366 TCGATTCTCATAACAGTCTC-CATTCTTTTCAAGAT-TG-G--G-AAGCTAAAACGCATTCCCTT
* * * * * * ** * **** *
163360 -A-AAGGCA-ATCAAT-TCGATT-AGTGAATTGGGTAATCACTCGACAAG--GAAGTGT
425 CATTAGG-ATA-C-ATGAC-ATTGA-TG-CTTTGGT-GTCGCAAGAAAAGCTTTTCTTT
* ** ***** * *** ** * * * * * ** *
163412 CAAGGAGAGAGGACGTAG-GTGCCGTGTTTGGACC--GAACCTCTATA-AATATCTTGTGTCAAG
1 CCACCATTTTTGA--TAGAAT-CAAAGTTT-TTCCTTTAA-AT-AAGACAA-A-CATGAAT--AC
** * * * * * * * * *
163473 TTTTCCT--TCCCTAATCCCTTTTCA-AATTTGTTCAAAACCCGAAAATTCGAAAAGAACCAATT
56 TCATACTAATCCC-CAT-TCTTTTCAGGATTAG-GC---A-CCGTAAA--C--ATAG--TC--TT
* * * * *** * * * *
163535 CACCCCCCCTCTTGG-TTC--GTTACTTGATAAGCTTT-CAAT--AAACATAGTCTTCTTATT-A
106 -----CTCCT-TAGGATACATGATA-TTGAT--GCTTTGGTTTCGCAAGAAAGGCTT-TT-TTCA
* * * *** * *** * *
163593 GGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTA-AAG
160 -CA-CCA--AT-TT-TTG-TAAAG--TC-TAAG-TTCG-TGTC-T--CA--AA--TGAG-ACAA-
* * * ** ** *
163657 TCTAT-G-TTCGT-GCCTTAAAAGAGACAAACATGGATTCTAGAAGTGATTATCATTCATTTTGT
204 AC-ATGGATTC-TAG---T-AATGA-TC-TTCATTCATT-T---TGTGATT-------A----G-
* * * * *
163719 GATTAGGCATCGTAAACACATTCTCCTCTTTAGGATAAA-GATATTG-ATGA-CTT-TTTTCCAT
245 G--CA--C-T-ATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCAT
* *
163780 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAATAAGACAAGCTTC
303 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATC
* * * * * * * * * *
163845 GATTCTCGTAAAAGTCTCTATT-TTTTCCAATATTGGGAACCAAAAACCCCTTCACTTCCTTAGG
368 GATTCTCATAACAGTCTCCATTCTTTT-CAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGG
* *
163909 AGACATGACATTGATGCTTTAGG-GTCGCAAGAAATGCTTTTCTTT
432 ATACATGACATTGATGCTTT-GGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
163954 CCACCATTTTTGATAAAATCAAGGTTTGT-CTCTTAAGTACA-ATATACATGAATAATCATAAC-
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATA-AGACAAACATGAATACTCAT-ACT
** * * * * * *
164016 AATCCCCATTCTTTTCAATATTAGGCACCATAAACAGAGTCTTCACATTAGAATACACGATATTG
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * *
164081 ATGCTTTGGTTTCGCAAGAATA-GCATTTTTCTCACCAATTTTTGTAAAGCCTAAGTTTGTGCCT
128 ATGCTTTGGTTTCGCAAGAA-AGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * * *
164145 TAAATGAGACAAACATGGATTCTTGTAATGATCTTCATTCATTTTGTGATTACGCACCAT-AACA
192 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* *
164209 CATTCTCCTCATTAGGATAAGTGATATTG-ATGATTTTCTTTTTCATGGAAATCTTTTCTTTGCC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
*
164273 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTTTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * * * *
164338 CATTATTTTCCAGATTGGGAACCAAAAACAC-CTCCACTTCATTAGGAGAC-TGATATTGATGCT
386 CATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCC-CTTCATTAGGATACATGACATTGATGCT
* *
164401 TTGGTGTCGCAAGAGAAGCTTTT-TTCC
450 TTGGTGTCGCAAGAAAAGCTTTTCTT-T
* * * * * * *
164428 CCACGATTTTTGATAG-A--AAA-------C-TCAAGA-AAGACAAATACTCAAGAAGCT-TTTC
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACA-TGAA-TA-CTCATAC
* ** * ** ** * ** ** * * **
164480 T-TTCCACCATT-TTTTACAAAATCAAAGTTTATTTGTTAA-ATAAAACAAACACAATTACTCAT
62 TAATCC-CCATTCTTTT-CAGGAT--TAG-GCA-CCGTAAACAT-AGTC-TTCTC-CTTA-GGAT
* **** * ** ** * *
164542 AC-TAATCCCCATTCTTTTTAGGATTAGGCACCATTAA--CATAGTCTT--CA-C-ATTTTGATG
117 ACATGATATTGATGC--TTT-GG-TTTCGCA--AGAAAGGC-T-TTTTTCACACCAATTTT--TG
* * * * * * * ** * *
164600 CACGATA-T-TGATGCTTCAGTTTCGCAAA-AAAACATATTTTTCCCACTAAATTTTTGTAAAGC
172 TA--A-AGTCT-AAG-TTC-GTGTCTCAAATGAGACA-A------ACA-TGGATTCTAGT-AA--
* ** * * * ** ** * * ** * *
164662 CGAAGTT-TTTGCCTTAAATG-GAAGAAACATCGATTCTTATA-ATGTTCTTCATTCATTTTGCG
220 TGATCTTCATT-CATT--TTGTGATTAGGCA-C---T-ATAAACACATTC-TC-CTCA-TTAG-G
* * * *** ** * * *
164724 AT-TACGCACCATAACAGATTCTCCTCGTTAGGATCAAT-GATATTCATGATTT-TTTTCCATGG
273 ATAAATG-A-TATTGTAGATT-T--TC-TTTTG--C-ATGGA-AATC-T--TTTCTTTGCCCT--
* * ***** * * * *
164786 AAATCTT-TTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGCGAGCATCG
323 --ATTTTCCT-TAAAATCA----------------AAGTTCATCCCTTAAATAAGACAAGCATCG
* * * * * * *
164850 ATTCTCATAACAGTCTCTATTCTTTTCGAGGTTGGGAACCAAAAATAC-CA-TCACTTCGTTAGG
369 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGC-TAAA-ACGCATTCCCTTCATTAGG
* * * * *
164913 AGACATAATATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTC
432 ATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
*** * * * * * *
164958 CCATGGTTTTTGATAGAATCAAGGTTTGT-CTCTCAAGA-AAGACAATCAAGAATACTCATACAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACATGAATACTCATACTA
* * * * * *
165021 ATCCCTATTCTTCTT-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATCCATAATATAG
64 ATCCCCATTCTT-TTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * * *
165085 ATGTTTTGGTTTTGTAAGAAAGGCTTTTATC-CAACCAATTTTTATAAAATCTAAGTTCGTGTCT
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCAC-ACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
** * * *
165149 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCGGTCACTTTGTGGTTAGTAGC-C-ATAGA
192 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG--GCACTATAAA
** * * *
165212 CACATTCTTTTCAGTAGGAAAAATGATATTG-ATGATTTTCATTTGCATGGAAATCTTTTC--TG
255 CACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTG
** * ** *
165274 CCCTATTTTCCTTCGAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCGGAACAATC
319 CCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTC
* * * * * *
165339 TCCATTCTTTT-AAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAGGATACATGATATTGAGG
384 TCCATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATG
*
165403 CTTTGGTGTCACAAGAAAAGCTTTTCTTT
448 CTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * *
165432 CTACCGTTTTTGATAAAATCAAAGTTTATTTCC--TAAATAAGACAAAC-T---T--GC--ACAA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
** * * **
165487 AT-CCCATTCTTTTTTGAATTAGGCACCGTAAACAAAGTCTTCTTATTAGGATACATGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
** * * * * * * *
165551 TGCTTTGGTTTCTTAAGAAAGGCTTTCTTCCCACCAATTTTAGTGAAGTCTAAGTTCATGCCTTA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * * * *
165616 AAAGAGACAAACATAGATTCTAGAAATGAT-TATCTTTCATTTTGTGATTAGGCACCATAAACAC
194 AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACAC
* * *
165680 ATTCTCCTCATTAGGATAAATGATGTTG-ATGATTTTCTTTTCCATAGAAATCTTTTCTTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* * * * * * * *
165744 TATTTTCCCTAAAATCAAAGTTAATCCCTCAAATAAGACTAGCATCGATTCTCGTAAAAGTTTCA
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * * * ** *
165809 ATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGGCATGCCATTGATGCTTT
387 ATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
*
165874 GGTGTCGCAAAAAAAGCTTTTCTTT
452 GGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * * * *
165899 CCACCGTTTTTGATAGAATCAAGGTTTGT-CTCTTAAGTAGGACATATATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * *
165963 TCCCCATTCTTTTCAAGATTAGGCACCATAAGCATAGTCTTCACATTAGGATACATGATATTAAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * ** * *
166028 GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTTTGCCTTAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * * * ** *
166093 ATGAAAGAAACATGGATTCTTA-TAATGATTTTCTTTCATTTTGTGATTACACACCAT-AACACA
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * * *
166156 TTCACCTCGTTAGGATAAATGATATT-AACGATTTTCTTTTCCATGGAAATCTTTTCTTTGCACT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * *
166220 ATTTTTCTTAAAATCAAAGTTCATTCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCACCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * *
166285 TTCTTTTCGAGATTGCGAACCAAAAACAC-CTCCACTTCATTAGGAGACATGATATTGATGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCC-CTTCATTAGGATACATGACATTGATGCTTT
* *
166349 AGTGTCGCAAGAGAAGCTTTT-TTT
452 GGTGTCGCAAGAAAAGCTTTTCTTT
** * * * * * ** *
166373 CCCACGGTTTTTTATAGAATCAAGGTTTGT-CTCTCAAGA-AAGA-TAATTTAGAATACTCGTAC
1 -CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACAT-GAATACTCATAC
* * * * * ** *
166435 TAATCCCTATTCTTTTTAGGATTACGCACCATAAACCTAGTCTTCTAATTAGGATCCATGATATT
62 TAATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATT
* * * * *
166500 GATGCTTTGGTTTTGCAAGAAAGGCATTTTTTC-CACCAATTTTT-TATAGAGCCTTACTTCGTA
127 GATGCTTTGGTTTCGCAAGAAAGGC-TTTTTTCACACCAATTTTTGTA-A-AGTCTAAGTTCGTG
* *
166563 CCTCAAATGAGACAAACATGGATTCTAAACATTGATTCTAGTGATGATCTTTATTCATTTTGTGA
189 TCTCAAATGAGACAAACATGGATTCT----A--G----TA---ATGATCTTCATTCATTTTGTGA
* * * * * * ** *
166628 TTAGACACCATAAACACGTTCCCCTCATTAGGAAAAATGATATTG-ACAATTTTCTTTTGTGTGA
241 TTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGG
* * * * * *
166692 AAATCTTTTC--TACCCTATTTTCCTTCAAACCAAAGTTCATCGCATAAAAAAGACAAAG-ATCG
305 AAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGAC-AAGCATCG
* * *
166754 ATTCTTATAACAGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAACGCATTCCCTTCATTCA-GA
369 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATT-AGGA
* *
166818 TGCATGACATTGATGCTTTGGTGTCGTAAGAACAA-CTTTTCTTT
433 TACATGACATTGATGCTTTGGTGTCGCAAGAA-AAGCTTTTCTTT
* * * * ** * *
166862 CTACCATTTTTTTACAGAATCAAAGTTTAT-CTCTTAAATAAGACAAACACAAATACACAGACTA
1 CCACCA-TTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTA
* * * * * ** *
166926 ATCCCCATTCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * * * * * *
166991 TGCTTTAGTTTTGCTAAAAAATGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTT
129 TGCTTTGGTTTCGC-AAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * *
167056 AAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACCA-CAACA
193 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* * * * *
167119 CATT-TAACTCATTAGGATAAATGACATAG-ATGA-TTT-TTTTCCATGGAAATCATTTCTTTGC
257 CATTCT-CCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* * * * *
167180 CCCATTTTCCTTGAAATCAAAGTCCATCCCTTAAATAAGACAAGCATCGATTCTCATAATAGACT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
** * * * * * *
167245 CCATTCTTTTTGAGATTGGGAACCAAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCT
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
*
167310 TTGGTGTCGCAAG-AAAGCCTTTTCTTC
450 TTGGTGTCGCAAGAAAAG-CTTTTCTTT
** * * * * *
167337 CCACGGTTTTTGATACAATCAAGGTTTATCTTTTAAGA-AAGACAAACATGAAAACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTAA
** ** ** * * * *
167401 TCCTTATTCTTTTCAGGATTA-GCACCACAAACATAGTCTTCTTATTAGGATCCACGATATGGTT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * ** * * *
167465 GCTTTTGTTTTGCAAAAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCCCAA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
*
167530 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACATAT
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
* * * *
167595 TCTCCTCTTTAGGATAAATGATATTG-ATGATTCT-TTTTCCGA-GGAAATCCTTTCTTTGCCCT
260 TCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGC-ATGGAAATCTTTTCTTTGCCCT
* * ** *
167657 ATTTTCCTTAAAATCAAAGTTAATACCTTAAATAAGACAAATATCGATTCTCATAAAAGTCTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * * *
167722 TTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTCTTTAGGAGACATGACACTGATGCTTTG
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTG
*
167787 TTGTCGCAAGAAAAGCTTTTCTTT
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
167811 CCACCGTTTTTGATAGAATCAAGGTTTGT-CTCTTAAGTAAGACATACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * *
167875 TCCCCACTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACACATCACATTA
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAG---T--C--T----T---C-TC-C-TTA
** * * *
167940 GGATACACAATATTGAAGCTTTGG-TTCTGCAAGAAAGGCATTTTTCCCACCAATTTTT-TCAAA
113 GGATACATGATATTGATGCTTTGGTTTC-GCAAGAAAGGCTTTTTTCACACCAATTTTTGT-AAA
* * * * * *
168003 GCCTAAGTTTGTGCCTTC-AAGGACACAAACATGGATTCTTA-TAATCATCTTCATTCATTTTGT
176 GTCTAAGTTCGTGTC-TCAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGT
* * * * *
168066 GATTACGACACCAT-AACACATTCTCCTCGTTAGAATAAATGATATTG-ATGATTTTCTTTTCCA
239 GATTA-GGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCA
* * *
168129 TGGAAATCTTTTTTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCTTAAATAGGACAAGCAT
302 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCAT
* * * * *
168194 CGATTCTCATAACAGTCTCCATTCTTTTCGAGATTGGGAACCAAAAACAC-CTCCACTTCATTAG
367 CGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCC-CTTCATTAG
* * * * * *
168258 GAGACATGATATCGATGCTTTGGTGCCGCAAGCGAAA-CTTTTCTTC
431 GATACATGACATTGATGCTTTGGTGTCGCAAG-AAAAGCTTTTCTTT
* * * * * *
168304 CCTCGATTTTTGATCGAATCAAGGTTTGT-CTCTTAAGA-AAGACAAACACGAATACTCATACTA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACATGAATACTCATACTA
* * * * ** *
168367 ATCCCTATTCTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATCCATGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
** *
168432 TGCTTTGGTTTTACAAGAAAGGCTTTTATC-CACCCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACA-CCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * ** *
168496 AAATGAGATAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTAGGTGCCATAAACAC
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
** * *
168561 ATTCTTTTCTTTAGGA-AAATGATATTG-ATGATTTTCTTTTACATGGAAATCTTTTC--TGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
** * * *
168622 TATTTTCCTTCGAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTGTCGTAACAATCTCC
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * ** * * *
168687 ATTCTTTT-AAGGATTAGGAAGCCAAAATGCAATCATTTCTTTAGGATACAGGACATTGATACTT
387 ATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
168751 TGGTGTCGCAAGAAAAGCTTTTCTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
** * * * ** ** *
168777 TTATCGTTTTTGATAAAATCAAAGTTTATTTCC--TAAATAAGACAAAC-T-AGCACGAAATA-A
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATAC-TCATACT
** * * * * ** *
168837 AAT-CAAAGTT-TATTTCCTAAATAAGATAAACTTGCA-CG-AATCCCATTCTCTT-TCGGATTA
63 AATCCCCA-TTCT-TTT-C-----AGGAT-TA--GGCACCGTAA--ACATAGTCTTCTC--CTTA
* * *
168897 GGCACTGTAAATAAAGTCTTCTTATTAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAGG
113 GG-A---TACAT---G-----ATATT--GAT----GCT-TTG--G---T---TTCGCAAGAAAGG
* * * * * *
168962 CTTTCTTCCCACCAATTTTAGTAAAGTCTAAGTTCGTGCCTTAAAAGAGACAAACATGGATTCTA
151 CTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATGGATTCTA
* *
169027 GTAATGAT-TATCATTCATTTTGTGGTTAGGCACCATAAACACATTCTCCTCATTAGGATAAATG
216 GTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATG
169091 ATATTG-ATGATTTTCTTTTTCGCA---AAATTCTTTTCTTTGCCCTA-------T----T----
280 ATATTGTA-GATTTTC-TTTT-GCATGGAAA-TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAA
* * * *
169137 -TT--T--CTTAAATAAGACAAGTATCGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGA
341 GTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGA
* * * * * * *
169197 A-CTAAAAACCCCTTCACTTCCTTAGCAGACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCT
406 AGCT-AAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCT
169261 TTTCTTT
470 TTTCTTT
* * * * * * *
169268 CCATCATTTTTTATAGAATCAAGGTTTGTGT-C-TTAAGTAAGACATACATGAATAATCATAATA
1 CCACCATTTTTGATAGAATCAAAGTTT-T-TCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * * * * * * *
169331 ATCCCTAGTCTTTTCAAGG-TTAGGTAGCATAAACATAGTCTTCACATTAGGATAAATGATACTG
64 ATCCCCATTCTTTTC-AGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * * * * *
169395 ATGCTTTGGTCTCGCAAGAAAGGCATTTTTCCCACCAATGTTTGAAAAG-CTTAAATTTGTGCCT
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTC-TAAGTTCGTGTCT
* * * * * * *
169459 TATATGAGACAAACACGGATTCT--TATATTATCTTCATTCATTTTTTGATTATGCACCAT-AAC
192 CAAATGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTGATTAGGCACTATAAAC
* *
169521 ACATTCTCCTCATTAGGATAAATGATATTG-ATGATTTTCTTTTCCATGGATATCTTTTCTTTGC
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* * * * *
169585 CCTATTTTCCTTGAAATCGAAGTTCATCCCTTAAATAATATAAGCATCGATTCTCATAGCAGTCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* ** * * * * * * *
169650 CTATTCTTTTTGAGATTAGGAACCAAAAACAC-CTCCACTTCATTAGGAGACATGATATTGATGC
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCC-CTTCATTAGGATACATGACATTGATGC
* **
169714 TTTGGGGTCGCAAGCGAAGCTTTTC-TT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
** * * * * *
169741 CTCACGGTTTATGATAGAATCAAGGTCTAT-CTCTTAAGA-AAGACAAACAAGAATACTCATACT
1 C-CACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACATGAATACTCATACT
* * * * * * * *
169804 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATTGTCATCTCATTAGAATCCTTGATATTG
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * * * * * *
169869 ATGCTTCGGTTTTGCATGAAAGGCTTTTATCCCACTAATTTTTGTAATGTCCAAGTTCATGTCTC
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
** * *
169934 AAATGAGACAAACCCGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGGCACCT-TAAATA
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA-CTATAAACA
** * * * *
169998 CATTCTTTTCATTAGAAAAAAAAGA-ATTG-ATGATTTTCTTTTACATGGAAATCTTTTC--TGC
257 CATTCTCCTCATTAG-GATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* ** *
170059 CATATTTTCCTTCGAATCAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* ** * ** *
170124 CAATTCTTTT-AAGGATTAAGAAGCTGAAACGCAAACCCTTCTTTAGGATACATGACATTGATGC
385 CCATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGC
* *
170188 TTTGGTGTTGCAAAAAAAGCTTTTCTTT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
170216 CTACCGTTTTTGATAAAATCAAAGTTTATTTCC--TAAATATGACAAAC-T---T--GCAT--GA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * * * * * * *
170271 AT-CCCATTCTTTCCCGGATTAGGCAACGTAAACAAAGTTTTCTCATTAGGGTGCACGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * *
170335 TGCTTTGGTTTCACAAGAAAAGCTTTCTTC-CTACCAATTTTAGCAAAGTCTAAGTTCAG-GCCT
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCAC-ACCAATTTTTGTAAAGTCTAAGTTC-GTGTC-
* **
170398 TC-AATGAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACTGT-CG
191 TCAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAA
* ** * * *
170460 CAACTTTCTCCTTTTTAGGATAAATGATATTG-ATGAATTT-TTTTGCATGAAAATCTTTTATTT
255 C-ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTT
* * * *** * * *
170523 GCCCTATTTTTCGTAAAATCAAAGTTCATCCCTTAAATAAAAGGGGCATCCATTTTCGTAACAGT
318 GCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGT
* * * *
170588 CTCCATTCTTTTAAAGAATGGGATACTAAAACGGATTCCCTTCCTAAAACGGATTCCCTTCTTTA
383 CTCCATTCTTTTCAAGATTGGG-------AA--G---------CTAAAACGCATTCCCTTCATTA
* * * * * *
170653 GGAGACATG-CTGTTGATGCTTTGGTGTTGTAAGAAAAACTTTTGTTT
430 GGATACATGAC-ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
170700 CTACCATTTTTTATGGAACCAAAGTTTGT-CTTT-AA-AAGACAAACATGAATACTCATACTAGT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
* ** * * * ** * * *
170762 CCCTATTCTTTTTGGGACTAGGTACCATATGCATAGTCTTCTCATTAGGATACACGATATTAATG
66 CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
* * * * * * *
170827 CTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCCTTA
131 CTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAA--TTTTTGTAAAGTCTAAGTTCGTGTCTCA
* *
170892 AATGAGACAAACATGG-TTCTAGTAATGATCTTCATTCATTTTGGGATTAGGCACCATAAACACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * *
170956 TTC-CCTTTATTAGGA-AAAGTGATATTG-ATGATTTTCTTTTTCGTGTAAATCTTTTC--TGCC
259 TTCTCC-TCATTAGGATAAA-TGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * *
171016 CTATTTTCCTTCAAAA-CAAAGTTCATCCCATAAATAAGACAAGGACCTATTC-CTATAACAGTC
321 CTATTTTCCTT-AAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTC-ATAACAGTC
* * ** * *
171079 ACCATTCTTTTGAAGATTAAGAAGCTAAAATGCATTCCCTTCATTAGGATGCATGACATTGATGC
384 TCCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGC
**
171144 TTTGGCATCGCAAGAAAAGCTTTTCTTT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * **
171172 CCACTATTTTTTACAGAATTAAAGTTTAT-CTCTTAAATAAGGCAAACACAAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * * ** *
171236 TCCCCAATCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATTTTGAT-CTACGATATTGA
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATAC-ATGATATTGA
* * * * * * * * *
171300 TGCTTTAGTTTCCCAAAAAAAGGCATTTTTCGCACCAATTTTTGTCAAGCCTAAGTTTGTG-CCC
129 TGCTTTGGTTTCGC-AAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * *
171364 TAAATGAGACAAACATGGATTCTTA-TATTGATCTTCATTCATTTTGTGATTACGCACCAT-AAC
193 -AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAAC
* * * * *
171427 ACATTTTCCTCTTTAGGATAAAGGATATTG-ATGATTTATTTTTTCCATGGAAATCTTTTCTTTG
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTT-TCTTTTGCATGGAAATCTTTTCTTTG
* * * * * *
171491 TCCTATTTTCCTTGAAATCAAACTTCATCCCTTAAACAAGACAAGTATCGATTCTCATAATAGTC
319 CCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTC
* * * * * * * * * *
171556 TCCATTCTTTTCGAGAATGGGAACCAAAAACACCTTCACTACATTAGAAAACATGACATTGATGC
384 TCCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGC
*
171621 TTTGGTGTCGCAAG-AAAGCCTTTTCTTC
449 TTTGGTGTCGCAAGAAAAG-CTTTTCTTT
*** * * * * * * ** *
171649 CCATGGTTTTTAATACAATCAAGGCTTGT-CTTCTAAGA-AAGAAAAACACAAATACTCATCCTA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTT-TAA-ATAAGACAAACATGAATACTCATACTA
* * * ** *
171712 ATCCCTATTCTTTTCAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATCCATGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * *
171777 TGCTTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAGTCTAAGTTTGTGCCTCA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * *
171842 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTTATTTTGTGATTAGGCACCATGAACACA
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* *
171907 TTCTCCTTATTAGGATAAATGATATTG-ATGATTTTCTTCT--ATGGAAATCTTTTCTTTGCCCT
259 TTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* *
171969 ATTTTCCTTGAAATCAAAGTTCAT-CCTTCAAATAAGACAAGCATCGATTCTCATAATAGTCTCC
323 ATTTTCCTTAAAATCAAAGTTCATCCCTT-AAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * * * ** * *
172033 ATTTTTTTCGATATTGGGAACCAAAAACACCTTCTTTTGATTAGGAAACATGACATTGATGCTTT
387 ATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTT
*
172098 GGTGTCGCAAG-AAAGCTTTTTCTTC
452 GGTGTCGCAAGAAAAGC-TTTTCTTT
** * * * * *
172123 CCACGGTTTTTGATACAATCAAGGTTTGTCTTTTAAGA-AAGACAAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAA-ATAAGACAAACATGAATACTCATACTAA
* * * ** *
172187 ACCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * * * * *
172252 GCTTTGATTTAGCAATAAAGGATTTCTTCCCACTAATTTTAGTAAAGTCTAAGTTCATG-CTTTA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTC-TCA
**
172316 AAAAAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCT-TAAACA
194 AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCA-CTATAAACA
*
172379 CATTCTCCTCATTAGGATAAATGATATTGATA-ATTTT-TTTTCCATGGAAATCTTTTCTTTGCC
257 CATTCTCCTCATTAGGATAAATGATATTG-TAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * * * *
172442 CTATTTTCCTTAAAATCGAAGCTAATCCCTTAAATAAGACAGGCATCAATTCTCTTAA-ATGTCT
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACA-GTCT
* * * * * * * * *
172506 CCATTATTTCCAAGATTGGGAACCAAAAAC-CCTTCACTTCCTTAGGAGACATGACGTTGATGCT
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
172570 TTGGTGTCGCAAGAAAAGCTTTTCTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
172597 CTACCGTTTTTAATAAAATCAAGGTCTATTTCC--TAAATAAGACAAAC-T---T--GC--ACGA
1 CCACCATTTTTGATAGAATCAAAGT-T-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
** * * *
172652 AT-CTTATTCGTTTTC-GGATTAGGCACCGTAAACAAAGTCTTCTCATTTGGATACATGATATTG
64 ATCCCCATTC-TTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* * * * * * **
172715 ATGCTTTTGGTTTTGCAACAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTTTAAGTTCGTCCCT
128 ATGC-TTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCT
* * * ** *
172780 TAAATGAGACAAAAATAGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAATC
192 CAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAAC
* * ** * *
172844 ACTTTCTCTTTTTTAGGATAAATGATATTG-ATGATTTTCTTTTGCATGAAAATCTTTTATTTGC
256 ACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGC
* * * *** * * * *
172908 CTTATTTTCCTTAAAATCAAAGTTCATCCCCTAAATAAAAGGGGCATCTATTCTCGTAATAATCT
320 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * * * *
172973 CCATTCTTTTAAAGAATGGGATGCTAACACGCATTCCCTTCTTTAGGAGACATG-CTGTTGATGC
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGAC-ATTGATGC
* * * *
173037 TTTGGTGTTGTAAGAAAAACTTTTGTTT
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
173065 CTACCATTTTT-AGTAGAACCAAAGTTTGT-CTCT-AA-AAGAAAAACTTGAATACTCATACTAA
1 CCACCATTTTTGA-TAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAA
* * ** * ** * *
173126 TCCCCATTCTCTTTC-GGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACACAATGTTAA
65 TCCCCATTCT-TTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * *
173190 TGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCCT
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAA--TTTTTGTAAAGTCTAAGTTCGTGTCT
* *
173255 CAAATTAGACAAACATGGATTCTAAACAAGGATTCTAGTAATGATCTTTATTCATTTTGTGATTA
192 CAAA-T-G------A--GA--C-AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTA
* * ** *
173320 GGCACCATAAACACATTC-CCTTTATTAGGA-AAAGTGATATTG-ATGATTTTCTTTTGTGTGAA
244 GGCACTATAAACACATTCTCC-TCATTAGGATAAA-TGATATTGTA-GATTTTCTTTTGCATGGA
* * * * * * * *
173382 AATCATTTC--TGCCCTATTTTCCTTCAAACCGAAGTTCATCCCATAAATAAGGCAAGGATCGAA
306 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGAT
* ** *
173445 TC-CTATAACAGT-TGCCATTCTTTTGAAGATTAAGAAGCTAAAACGCATTCCCTTCGTTAGGAT
371 TCTC-ATAACAGTCT-CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGAT
* *
173508 GCATGACATTGATGCTTTAGG-GTTGCAAGAAAAGCTTTTCTTT
434 ACATGACATTGATGCTTT-GGTGTCGCAAGAAAAGCTTTTCTTT
* * * **
173551 CCACCATTTTTTACAGAATCAAAGTTTAT-CTCTTAAATAAGACAAACACAAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * *** * * *
173615 TCCCCATTCTTTTTAGGATTAGGCACCATCAACATAGTCTTCACATTTTAATACACGACATT-AA
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
** * ** * * ** *
173679 GCTTTTAATTTCGCAAAAAAAAACATTTTTCACACCAATTTTTGTAAAGCCTAAGTTTATGCCTC
130 GC-TTTGGTTTCGC-AAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* ** *
173744 AAATGAGGCAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACCAT-AACA
193 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* * ** * * *
173807 CATTTTTCTCATCGGGATAAAAGATATTG-ATGATTTT-TTTTCCATGGAAATCTTTTCTTTGCT
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* *** * * * *
173870 CTATTTTCCTTGAAATCAAAGTTCATCCAACAAACAAGACAAGCATCGATTCTTATAATAGCCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * * * *
173935 CATTCTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTTGGAGACATGACATTGATGCTT
386 CATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
* *
174000 TGGTGTCGAAAG-AAAGCCTTTTCTTC
451 TGGTGTCGCAAGAAAAG-CTTTTCTTT
** * * * * * *
174026 CCACGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGA-AAGACAAACACGAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTT-AAATAAGACAAACATGAATACTCATACTAA
* * * * ** *
174090 -CCCCTATTCCTTTCAGGATTAGGCAGCATAAACGTAGTCTTCTTATTAGGATCCATGATATTGA
65 TCCCC-ATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* ** * * * * * * *
174154 TGCTTTGGATTT-TCAAGAACACTCATAGTATTCTCTA-TACTTTTCAGGATTAGACA-CCATAA
129 TGCTTTGG-TTTCGCAAGAA-AGGC-T-TTTTTCAC-ACCAATTTT--TG--TA-A-AGTC-T-A
* * * * * * ** * * * * * * *
174216 ACATAGTCTTCTCTTTAGGATCCATGATATTGATGCTTTGGTTTTGTGAGAAAGGCT-TTTATCC
181 A-GT--TCGTGTC-TCA--A---ATGAGA--CAAAC-ATGG-ATTCT-AGTAATGATCTTCAT--
* * * *** * ** * *
174280 CATCAATTTT-TG--TA--AAGTCTAAGTTCGTGTCT-CAAATGA-GACAAACGTGGAT-TCTAG
230 --TC-ATTTTGTGATTAGGCACTATAAACACAT-TCTCCTCATTAGGATAAA--T-GATAT-T-G
** * * ** **** * * * * *
174337 TAG-TGATC--TT-CAT-----TCATTT-TGTG-ATTAGGCACCAT-AAA-CACA-TTCTTTTCA
286 TAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTC-ATCCC
* * * ** *
174388 TTAGAAAAAATGATATTG-AT-GATTTTCTTTTGCATGGAAATCTTTTCTTCCCTT-TTTTC---
350 TT--AAATAA-GACA-AGCATCGA--TTC---T-CAT---AA-C-AGTC-TCCATTCTTTTCAAG
* * * *** * * * *
174447 CTT-CGAATC-AAAGTTCA-TCCCTTAATTAAGATAAGCATCGATTCTCGTAACAGTCTCCATTC
399 ATTGGGAAGCTAAAACGCATTCCCTTCATTAGGAT----A-C-A---T-G--ACA-T-T-GATGC
* *
174509 TTTTAAGGAT-TAGGAAGCAAAAACGCTATCCCTTCTTTAGGAT
449 -TTT--GG-TGTCGCAAG--AAAA-GCT-T---TTC-TT----T
** * * ** * *
174552 ACATGACATTGATGCTTTTGTGTCACAAGAAAAGCTTTTCTTTCTACCGTTTTTAATAAAATCAA
1 -C----CA-CCAT--TTTTG-AT-AGAATCAAAG----T-TTT-T-CC--TTTAAATAAGA-C-A
* * * * * * *
174617 AGTTTATTTCCTAAATAAGACAAACTTGCATGAAT-CCTATTCTTTTCCGGATTAGGCACCGTAA
45 A----A---CATGAAT---AC--TCATAC-T-AATCCCCATTCTTTTCAGGATTAGGCACCGTAA
* * * * * *
174681 ACAAAGTCTTCTCATTAGGATACATGGTATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCC
96 ACATAGTCTTCTCCTTAGGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCAC
* * * *
174746 ACCAATTTTAGTAAAGTCTAAGTTCGTGCCTTAAATAAGACAAACATGGATTCTAGTAATGAAT-
161 ACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAATG-ATC
* * * ** * * * ** *
174810 ATCATTTATTTTGTGATTAGCCACCGTAACCACTTTCTCTTTTTTAGGATAAATGATATTG-ATC
225 TTCATTCATTTTGTGATTAGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-G
* * * * * *
174874 ATTTTCTTTTGCATGAAAATCATTTATTTGCCCTATTTTCCCTAAAATCAAAGTCCATCTCTTAA
289 ATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAA
* * * * * * * * *
174939 ATAA-A-AGGGACATCCATTCTCGTAACAGCCTCTATTCTTTTAAAGAATGGGATGCTAAAATGC
354 ATAAGACA-AG-CATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAGCTAAAACGC
* * * * *** * * * *
175002 ATTCCTTTCTTTAGGAGAGATGTTGTTGATGCTTTGGTGTTGTAAGAAAAACTTTTGTTT
417 ATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
175062 CTACCATTTTTTAAAGAACCAAAGTTTGT-CTCTAAA-ATG-CAAACATGAATACTCATACTAAT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
** * * * * ** * *
175124 CCCCATT-TTTTTTGGATGAGGTAACATATGCATAGTCTTCTCATTAGGATACACGATATTGATG
66 CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
* * * * * *
175188 CTTTGGTATT-ACAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCCTC
131 CTTTGGT-TTCGCAAGAAAGGCTTTTTTCACACCAA--TTTTTGTAAAGTCTAAGTTCGTGTCTC
*
175252 AAATGAGACCAACATGGATTCCAAACATGGATCTAGTAATGATCTTCATTCATTTTGTGATTAGG
193 AAATGAGACAAACATGG---------AT---TCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * * * *
175317 CACCATAAACACATTCCCCTCATTAGGAAAAATGATGTTG-ATGATTTTCTTTTGCGTGGAAATC
246 CACTATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATC
* *
175381 TTTTC--TGCCCTATTTTCCTTCAAACCAAAGTTCATCCCTTAAATAAGACAAAG-ATCGATTCT
310 TTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGAC-AAGCATCGATTCT
* * * * * *
175443 TATAACAGTCTCCATTCTTTT-AATGATTGAGAAGCTAAAACGCGTTTCCTTTATTAGGATGCAT
374 CATAACAGTCTCCATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACAT
* *
175507 GACATTGATGCTTTGGTGTCACAACAAAAGCTTTTCTTT
438 GACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * **
175546 CCACCATTTTTTACAAAATGAAAGTTTAT-CTCTTAAATAAGACAAACACAAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * ** **
175610 TCCCCATTCTTTTTAGGATTAGCCACCATAAACATAGTCTTCACATTTTGATACACAATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * * * * *
175675 GCTTTAGTATTC-CAAAAAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTT
130 GCTTTGGT-TTCGC-AAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * * * *
175739 GAATGAGACAAACATGGATTCT--TATATGATCTCCATTTATTTTGTGATTATGCACCAT-AACA
193 AAATGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* ** *
175801 CATTTTCCTTTTTAGGATAAATGATATTG-ATGA-TTTCTTTTCCATGGAAATCTTTTCTTTGCC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * * * * *
175864 CTATTTTCCTTGAAATCGAAGTTCATCCCTTAAACAAGACAAGCATCAATCCTCATGACAGTCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
** * * ** * * *
175929 CATTCTTTTTGAGATTGGGAACCAGAAATAC-C-TTCATTTCGTTAGGAGACATGATATTGATGC
386 CATTCTTTTCAAGATTGGGAAGC-TAAA-ACGCATTCCCTTCATTAGGATACATGACATTGATGC
*
175992 TTTGGTGTCGCAAGAAAAGCTTTTCTTC
449 TTTGGTGTCGCAAGAAAAGCTTTTCTTT
*** ** * * * *
176020 CCATGGTTTTTGATAGAATCAGGGTTTGT-CTCTTAAGA-AAGACAATCAAGGATACTCATACTA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACATGAATACTCATACTA
* * * * *
176083 ATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTATGATCCATGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * *
176148 TGCTTTGGTTTTGCAAGAAAGGCTTTTGTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * * *
176213 AATGAGAAAAACATGGATTCTAGTAATGATCTTCAGTCATTTTAG-GATTAGGCACCATAAACAT
194 AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT-GTGATTAGGCACTATAAACAC
** * * * *
176277 ATTCTTTTCAATAGGAAAAATTATATTG-AGGATTTTCTTTTGCATGGAAA---TTT-TTTGTCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* ** * * * *
176337 TATTTTTCTTCGAATCAAATTTCATCCCTTAAATAAGACAGGCATCGATTCTCATAATAGTCCCC
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * *
176402 ATT-TTTTTAAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAGGATAGATGACATTGATGCTT
387 ATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
* *
176466 TGGTGTCGCAAAAAAAGGTTTTCTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
176492 CTACCGTGTTTGATAAAATCAAAGTTTGTTTCC--TAAATAAGACAAAC-T---T--GCAT--GA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * * * * *
176547 AT-CCTATTCTTTTCTGGATTAGGCATCATAAACAAAGTCTTCTCATTAAGATACATGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * *
176611 TGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAG-TCTGTGCCTT
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTC-GTGTCTC
* * ** *
176675 AAATGAGACAAATATGGATTCTAGTACT-AT-TATCATTCATTTTGTGATTAGGCACCGTAACCA
193 AAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACA
* ** * * * * * *
176738 CTTTCTCCTTTTTAGGATAAATGATACTG-ATCATTTTCTTTTGCACGAAAATATTTTATTTGCC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* * *** *
176802 CTATTTTCCTTAAAATCAAAGTTCATCTCTTAAATAAAAGGGGCATCCATTCTCATAACAGTCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * **
176867 CATTCTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTAGGAGGCATG-CTATTGATGCT
386 CATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGAC-ATTGATGCT
* * *
176931 TTGGTGTCGTAAGAAAAACTTTTGTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
176958 CTACCATTTTTTATAGAACCAAAGTTTGTCC-CT-AA-ACGGCAAACATGAATACTCATACTAAT
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
** * * ** * ** *
177020 CCCCATTCTTTTTTGGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACACAAAATTGATG
66 CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
* * * * * * * * * * *
177085 CTCTAGTTTTGCAAGAAAGACATTTTTCCCACCATTTTTTTGTAAAGCCTAACTTCGTGCCTTAA
131 CTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCA-ATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * *
177150 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTCTGATTAGGCACCATAAACACAC
195 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACAT
* * * * *
177215 TCCCCTCATTAGGAAAAATGAAATTG-ATGATTTTCTTTTGCGTGAAAATCTTTTC--TGCCCTA
260 TCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTA
* * *
177277 TTTTCCTTCAAA-CTAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTTATAACAGTCTCCA
324 TTTTCCTTAAAATC-AAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * *
177341 TTCTTTTGAAGATTGAGAAGCTAAAATGCATTCCCTTCATTAGGATGCGT-ACATT-ATTGCTTT
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGA-TGCTTT
177404 GGTGTCGCAAGAAAAGCTTTTCTTT
452 GGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * **
177429 CCACCATTTTTTACAGAATCAATGTTTAT-CTCTTAAATAAGATAAACACAAATACTCATACTAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
* * * * * * ** *
177493 TCCCCATTCTTTTTAGGATCAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * ** * * * ** *
177558 GCTTTAGTTTGGCAAAAAGAGGGATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTCCCTTT
130 GCTTTGGTTTCGCAAGAA-AGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTC-TC
* * * *
177623 AAA-GAGACAATCATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTATGCACCAT-AATA
193 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACA
* * * * * *
177685 CATTTTCCTCATTAGGATAAATGATACTG-ATGA--TT-TTTTCCATAGAAATTTTTTTTTTGCC
257 CATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCC
* ** * * * *
177746 CTATTTTCCTTGAAATTGAAGTTCATCCCTTAAACAAGACAAGCATCGATTCTTATTATAGTCTC
321 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* ** * * * * *
177811 CATTCTTTTCGAGATTGGGATCCAAAAACACCTTCACC-TCATTAGGAGACTTGACATTGATGCT
386 CATTCTTTTCAAGATTGGGAAGCTAAAACGCATTC-CCTTCATTAGGATACATGACATTGATGCT
*
177875 TTGGTGTCGCAAG-AAAGCCTTTTCTTC
450 TTGGTGTCGCAAGAAAAG-CTTTTCTTT
** * * * * * * *
177902 CCACGGTTTTTGATACATTCAAGGTTTGT-CTCTTAAGA-ACGACAAACAAGAATACTGC-TACA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACATGAATACT-CATACT
* * ** **
177964 AATCCCTATTCTTTTCAAGATTAGGCACCACAAACATAGTCTTCTTATTAGGATACATGATATTG
63 AATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
** * * * * *
178029 ACACTTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * * * *
178094 AAATGAGACAAACATGGGTTTTAGTAATGATCTACACTCATTTTGTGATTAGGCACCATAAACAC
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
* * *
178159 ATTCTCCTCATTAAGATAAATGATATT-TATGATTTTCTTTTCCATGAAAATCTTTTCTTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* ** * * * *
178223 TATCTTCCTTAACCTCAAAGTTAATCTCC-TAAACAAGACAAGCATCGATTCTCGTAAAAGTCTC
322 TATTTTCCTTAAAATCAAAGTTCATC-CCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * * * * * *
178287 TATTC-CTTCTAGATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGACATGACATTGATGCTT
386 CATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
*
178351 TGGTGTGGCAAGAAAAGCTTTTCTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * ** * *
178377 CCGCCGTTTTTGATAGAATC-AAGGTTTGCCTCTTAAGTAAGACGTACATGAATAATCATAATAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAAATAAGACAAACATGAATACTCATACTAA
** * * * * * * *
178441 TCTTCATTCTTTTTAAGATTAGGCACCATAAAC--AGTCTTCACATTAGGATACACGGTATTGAT
65 TCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGAT
* * * * * **
178504 GCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTTGA
130 GCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAA
* * *
178569 ATGAGACAAACATGGATTCTTA-TAATGATCTTCATTTATTTTGTGATTACGCACCAT-AACACA
195 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACA
* * * **
178632 TTCTCCTCAATAGGATAAATGATATTCATA-ATTTTCTTTTCCATGGAAATCTTTTCTTTGCTTT
259 TTCTCCTCATTAGGATAAATGATATT-GTAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCT
* * * * *
178696 ATTTTCCTTGAAATTAAAGTTCATCCCTTAAATAAGACAAACATCGATTCTCATAATAGACTCCA
323 ATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * ** * * * *
178761 TTCTTTTCGAGATTGGGAACCAAAAAAACATTCACTTTATTAGGAAACATGATATTGATGCTTTG
388 TTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTG
* * *
178826 GTGTCGTAAGAGAAGCTTTTCTTC
453 GTGTCGCAAGAAAAGCTTTTCTTT
* * * * * *
178850 CCACGATTTTTGATAGAATCAAGGTTTGT-CTCTTAAGA-AAGACAAACAAGAATACTCCTACAA
1 CCACCATTTTTGATAGAATCAAAGTTTTTCCT-TTAA-ATAAGACAAACATGAATACTCATACTA
* * * * * *
178913 ATCCCTATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATCCAAGATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * *
178978 TGCTTTGGTTTTGCAAGAAAGG-TTTTTATC-CACCAATTTTTGTAAAGTATAAGTTCATGTCTC
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTT-TCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTC
* * *
179041 AAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTCGTTTTGTGATTAGGCACCATAAACAC
193 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACAC
** * * * *
179106 ATTCTTTTCATTAGGAAAAATGATATT-AATGATTTTCTTTTGCGTGGAAATCTTTTC--TGCTC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
* ** * *
179168 TGTTTTCCTTCGAATCAAAGTTTATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCT
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * * *
179233 ATTCTTCT-AAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAAGATACATGACATTGATGCTT
387 ATTCTTTTCAA-GATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
179297 TGGTGTCGCAAGAAAAGCTTTTCTTT
451 TGGTGTCGCAAGAAAAGCTTTTCTTT
* ** * * * * * *
179323 CTACTGTTTTTGATAAAATCAATGTTTATTTCC--TAAAAAAGGCAAAC-T---T--GCAT--GA
1 CCACCATTTTTGATAGAATCAAAG-TT-TTTCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * * ** **
179378 AT-CCCATTTTTTTC-GAATTAGGCACCATAAACAAAGTCTTCTTTTTAGGATACACAATATTGA
64 ATCCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGA
* * * * * *
179441 TGCTTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTAGTAAAATCTAAGTTCGTGCCTTA
129 TGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCA
* * * * * *
179506 AATGAGGCAAACATGGATTGTAGTAATGAT-TATCTTTCATTTTGTGACTAGGCACCATAACCAC
194 AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACTATAAACAC
* ** * * *
179570 TTTCTCCTTTTTAAGATAAATGATATTG-ATGATTTTCTTTTGCATGAAAATCTTTTATTTGCCC
258 ATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAAATCTTTTCTTTGCCC
*
179634 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAA-A-AAGGGCATCCATTCTCATAACAGTCT
322 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAA--GCATCGATTCTCATAACAGTCT
* * * * * * * * * ***
179697 CCAATCTTTTAAAGAATGGGATGCTAAAATGCATTCCTTTCTTTAGGAGACACGTTGTTGATGCT
385 CCATTCTTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCT
* * *
179762 TTGGTGTCGTAAGAAAAACTTTTGTTT
450 TTGGTGTCGCAAGAAAAGCTTTTCTTT
* * * * * * *
179789 CTACCATTTTTTATAAAACCAAAGTTTGTCTCC--AAAATAGGACAAATATGAATACTCATAC-A
1 CCACCATTTTTGATAGAATCAAAGTTT-T-TCCTTTAAATAAGACAAACATGAATACTCATACTA
* * * * * ** **
179851 ATCTCTATTCTTTTTC-GGATTATGTACCATATGCATAGTCTTCTTATTAGGATACATGATATTG
64 ATCCCCATTC-TTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTG
* ** * * ** * *
179915 ATGCTTTGGTTTTGCAAGAAACACATTTTTCCCACCAATTTTTTTGTAAACCCTAACTTCGTGCC
128 ATGCTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAA--TTTTTGTAAAGTCTAAGTTCGTGTC
* *
179980 TCAAACGAGACAAACACGGATTCTAAACATGGATTCTAGTAATGAACTTCATTCATTTTGTGATT
191 TCAAA--TG------A--GA--C-AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATT
* * * * * *
180045 AGGCACCATAAACACATTCCCCTCATTAGGAAAAATTATATTG-ATGACTTTCTTTTGCGTGGAA
243 AGGCACTATAAACACATTCTCCTCATTAGGATAAATGATATTGTA-GATTTTCTTTTGCATGGAA
180109 ATCTTTTCTTT
307 ATCTTTTCTTT
180120 TGAAGATTGA
Statistics
Matches: 30411, Mismatches: 6238, Indels: 4267
0.74 0.15 0.10
Matches are distributed among these distances:
452 2 0.00
453 4 0.00
454 60 0.00
455 30 0.00
456 65 0.00
459 1 0.00
461 3 0.00
462 70 0.00
463 228 0.01
464 806 0.03
465 914 0.03
466 697 0.02
467 1154 0.04
468 281 0.01
469 24 0.00
470 39 0.00
471 291 0.01
472 2810 0.09
473 4854 0.16
474 4271 0.14
475 4105 0.13
476 3228 0.11
477 807 0.03
478 29 0.00
479 29 0.00
480 18 0.00
481 26 0.00
482 31 0.00
483 27 0.00
484 240 0.01
485 26 0.00
486 255 0.01
487 107 0.00
488 340 0.01
489 324 0.01
490 388 0.01
491 257 0.01
492 263 0.01
493 292 0.01
494 43 0.00
495 49 0.00
496 40 0.00
497 43 0.00
498 42 0.00
499 32 0.00
500 58 0.00
501 54 0.00
502 151 0.00
503 135 0.00
504 97 0.00
505 47 0.00
506 34 0.00
507 28 0.00
508 136 0.00
509 62 0.00
510 32 0.00
511 36 0.00
512 11 0.00
513 22 0.00
514 33 0.00
515 32 0.00
516 22 0.00
517 44 0.00
518 37 0.00
519 45 0.00
520 22 0.00
521 27 0.00
522 24 0.00
523 20 0.00
524 38 0.00
525 40 0.00
526 25 0.00
527 32 0.00
528 25 0.00
529 86 0.00
530 81 0.00
531 22 0.00
532 27 0.00
533 22 0.00
534 18 0.00
535 28 0.00
536 44 0.00
537 48 0.00
538 57 0.00
539 37 0.00
540 59 0.00
541 66 0.00
542 58 0.00
543 43 0.00
544 24 0.00
545 41 0.00
546 36 0.00
547 42 0.00
548 24 0.00
549 19 0.00
550 17 0.00
551 16 0.00
552 21 0.00
553 22 0.00
554 22 0.00
555 50 0.00
556 17 0.00
557 27 0.00
558 30 0.00
559 19 0.00
560 88 0.00
561 13 0.00
562 15 0.00
563 23 0.00
564 16 0.00
565 9 0.00
566 5 0.00
567 11 0.00
568 4 0.00
570 4 0.00
571 1 0.00
572 2 0.00
578 4 0.00
580 2 0.00
585 7 0.00
587 69 0.00
588 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (476 bp):
CCACCATTTTTGATAGAATCAAAGTTTTTCCTTTAAATAAGACAAACATGAATACTCATACTAAT
CCCCATTCTTTTCAGGATTAGGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATG
CTTTGGTTTCGCAAGAAAGGCTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAA
TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACACATT
CTCCTCATTAGGATAAATGATATTGTAGATTTTCTTTTGCATGGAAATCTTTTCTTTGCCCTATT
TTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
TTTTCAAGATTGGGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
TCGCAAGAAAAGCTTTTCTTT
Found at i:143003 original size:158 final size:155
Alignment explanation
Indices: 140940--143516 Score: 623
Period size: 158 Copynumber: 16.3 Consensus size: 155
140930 CTCAAGTGTC
* * * **
140940 GGCACCATAAACACAGTCTTCTCATTAGGATATAGGATATTGATGTTTTGGTTTCG-AAAGAAAG
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAAA-AAA-
* * * *
141004 GCATTTTTCC-CCTTAATTTTTGTAAAGTTTAAGTTCGGGC-CTTAAATGAA-ACAAACAT-ATA
64 GCTTTTTTCCACC--AATTTTTGTAAAGTCTAAGTTC-GTCTCCTAAAT-AAGACAAACATGA-A
* *
141065 TTCTAGTAATGATCT-TCCTTCATTTTGGGATTA
124 TTCTAGTAATAATCTCT-ATTCATTTT-GGATTA
* * * * * * ** ** ** *
141098 GGCACTATAAACACATCCTCCTCTTTAGGATAAAAGATATTGATG-ATTTTCTTTTACATGGACA
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCA-TTGGTTTCGCA-AAAAA
* *** * * * ** * * *
141162 TCTTTTCTTTGTCCTATTTTCGAAAAAACAAAGTTCATC-CCTTAAATAAGACAAGCATCG-ATT
64 GCTTTT-TTCCACCAATTTTTGTAAAGTCTAAGTTCGTCTCC-TAAATAAGACAAACAT-GAATT
* * * * * *
141225 CTTGTAACAGTCTCCATTCTTTTTAGGATTG
126 CTAGTAATAATCTCTATTCATTTT-GGATTA
* * * * * *
141256 GGAACTATAAACACATT-TCCTTCATTAGGATACATGACATTGATGCTTTGGTGTCGCAAGAAAA
1 GGCACCATAAACACATTCTTC-TCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AAAA
* * *
141320 ACTTTTCTTTCCACC-ATTTTTGCTAGAA-TCAAAGTT--TTTCCTTTAAATAAGACAAACATGA
64 GC-TTT-TTTCCACCAATTTTTG-TA-AAGTCTAAGTTCGTCTCC--TAAATAAGACAAACATGA
* * * * *
141381 ATACTCA-TACTAATCCCCATTC-TTTTCAGGATTT
123 ATTCT-AGTAATAATCTCTATTCATTTT--GGATTA
* * * * * * * ** *
141415 GGCACCATAAACATAGTCTACCCCTTAGGATACATGATATCGATGCTTTAATTTCGCAAGAAAGG
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AAAAG
* * * * * *
141480 CTTTTTTCACACAAATTTTTGTGAAGTCTAAGTTTGTGT-CTCAAATGAGACAAACATGGATTCT
65 CTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTCTCCT-AAATAAGACAAACATGAATTCT
* * *
141544 AGTAATGATCTTCGA-TCATTTTGTAATTA
128 AGTAATAATC-TCTATTCATTTTG-GATTA
* * * * * * * ** **
141573 AGCACTATAAACACATTGTGCTCATTAGGATAAATGATATAG-TAG-TTTTCTATT-GCATGGAA
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGAT-GCATTGGT-TTCGCA-AAAA
* * * * * *
141635 ATCTTTTCTTTTCC-CC-ATTTTAGATGAAA-TCAAAGTTCATC-CCTTAAATAAGACGAGCATC
63 AGC--TT-TTTTCCACCAATTTTTG-T-AAAGTCTAAGTTCGTCTCC-TAAATAAGACAAACAT-
* * * * * * *
141696 G-ATTCTCA-TAACAGTTTCCATTC-TTTTCAAGAGTG
121 GAATTCT-AGTAATAATCTCTATTCATTTT--GGATTA
* * * * * * **
141731 GGAAGC-TAAA-ATGCATTTCTT-TAATTAGGATACAAGACATTGATGCTTTGGCGTCGCAAGAA
1 GGCACCATAAACA--CA-TTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AA
* * * * *
141793 AAGCTTTTTTTTCCACCATTTTTTATAGAA-TCAAAGTTTGTCTCTTAAATAAGACAAACATGAA
62 AAGC--TTTTTTCCACCAATTTTTGTA-AAGTCTAAGTTCGTCTCCTAAATAAGACAAACATGAA
* * * * *
141857 TACTTA-TACTAATCCCCAATC-TTTTCAGGATTA
124 TTC-TAGTAATAATCTCTATTCATTTT--GGATTA
* * * * * *
141890 GGCACCGTAAACATAGTT-TTCTCGTTAGGATACATGATATTGATGCTTTGGTTTCCCAAGAAAG
1 GGCACCATAAACACA-TTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AAAA
* * * * *
141954 GCTTTTTTCACACCAATTTTTGTAAAGTCTATGTTCGTGGT-CTAAATGAGACAAACAAGGATTC
64 GCTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGT-CTCCTAAATAAGACAAACATGAATTC
*
142018 TAGTAATGATCT-TCATTCATTTTGTGATTA
127 TAGTAATAATCTCT-ATTCATTTTG-GATTA
* * * * * * * * ** * * **
142048 GGAACCATGAATACATTCTCCTCATTGGGATAAACGATAGTGATG-ATTTTCTTTTGTATGGAAA
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCA-TTGGTTTCGCA-AAAAA
* * * * * * * *
142112 TCTTTTACTTGCC-CTAGTTTCCT-TAAAATC-AATGTTC-ACCCCTTAAATAAGACAAACATCA
64 GCTTTT--TT-CCACCAATTT-TTGTAAAGTCTAA-GTTCGTCTCC-TAAATAAGACAAACATGA
* * * *
142173 ATTCTCA-AAATAATCTCTATTCTTTTTAAAGATTG
123 ATTCT-AGTAATAATCTCTATTCATTTT--GGATTA
* * * * * * *
142208 GGAAGC-TAAAACGCATTCCCTT-T-TTTAGGATACATGATATTCATGCTTTGGTGTCGCAAGAA
1 GGCACCAT-AAACACATT--CTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AA
* * *
142270 AAGCTTTTCTTTCCA-CAATTTTTG-ATAAGTTCAAAGTTTGTCTCCTAAATAAGACAAGCATGA
62 AAGC-TTT-TTTCCACCAATTTTTGTA-AAG-TCTAAGTTCGTCTCCTAAATAAGACAAACATGA
* * * *
142333 ATACTCA-TACTAATAC-CCATT-ATTTTCTAGATTA
123 ATTCT-AGTAATAAT-CTCTATTCA-TTT-TGGATTA
* * * * * * * * * ** *
142367 GGCACCGTAAACAAAGTCTTCCCCTTAGTATACAAT-ATGTTAATGCTTTAATTTCGCAAGAAAG
1 GGCACCATAAACACATTCTTCTCATTAGGATAC-ATGATATTGATGCATTGGTTTCGCAA-AAAA
* * * * * * *
142431 GCATTTTTCACACAAATTTTTGTGAGGTCTAAGTTTGTGT-CTCAAATGAGACAAACATTG-ATT
64 GCTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTCTCCT-AAATAAGACAAACA-TGAATT
* * *
142494 CTAGTAATGATCT-TCAAT-AGTTTTGTAATTA
126 CTAGTAATAATCTCT-ATTCA-TTTTG-GATTA
* * * * ** ***
142525 GGTACTATAAACACATT-TTGCTCAATAGGATAAATGATATT-AGTG-ATTTTCTATTACG-TGG
1 GGCACCATAAACACATTCTT-CTCATTAGGATACATGATATTGA-TGCA-TTGGT-TT-CGCAAA
* * * ** * ** *
142586 AAATCTTTTCTTTTCC-CC-ATTTTCCT-TAAAATCAAAGTTTATCTCTTAAATAAGATGAGCAT
61 AAAGC--TT-TTTTCCACCAATTTT--TGTAAAGTCTAAGTTCGTCTCCTAAATAAGACAAACAT
* ** * *
142648 CG-ATTCTCA-TAACAGCCTCCATTC-TTTTCAGGATTG
121 -GAATTCT-AGTAATAATCTCTATTCATTTT--GGATTA
* * * * * *
142684 GGAAGC-TAAA-ATGCATTC-CCTTCATTAGGATACATGATATTGATGCCTTGGTGTCACAAGAA
1 GGCACCATAAACA--CATTCTTC-TCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AA
* * * *
142746 AAGCTTTTCCTTCCACCATTTTTTATAGAA-T-TAGAGTTTGTCTCTTAAATAAGACAAACATGA
62 AAGCTTTT--TTCCACCAATTTTTGTA-AAGTCTA-AGTTCGTCTCCTAAATAAGACAAACATGA
* * * * *
142809 ATACTCA-TACTAATCCCCATTCTTTTTAGGATTA
123 ATTCT-AGTAATAATCTCTATTCATTTT-GGATTA
* * * *
142843 GGCACCGTAAACATAGTCTTCTCCTTAGGATACATGATATTGATGCATTGGTTTCGCAAAAAAGG
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAAAAAA-G
* * *
142908 CTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTCTCCTATATGAGACAAACATGGATTCTA
65 CTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTCTCCTAAATAAGACAAACATGAATTCTA
* *
142973 GTAATGATCTTTATTCATTTTGTGATTA
129 GTAATAATCTCTATTCATTTTG-GATTA
* * * * * ***
143001 GGCACTATAAACACATTCTCCTTATTAGGAAAAATGATATTGATG-ATT--TTCTTTTAAATGGA
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCATTGGTT-TCGCAAA---A
* * * ** * * * * * * *
143063 AATCTTTTCTGCC-CCTATTTTCCATAAAATC-AATATTCATC-CTTTACATAAGACAAGCATCA
62 AAGCTTTT-TTCCACCAATTTT-TGTAAAGTCTAA-GTTCGTCTC-CTAAATAAGACAAACATGA
* * * **
143125 ATTCTCGTAACAGTCTCTATTC-TTTCAAAGATTA
123 ATTCTAGTAATAATCTCTATTCATTT--TGGATTA
* * * * *
143159 GGAAGC-TAAAGCACATTCCCTTCT--TTAGGATAC-TGAAATTGATGCTTTGGTGTCGCAAGAA
1 GGCACCATAAA-CACATT--CTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AA
* * * ** *
143220 AAGCTTTTCTTTCCACC-CTTTTTG-ATAAGTTCAAAGTTTGTCTCCTAAATAAGACAAGTACGA
62 AAGC-TTT-TTTCCACCAATTTTTGTA-AAG-TCTAAGTTCGTCTCCTAAATAAGACAAACATGA
** * * *
143283 AAAC-A-TACTAATCCCTATTCCTTTTAGGATTA
123 ATTCTAGTAATAATCTCTATTCATTTT-GGATTA
* * * * *
143315 GGCACCATAAACATAGTCTTCTCCTTAGGATACATGATATTGATTCATTGGTTTCGCAACAAAGG
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAA-AAAAG
* * *
143380 CTTTTTTCACACCAATTTTTGTAAAGTCTAAGTTCGTGTCCTAAATGAGACAAACATGGATTCTA
65 CTTTTTTC-CACCAATTTTTGTAAAGTCTAAGTTCGTCTCCTAAATAAGACAAACATGAATTCTA
* * *
143445 GTAATGATCT-TCATTCATTTTGTAATTT
129 GTAATAATCTCT-ATTCATTTTG-GATTA
* * * *
143473 GGCACTATAAACACATTCTTTTCATTAGGAAAAATGATATTGAT
1 GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGAT
143517 AATTTTCTTT
Statistics
Matches: 1732, Mismatches: 492, Indels: 390
0.66 0.19 0.15
Matches are distributed among these distances:
154 5 0.00
155 6 0.00
156 75 0.04
157 168 0.10
158 760 0.44
159 551 0.32
160 145 0.08
161 19 0.01
162 3 0.00
ACGTcount: A:0.31, C:0.18, G:0.14, T:0.36
Consensus pattern (155 bp):
GGCACCATAAACACATTCTTCTCATTAGGATACATGATATTGATGCATTGGTTTCGCAAAAAAGC
TTTTTTCCACCAATTTTTGTAAAGTCTAAGTTCGTCTCCTAAATAAGACAAACATGAATTCTAGT
AATAATCTCTATTCATTTTGGATTA
Found at i:146670 original size:473 final size:471
Alignment explanation
Indices: 145105--147721 Score: 2555
Period size: 465 Copynumber: 5.6 Consensus size: 471
145095 AAAGTTAATA
* * * * * ** **
145105 CCTTAGAAGACATGATATCGAAGCTTTGGTGTCGCAA-AAGAAGCTTTT-TTTCCCATGATAATT
1 CCTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAA-AAGCTTTTCTTTCTCACCATTTTT
* * * *
145168 GATAGAACCAAGGTTTGTCTCTTAAGAAAGACAAACAAGAATACTCATACTAATCCCTATTCTTT
65 GATAAAATCAAAGTTTATCTCTTAA-AAAGACAAAC-AGAATACTCATACTAAT-CCTATTCTTT
* * * * *
145233 TTAGGATTAGGCACCATAAAAATAGTCTTCTTATTAGTAT-CTATGATATTGATGCTTTGGTTTT
127 TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAC-ACGATATTGATGCTTTGGTTTT
* * * *
145297 GCAAGAAAGGCTTTTATCCCAGCAATTTTTTTAAAGTCTAAGTTCGTGTCTTAAATGAGACAAGC
191 GCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAAC
* * * * *
145362 GTGGATT-ATAGTAATGATTTCATTCATTTTGTGATTATGCACCAAAAACACATTCTTTTCATTA
255 ATGGATTCTTAGTAATGATTTCATTCATTTTGTGATTAGGCACC-ATAACACATTCTCTTCATTA
*
145426 GGAA-AAATAATATTGATGATTTTCTTTTCCATGGAAATCTTTTC--TGCCCTATTTTCCTTCG-
319 -GAATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-GA
** * * **
145487 AATCAAAGTTCATATCTTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTCCATTAAAG
382 AATCAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAG
* * *
145552 ATTAGGAAGCC-AAAACGCAATCCTTT
447 ATTGGGAA-CCAAAAACAC-ATCCCTT
* * * *
145578 CCTTAGGATACATGGCATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTT-TTACCATTTTTG
1 CCTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTCACCATTTTTG
* * *
145642 ATAAAATCAAAGTTTATTTCCTAAATAAGACAAAC----T--TGC--ACAAATCCTATTCTTTTC
66 ATAAAATCAAAGTTTATCTCTTAAA-AAGACAAACAGAATACT-CATACTAATCCTATTCTTTTC
* * * * * * *
145699 CGGATTAGGCATCGTAAACAAAGTCTTCTTATTAGGATACATGATATTGACGCTTTGGTTTTGCA
129 AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTGCA
* * *
145764 AGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAGTTCATGCCTTAAAAGAGACAAACATG
194 AGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATG
* * * *
145829 AATTC-TAGTAATGATTATCATTCATTTTGTGATTAGGCGCCATAAACACATTCTCCTCATTAGG
258 GATTCTTAGTAATGATT-TCATTCATTTTGTGATTAGGCACCAT-AACACATTCTCTTCATTAGA
* *
145893 ATAAATGATATTGATGATTTT-TTTTCCATGGAATTCTTTTCTTTGCCCTATTTTCCTTAAAATC
321 ATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATC
* * * * **
145957 AAAGTTAATCCCTTAAATAA-ATAAGCATCGATTTTCGTAAAAGTCTCCATTCTTTCCAAGATTG
386 AAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTG
* * * * *
146021 GGAACTAAAATCCCCTTCACTT
451 GGAACCAAAA-ACACATCCCTT
* * *
146043 CCTTGGGAGACATGACATTGATGCTTTGGTGTTGCAACAAAAGCTTTTCTTTC-CACCATTTTTG
1 CCTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTCACCATTTTTG
* * * * * * * *
146107 ATAGAATCAAGGTTTGTCTCTTAAGTAAGACATACATGAATAATGATAATAATCCTCATTCTTTT
66 ATAAAATCAAAGTTTATCTCTTAA-AAAGACAAACA-GAATACTCATACTAATCCT-ATTC-TTT
* * * * * * * *
146172 TAAGG-TTAGGCAGCATAACCATAGTCTTCACATTAGGATACACCATACTGATGCTTTGGTCTCG
127 TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTG
* * *
146236 CAAGAAAGGCATTTTTCCCACCAATTTTTGAAAAG-CTAA-TTTGTGCCTTATATGAGACAAACA
192 CAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACA
* * * *
146299 TGGATTCTTA-TAATTATCTTCATTCATTTTGTGATTACGCACCATAACACATTCCCCTCATTAG
256 TGGATTCTTAGTAATGAT-TTCATTCATTTTGTGATTAGGCACCATAACACATTCTCTTCATTAG
** **
146363 AATAAATGATATTGACAATTTTCTTTTCCACAGAAATCTTTTCTTTGCCCTATTTTCCTTGAAAT
320 AATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAAT
* ** *
146428 CAAAATTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTTGAGATG
385 CAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATT
*
146493 GGGAACCAAAAACACCTCCACTT
450 GGGAACCAAAAACACATCC-CTT
* * * * * **
146516 CATTAGGAAACATGATATTGATGCTTCGGTGTCGCAAGAGAAGCTTTT-TTTCTCACGGTTTTTG
1 CCTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTCACCATTTTTG
* *
146580 ATAAAATCAAGGTCTATCTCTTAAGAAAGACAAACAAGAATACTCATACTAATCCCTATTCTTTT
66 ATAAAATCAAAGTTTATCTCTTAA-AAAGACAAAC-AGAATACTCATACTAAT-CCTATTCTTTT
* *
146645 CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATCCATGATATTGATGCTTTGGTTTTGC
128 CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTGC
* * * * * *
146710 AGGAAAGGCTTTTATCCCACAAATTTTTGTAAAGTCCAAGTTCGTGTCTCAAATGAGACAAACCT
193 AAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACAT
* * * *
146775 GGATT-TTAATAATGATCTTCATTCATTTTGTGATTAGGCACCATAAATACATTCTTTTCATTAT
257 GGATTCTTAGTAATGAT-TTCATTCATTTTGTGATTAGGCACCAT-AACACATTCTCTTCATTAG
* * * *
146839 AAAAAATGATATTGATGATTTTCTTTTGCATGGAAATC-CTT-TTTGCCTTATTTTCCTTCG-AA
320 AATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-GAAA
* * * *
146901 TCAAAGTTCATCCCTTAAAGAAGATAAGCATCGATTCT-AGTAATAGTCTCAATTCTTTTAAGGA
384 TCAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCA-TAACAGTCTCCATTCTTTTAAAGA
** * *
146965 TTAAGAAGCCAAAATGCA-ATCTCTT
448 TTGGGAA-CCAAAA-ACACATCCCTT
* * * * *
146990 CTTTAGGATACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTGTTTCT-ACCGTTTTTG
1 CCTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTCACCATTTTTG
* * *
147054 ATAAAATCAAAGTTTATTTCCTAAATAAGACAAAC----T--TGCAT--GAAT-CTGATTCTTTT
66 ATAAAATCAAAGTTTATCTCTTAAA-AAGACAAACAGAATACT-CATACTAATCCT-ATTCTTTT
* ** * * * * **
147110 CTGGATTAGGCACTGTACAGAAAGTCTTCTCTTTAGGATACACGATATTGATGCTTTGGTTTCAC
128 CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTGC
* * * * * *
147175 AAGAAAAGCTTTCTTCCCACCAATTTTAGTAAAGCCTAATTTCGGGCCATAAATGAGACAAACAT
193 AAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACAT
* * * * **
147240 GGATTC-TAGTAATGATTATCATTCGTTTTGTGATTAGGCACCGTAACCACTTTCCCTTTTTTAG
257 GGATTCTTAGTAATGATT-TCATTCATTTTGTGATTAGGCACCATAA-CACATTCTCTTCATTAG
* * * * *
147304 GATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGCCCTATTTTTCTT-AAAG
320 AATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAA-
* * *** * * * *
147368 TCAAAGTTCATCCCCTAAATAAAAGGGGCATCCATTTTCGTAACAGTCTCCATTCTTTTAAAGAA
384 TCAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGAT
* *
147433 TGGGATA-CTAAAACGCATTCCCTT
449 TGGGA-ACCAAAAACACA-TCCCTT
* * * * * *
147457 CTTTAGGAGACATG-CTGTTAATGCTTTGGTGTCGTAAGAAAAACTTTTGTTTCT-ACCATTTTT
1 CCTTAGGAGACATGAC-ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTCACCATTTTT
* * * * *
147520 TATAGAACCAAAGTTTGTCTC-T-AAAAGACAAACTTGAATACTCATACTAATCCCTATTCTTTT
65 GATAAAATCAAAGTTTATCTCTTAAAAAGACAAAC-AGAATACTCATACTAAT-CCTATTCTTTT
** * ** ** * * *
147583 TGGGATTAGGTACTGTATGCATAGTCTTTTCTTTAGGATACACGATATTGATGTTTTGGTTTTGC
128 CAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTGC
* **
147648 AAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAG-CATAACTTCGTGCCACAAATGAGACAAA
193 AAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAAGTC-TAAGTTCGTGCCTTAAATGAGACAAA
147712 CATGGATTCT
254 CATGGATTCT
147722 AAACGTGGAT
Statistics
Matches: 1774, Mismatches: 290, Indels: 157
0.80 0.13 0.07
Matches are distributed among these distances:
464 173 0.10
465 392 0.22
466 54 0.03
467 146 0.08
468 5 0.00
469 2 0.00
470 4 0.00
471 38 0.02
472 137 0.08
473 389 0.22
474 261 0.15
475 125 0.07
476 48 0.03
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.36
Consensus pattern (471 bp):
CCTTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTCACCATTTTTG
ATAAAATCAAAGTTTATCTCTTAAAAAGACAAACAGAATACTCATACTAATCCTATTCTTTTCAG
GATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTTTTGCAAG
AAAGGCTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGAT
TCTTAGTAATGATTTCATTCATTTTGTGATTAGGCACCATAACACATTCTCTTCATTAGAATAAA
TGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGT
TCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTTAAAGATTGGGAAC
CAAAAACACATCCCTT
Found at i:147675 original size:938 final size:933
Alignment explanation
Indices: 145226--147723 Score: 2683
Period size: 938 Copynumber: 2.7 Consensus size: 933
145216 ACTAATCCCT
* * ** * *
145226 ATTCTTTTTAGGATTAGGCACCATAA-AAATAGTCTTCTTATTAGTAT-CTATGATATTGATGCT
1 ATTCTTTTTAGG-TTAGGCAGCATAACCAA-AGTCTTCACATTAGGATAC-ACGATATTGATGCT
* * * * *
145289 TTGGTTTTGCAAGAAAGGCTTTTATCCCAGCAATTTTTTTAAAGTCTAAGTTCGTGTCTTAAATG
63 TTGGTTTCGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG-CTAATTTCGTGCCTTAAATG
* * * * *
145354 AGACAAGCGTGGATTATAGTAATGATTTCATTCATTTTGTGATTATGCACCAAAAACACATT--C
126 AGACAAACATGGATTCTAGTAATGATTTCATTCATTTTGTGATTACGCACC-ATAACACATTCCC
* * * *
145417 TTTTCATTAGGAAAAATAATATTGATGATTTTCTTTTCCATGGAAATC-TTTTCTGCCCTATTTT
190 TTTT--TTAGGATAAATGATATTGATGATTTTCTTTTCCATGAAAATCTTTTTTTGCCCTATTTT
* ** **
145481 CCTTCGAATCAAAGTTCATATCTTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTCCA
253 CCTTCAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTCTT
* * * * *
145546 TTAAAGATTAGGAAGCCAAAACGCAATCCTTTCCTTAGGATACATGGC-ATTGATGCTTTGGTGT
318 TTAAAGAATGGGAA-CCAAAACGCAATCCCTTCATTAGGAAACAT-GCTATTGATGCTTTGGTGT
* * *
145610 TGCAAGAAAAGCTTTTCTTTTTACCATTTTTGATAAAATCAAAGTTTATTTCCTAAATAAGACAA
381 CGCAAGAAAAGCTTTT-TTTCTACCATTTTTGATAAAATCAAAGTTTATCT-CTAAA-AAGACAA
* * *
145675 ACTTG------C--ACAAAT-CCTATTCTTTTCCGGATTAGGCA-TCGTAAACAAAGTCTTCTT-
443 ACTTGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACT-GTAAACATAGTCTT-TTC
* *
145729 ATTAGGATACATGATATTGACGCTTTGGTTTTGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTA
506 ATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTA
* * * * *
145794 AAGTCTAAGTTCATGCCTTAAAAGAGACAAACATGAATTCTAGTAATGATTATCATTCATTTTGT
570 AAGTCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAATAATGATTATCATTCATTTTGT
* * *
145859 GATTAGGCGCCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTTTTTCCATGG
635 GATTAGGCACCATAAACACATTCTCCTCATTAGAAAAAATGATATTGATGATTTTTTTTCCATGG
* * *
145924 AATTCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAATAAATAAGCATCGAT
700 AAATCTCTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAAGAAATAAGCATCGAT
* * * ** * ** *
145989 TTTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACTAAAATCCCCTTCACTTCCTTGGGAGAC
765 TCTAGTAAAAGTCTCAATTCTTTCCAAGATTAAGAACCAAAATCCCAATCACTTCCTTAGGAGAC
* *
146054 ATGACATTGATGCTTTGGTGTTGCAACAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGG
830 ATGACATTGATGCTTTGGTGTTGCAACAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAG
* * * *
146119 TTTGTCTCTTAAGTAAGACATACATGAATAATGATAATAATCCTC
895 TTTATCTCCTAAATAAGACAAACATG-A-AATG---A-AATCCTC
* * *
146164 ATTCTTTTTAAGGTTAGGCAGCATAACCATAGTCTTCACATTAGGATACACCATACTGATGCTTT
1 ATTCTTTTT-AGGTTAGGCAGCATAACCAAAGTCTTCACATTAGGATACACGATATTGATGCTTT
* * *
146229 GGTCTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGAAAAGCTAATTT-GTGCCTTATATGAGA
65 GGTTTCGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCTAATTTCGTGCCTTAAATGAGA
* *
146293 CAAACATGGATTCTTA-TAATTATCTTCATTCATTTTGTGATTACGCACCATAACACATTCCCCT
129 CAAACATGGATTC-TAGTAATGAT-TTCATTCATTTTGTGATTACGCACCATAACACATTCCCTT
** * ** *
146357 CATTAGAATAAATGATATTGACAATTTTCTTTTCCA-CAGAAATCTTTTCTTTGCCCTATTTTCC
192 TTTTAGGATAAATGATATTGATGATTTTCTTTTCCATGA-AAATCTTTT-TTTGCCCTATTTTCC
* * * *
146421 TTGAAATCAAAATTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCCATTCTTTT
255 TTCAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTCTTTT
** * * * *
146486 TGAG-ATGGGGAACCAAAA-ACACCTCCACTTCATTAGGAAACATGATATTGATGCTTCGGTGTC
320 AAAGAAT-GGGAACCAAAACGCA-ATCC-CTTCATTAGGAAACATGCTATTGATGCTTTGGTGTC
* ** * *
146549 GCAAGAGAAGCTTTTTTTCTCACGGTTTTTGATAAAATCAAGGTCTATCTCTTAAGAAAGACAAA
382 GCAAGAAAAGCTTTTTTTCT-ACCATTTTTGATAAAATCAAAGTTTATCTC-TAA-AAAGACAAA
** ** *
146614 CAAGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
444 CTTGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACTGTAAACATAGTCTTTTCATT
* * *
146679 AGGATCCATGATATTGATGCTTTGGTTTTGCAGGAAAGGCTTTTATCCCACAAATTTTTGTAAAG
509 AGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG
* * * *
146744 TCCAAGTTCGTGTCTCAAATGAGACAAACCTGGATTTTAATAATGATCT-TCATTCATTTTGTGA
573 TCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAATAATGAT-TATCATTCATTTTGTGA
* ** * *
146808 TTAGGCACCATAAATACATTCTTTTCATTATAAAAAATGATATTGATGATTTTCTTTTGCATGGA
637 TTAGGCACCATAAACACATTCTCCTCATTAGAAAAAATGATATTGATGATTTT-TTTTCCATGGA
* ** *
146873 AATC-CTT-TTTGCCTTATTTTCCTTCGAATCAAAGTTCATCCCTTAAAGAAGATAAGCATCGAT
701 AATCTCTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAAGAA-ATAAGCATCGAT
* * * * * *
146936 TCTAGTAATAGTCTCAATTCTTT-TAAGGATTAAGAAGCCAAAAT-GCAATCTCTTCTTTAGGAT
765 TCTAGTAAAAGTCTCAATTCTTTCCAA-GATTAAGAA-CCAAAATCCCAATCACTTCCTTAGGAG
* * * *
146999 ACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTGTTTCTACCGTTTTTGATAAAATCAA
828 ACATGACATTGATGCTTTGGTGTTGCAACAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAA
* * * *
147064 AGTTTATTTCCTAAATAAGACAAACTTG-CATG-AAT-CTG
893 AGTTTATCTCCTAAATAAGACAAACATGAAATGAAATCCTC
* * * *
147102 ATTCTTTTCT-GGATTAGGCA-C-TGTACAGAAAGTCTTCTCTTTAGGATACACGATATTGATGC
1 ATTCTTTT-TAGG-TTAGGCAGCAT-AAC-CAAAGTCTTCACATTAGGATACACGATATTGATGC
* * * * *
147164 TTTGGTTTCACAAGAAAAGCTTTCTTCCCACCAATTTTAGTAAAGCCTAATTTCGGGCCATAAAT
62 TTTGGTTTCGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAG-CTAATTTCGTGCCTTAAAT
* * * *
147229 GAGACAAACATGGATTCTAGTAATGATTATCATTCGTTTTGTGATTAGGCACCGTAACCACTTTC
125 GAGACAAACATGGATTCTAGTAATGATT-TCATTCATTTTGTGATTACGCACCATAA-CACATTC
*
147294 CCTTTTTTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGCCCTATTT
188 CCTTTTTTAGGATAAATGATATTGATGATTTTCTTTTCCATGAAAATCTTTT-TTTGCCCTATTT
* * * *** * * *
147359 TTCTT-AAAGTCAAAGTTCATCCCCTAAATAAAAGGGGCATCCATTTTCGTAACAGTCTCCATTC
252 TCCTTCAAA-TCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTC
* * * * * *
147423 TTTTAAAGAATGGGATACTAAAACGCATTCCCTTCTTTAGGAGACATGCTGTTAATGCTTTGGTG
316 TTTTAAAGAATGGGA-ACCAAAACGCAATCCCTTCATTAGGAAACATGCTATTGATGCTTTGGTG
* * * * * *
147488 TCGTAAGAAAAACTTTTGTTTCTACCATTTTTTATAGAACCAAAGTTTGTCTCT-AAAAGACAAA
380 TCGCAAGAAAAGCTTTT-TTTCTACCATTTTTGATAAAATCAAAGTTTATCTCTAAAAAGACAAA
** * ** *
147552 CTTGAATACTCATACTAATCCCTATTCTTTTTGGGATTAGGTACTGTATGCATAGTCTTTTCTTT
444 CTTGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACTGTAAACATAGTCTTTTCATT
* *
147617 AGGATACACGATATTGATGTTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAA
509 AGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAA
* *
147682 AG-CATAACTTCGTGCCACAAATGAGACAAACATGGATTCTAA
571 AGTC-TAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAA
147724 ACGTGGATTT
Statistics
Matches: 1294, Mismatches: 211, Indels: 108
0.80 0.13 0.07
Matches are distributed among these distances:
936 75 0.06
937 59 0.05
938 426 0.33
939 30 0.02
940 103 0.08
941 184 0.14
942 17 0.01
943 2 0.00
944 4 0.00
946 47 0.04
947 327 0.25
948 20 0.02
ACGTcount: A:0.31, C:0.18, G:0.15, T:0.37
Consensus pattern (933 bp):
ATTCTTTTTAGGTTAGGCAGCATAACCAAAGTCTTCACATTAGGATACACGATATTGATGCTTTG
GTTTCGCAAGAAAGGCTTTTTCCCACCAATTTTTGTAAAGCTAATTTCGTGCCTTAAATGAGACA
AACATGGATTCTAGTAATGATTTCATTCATTTTGTGATTACGCACCATAACACATTCCCTTTTTT
AGGATAAATGATATTGATGATTTTCTTTTCCATGAAAATCTTTTTTTGCCCTATTTTCCTTCAAA
TCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCATAACAGTCTCCATTCTTTTAAAGAA
TGGGAACCAAAACGCAATCCCTTCATTAGGAAACATGCTATTGATGCTTTGGTGTCGCAAGAAAA
GCTTTTTTTCTACCATTTTTGATAAAATCAAAGTTTATCTCTAAAAAGACAAACTTGAATACTCA
TACTAATCCCTATTCTTTTCAGGATTAGGCACTGTAAACATAGTCTTTTCATTAGGATACATGAT
ATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGC
CTCAAATGAGACAAACATGGATTCTAATAATGATTATCATTCATTTTGTGATTAGGCACCATAAA
CACATTCTCCTCATTAGAAAAAATGATATTGATGATTTTTTTTCCATGGAAATCTCTTCTTTGCC
CTATTTTCCTTAAAATCAAAGTTAATCCCTTAAAGAAATAAGCATCGATTCTAGTAAAAGTCTCA
ATTCTTTCCAAGATTAAGAACCAAAATCCCAATCACTTCCTTAGGAGACATGACATTGATGCTTT
GGTGTTGCAACAAAAGCTTTTCTTTCCACCATTTTTGATAAAATCAAAGTTTATCTCCTAAATAA
GACAAACATGAAATGAAATCCTC
Found at i:149862 original size:948 final size:946
Alignment explanation
Indices: 147757--180119 Score: 23695
Period size: 948 Copynumber: 33.8 Consensus size: 946
147747 AACTTGCATG
* * * * * * *
147757 AATCCC-ATTCTTTTCCGGATTAGGCACCGTAAAGAAAGTCTTCTCCTCAGGATACACGGTATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * *
147821 ATGCTTTGATTTCGCAAGAAAGGCTTTCTTCCCACCAGTTTTAGTAAAGCCTAAGTTCGTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * * *
147886 AAATGATACAAACATGGATTCTAGTAATGAT-TATCATTTATTTAGTGATTAGGCACCGTAACCA
130 AAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACA
* ** * * ** *
147950 CTTTCTCCTTTTTAGGATAAACGA-ATTTGATGATTTTCTTTTGCATTAAAATCTTTTATTTGCC
194 CATTCTCCTTCATAGGATAAATGATA-TTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * * * * **
148014 CTATTTT-TTTAAAATCAAAGTTCATCCCCTAAATAA-AAAAGGCATCTATTCTTGTAACAGTCT
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAA-GCATCGATTCTCATAACAGTCT
* * ** * * * * *
148077 CCATTCTTTTAAAGAATGGGATGCTAAAACACATTCCCTTCTTTAGGAAACATG-CTGTTGATGC
322 CCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGAC-ATTGATGC
* * * * ** * * * *
148141 TTTGGTGTCGTAAGAAAAACTTTTGTTTCTACCGCTTTTGATAAAATCAAAGTTTATTTCCTAAA
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAA
* * *
148206 TAAGAC-AA-AC---T--TGC--ACGAAT-CCCATTCTTTTTC-GGATTAGGCACCGTAAACAAA
451 -AAGACAAACACGAATACT-CATACTAATCCCCATTC-TTTTCAGGATTAGGCACCATAAACATA
* * * * *
148260 GTCTTCTCATTGGGATACACAATATTGATGCTTTGGTTT-GCAAGAAAGGC-TTTCTTTCCACTA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTC-TCCCACCA
* *
148323 ATTTTAGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATAGATTCTAGTAATGAT-TATCA
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCA
* **
148387 TTCATTTTGTGATTAGGCACCG-TAAC-CACTTTCTCCTTTTTAGGATAAATGATATTGATGATT
641 TTCATTTTGTGATTAGGCA-CGATAACACA-TTT-TTCTCATTAGGATAAATGATATTGATGATT
* * ** *
148450 TTCTTTTGCATGAAAATCTTTTAATTGCCTTATTTTCCTT-AACATCAAAGTTCATTCCC-TAAA
703 TTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAA-ATCAAAGTTCA-TCCCATAAA
* *** ** * * * * * * * *
148513 TAAAAGGGGCATATATTCTCGTAACAGTCTCCATTCTTTTTAAAGAATGGGATGCTAAAACGCAT
766 TAAGACAAGCATCGATTCTCATAAAAGTCTCCATTC-TTTTCAAGATTGGGA-ACCAAAACACCT
* * * *** * * * * * *
148578 TCCCTTCTTTTGGAGACATGTTGTTGATGCTTTGGTGTTGTAAGAAAAACTTTTGTTTCTACCAT
829 TCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCAT
* * * * * *
148643 TTTTAATAGAACCAAAGTTTGTC-TCT-A-AAAGAAAAACTTGAATACTCATACT
893 TTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAG-ACAACATGAATACTCATACT
* * * * ** * *
148695 AATCCCCATTCTTTTTC-GGATTATGTATCATATGCATAGTCTTCTCATTATGATGCACGATATT
1 AATCCCTATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * * *
148759 GATGCTGTGGTTTTGAAAGAAAGACATTTTTCCCACCAACTTTTTGTAAAGCCTAACTTCGTGCC
65 GATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA-TTTTTGTAAAGCCTAAGTTCGTGCC
* * * * * * * *
148824 TCAACTGAGACAAATATGGATTCCAGTAATGATCCTCATTCGTTTTGTGCTTAGGTACGATAAAC
128 TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* * * *
148889 ACATTC-CCCTCATTAGGAAAAATGATATTGATGATTTTCTTTTGCGTGGAAATCTTTTC-TT-C
193 ACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * * * *
148951 CCTATTTTACTTCAAACCAAAGTTCATCCCATAAATAAGACAAGGATCGATTCTTATAACAGTCT
257 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * ** *
149016 CCATTATTTTGAAGATTGAGAAGCGAAAATGCATTCCCTTCATTAGGATG-CATGACATTGATGC
322 CCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGA-GACATGACATTGATGC
* * * * **
149080 TTTGGTGTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTTACAAAATCAAATTTTATCTCTTAAA
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAA
* * * *
149145 TAAGACAAACACAAATACTCATACCT-ATCCCCATTCTTTTTAGGATCAGGCACCATTAACATAG
451 -AAGACAAACACGAATACTCATA-CTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
** * * * * *
149209 TCTTCACATTTTGATACACGATATTAATGCTTTAGTTTCGCAAAAAAAGGCATTGCTCACACCAA
514 TCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGC-AAGAAAGGCATTTCTCCCACCAA
* * * * *
149274 TTTTTGAAAAGCCTAAGTTTGTGCCTCAAATGAGACAAACATGGGTTCTTA-TAATGATCTTCAT
578 TTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCAT
* * *
149338 TCATTTTGTGATTACGCACGATAACACATTTTTCTCAATAAGATAAATGATATTGATGA-TTT-T
642 TCATTTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCT
* * * *
149401 TTTCCATGGAAATCTTTTCTTTGCCCTATTTTTCTTGAAATCAAAGTTCATGCCAGAAACAAGAC
707 TTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGAC
* * *
149466 AAGCATCGATTCTCATAAGAGTCTCCATTCTTTTCGAGATTGGGAACCAAACACACCTTTACTTC
772 AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTC
* * *** *
149531 ATTAGGAGACAAGACATTGATGCTTCGGTGTC-CTAAGAAAGCCTTTTCTTCCCAAGGTTTTTGG
836 ATTAGGAGACATGACATTGATGCTTTGGTGTCGC-AAGAAAG-CTTTTCTTCCCACCATTTTTGA
* *
149595 TAGAATCAAGGTTTGTCTTTTGAGAAAGACGAACACGAATACTCATACT
899 TAGAATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * * * *
149644 AATCCATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * *
149709 ATGCTTTGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
*
149774 AAATGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
130 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
* * *
149839 ATTCTCCTTGATAGGATAAATGATATTGATGATTTTCTTTTCCACGAAAATCTTTTCTTTGCCCT
195 ATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * *
149904 ATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCA
260 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
** * * *
149969 TTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTT
325 TTCTTTTGAAGATTGGGAACCCAAAACACCTTC-CCTTCATTAGGAGACATGACATTGATGCTTT
* * * *
150033 GGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGA
389 GGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTAT-CTCTTAA-AA
* * * * *
150097 AGACATACATGAATAATCATAATAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCT
452 AGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
* * *
150162 TCACATTAAGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTT
517 TCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATTTT
* * * * * *
150227 TGTAAAGCCTAAGTTTGTGCCTTAAATAAGACAATCATGGGTTCTTA-CAATGATCTTCATTCAT
582 TGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCAT
* * * *
150291 TTTGTGATTATGCTA-GATAACACTTTTTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTT
646 TTTGTGATTAGGC-ACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTT
*
150353 CCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAG
710 CCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAG
* * * *
150418 CATTGATTCTCATAATAGTCTCCATTCTTTTCGAGATTGGGAACCAAACACACCTTCACATCATT
775 CATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATT
* * *** *
150483 AGGAGACAAGACATTGATG-TTCGGTGTC-CTAAGAAAGCCTTTTCTTCCCAAGGTTTTTGGTAG
839 AGGAGACATGACATTGATGCTTTGGTGTCGC-AAGAAAG-CTTTTCTTCCCACCATTTTTGATAG
*
150546 AATCAAGGTTTGTCTTTTAAGAAAGACGAACACGAATACTCATACT
902 AATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * * * *
150592 AATCCATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * *
150657 ATGCTTTGGTTTTGCAAGAAAGGCTTTTAGCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTC
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
*
150722 AAATGAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
130 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
** * *
150787 ATTCTCCTTGTTAGGATAAATGATATTGATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCT
195 ATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * *
150852 ATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCA
260 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
** * * *
150917 TTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTT
325 TTCTTTTGAAGATTGGGAACCCAAAACACCTTC-CCTTCATTAGGAGACATGACATTGATGCTTT
* * * *
150981 GGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGA
389 GGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTAT-CTCTTAA-AA
* * * * *
151045 AGACATACATGAATAATCATAATAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCT
452 AGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
* * *
151110 TCACATTAAGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTT
517 TCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATTTT
* * * * *
151175 TGTAAAGCCTAAGTTTGTGCCTTAAATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCAT
582 TGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCAT
* * * * * *
151239 TTTGGGATTATGCAAGATAACACTTTTTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTC
646 TTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTC
*
151302 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGC
711 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGC
* * *
151367 ATTGATTCTCATAACAGTCTCCATTCTTTTCGAGATTGGGAACCAAACACACCTTCACTTCATTA
776 ATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTA
* * * *** *
151432 GGAGACAAGACATTGATG-TTCGGTGTCACAAGAAAGCCTTTTCTTCCCAAGGTTTTTGATACAA
840 GGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAA
* *
151496 TCAAGGTTTGTCTTTTGAGAAAGACGAACACGAATACTCATACT
904 TCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * * *
151540 AATCCCTATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTTTTATTAGGATCCATGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * *
151605 ATGCTTCGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTATGTTCATGCCTC
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* *
151670 AAATAAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
130 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
** * *
151735 ATTCTCCTTGTTAGGATAAATGATATTGATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCT
195 ATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * *
151800 ATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCA
260 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
** * * *
151865 TTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTT
325 TTCTTTTGAAGATTGGGAACCCAAAACACCTTC-CCTTCATTAGGAGACATGACATTGATGCTTT
* * * *
151929 GGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGA
389 GGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTAT-CTCTTAA-AA
* * * *
151993 AGACAAACATGAATAATCATAATAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCT
452 AGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
* * *
152058 TCACATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTT
517 TCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATTTT
* * * * * *
152123 TTTAAAGCCTAAGTTTGTGCCTTAAATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCAT
582 TGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCAT
** * *
152187 TTTGTGATTACACACGATAACACATTTTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTC
646 TTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTC
*
152250 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGC
711 CATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGC
* * *
152315 ATCGATTCTCATAAGAGTCTCCATTCTTTACGAGATTGGGAACCAAACACACCTTCACTTCATTA
776 ATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTA
* * ** *
152380 GGAGACATGATATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTCCCACGGTTTTTAATAGAA
840 GGAGACATGACATTGATGCTTTGGTGTCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAA
* * * * *
152445 TCATGTTTTGTCTCTTAAGAAAGACAAACAAGAATACTGATACT
904 TCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
** * * * **
152489 AATCATTATTCTTTTCAGGATTAGGCACCATAACCATAGTCTTCTCATTAGAATCCGTGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * * * *
152554 ATGCTTCGGTTTTGCAAGAGAGGCTTTTATCCCACCAGTTTTTGTAAAGTCTCATTTCGTGTCTC
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
*
152619 AAATGAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGCA
130 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA-CA
* * * * *
152683 CATTAT-TTTCTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAAT-TTTTC--TGCC
194 CATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * *
152744 CTATTTTCCTTTG-AATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCT
258 CTATTTTCC-TTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * ***** * * *
152808 CCATTC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGC
322 CCATTCTTTTGAA-GATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* * * * * * *
152872 TTTGGTGCCACAAGAAAAGCTTTTCTTTCTACCATTTTTGATAAAATCAAAGTTTATTTCCTAAA
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAA
* * * *
152937 TAAGAC-AA-AC---T--TGC--ACGAAT-CCCATTCTTTATCA-GATTAGGCAGCGTAAACAAA
451 -AAGACAAACACGAATACT-CATACTAATCCCCATTCTTT-TCAGGATTAGGCACCATAAACATA
** * * * *
152991 GTCTTCTTATTTGGATGCACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCTACCA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTC-TCCCACCA
* * *
153055 ATTTTAGTAAAGTTTAAGTTCGTGCCTTAGAA-GAGACAAATATGGATTCTAGTAATGAT-TATC
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTA-AATGAGACAAACATGGATTCTAGTAATGATCT-TC
* * * *
153118 ATTCAATTTGTGATTAGGCACCATAAACACA-TTCTCTCCACTAGGATAAATGATATTGATGATT
640 ATTCATTTTGTGATTAGGCACGAT-AACACATTTTTCT-CATTAGGATAAATGATATTGATGATT
* * * *
153182 TTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAGATA
703 TTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATA
* * * * * *
153247 AGACAAGGATCGATTCTCGTAAAAGTCTCCATACTTTCCAAGATTAGGAACCAGAAACACCTTTA
768 AGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA-AAACACCTTCA
* * * * * *
153312 CTTCCTTAGGAGACATGACATTGACGCTTTGGTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTA
832 CTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTT
* * * *
153377 TGATAGAATCAAGGTTTGTCTTTTAAGTATGACATACATGAATAATCATAAT
896 TGATAGAATCAAGGTTTGTCTTTTAAGAAAGACA-ACATGAATACTCATACT
* * * *
153429 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCGCATTAAGATACACGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * * * *
153494 ATGCTTTGGTCTCGCAAGAAAGGCATTTTTTCCTCCAATTTTTTTAAAGCCTAAGTTTGTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * *
153559 AAATAAGACAAACATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AACA
130 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* * *
153622 CATTTTTC-TCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCC
194 CATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * * * *
153684 CTATTTTTCTTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCGATTCTCATAAGAGTCTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
** *
153749 CATTCTTTTCG-AGATTGGGAA-CCAAACACACCTTTACTTCATTAGGAGACAAGACATTGATGC
323 CATTCTTTT-GAAGATTGGGAACCCAAA-ACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* * *** * * *
153812 TTCGGTGTC-CTAAG-AAAGCCTTTTCTTCCCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTG
386 TTTGGTGTCGC-AAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTT-
* * **
153875 AGAAAGACGAACACGAATACTCATACTAATCCATATTCTTTTCAGGATTAGGCACCATAAACATA
448 AAAAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
* ** * * * * *
153940 GTCTACTTATTAGCATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTAC-CCCACCA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-CTCCCACCA
* * * *
154004 ATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACGTGGATTCTAGTAGTGATCTTCAT
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCAT
* * * *
154069 TCATTTTGTGATTAGGCACCATAAACACATTCTCCTTGA-TAGGATAAATGATATTGATGATTTT
642 TCATTTTGTGATTAGGCACGAT-AACACATTTTTC-TCATTAGGATAAATGATATTGATGATTTT
* * * *
154133 CTTTTCCACGAAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAG
705 CTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAG
* *
154198 ACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACT
770 ACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCAC-
* **
154263 TTC-TTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTTT
833 TTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTT
** * * *
154327 GATAGAATCAAGGTTT-TCCACTTAAGGAAGACATACATGAATAATCATAAT
897 GATAGAATCAAGGTTTGT-CTTTTAAGAAAGACA-ACATGAATACTCATACT
* * * *
154378 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * *
154443 ATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * * * *
154508 AAATAAGACAATCATGGGTTCTTA-CAATGATCTTCATTCATTTTGTGATTATGCTA-GAT-AAC
130 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGC-ACCATAAAC
* * * *
154570 ACTTTTTTC-TCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGC
193 ACATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * *
154632 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAATAGTCT
257 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * *
154697 CCATTCTTTTCG-AGATTGGGAA-CCAAACACACCTTCACATCATTAGGAGACAAGACATTGATG
322 CCATTCTTTT-GAAGATTGGGAACCCAAA-ACACCTTCCCTTCATTAGGAGACATGACATTGATG
* * *** * * *
154760 -TTCGGTGTC-CTAAG-AAAGCCTTTTCTTCCCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTT
385 CTTTGGTGTCGC-AAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTT
* **
154822 AAGAAAGACGAACACGAATACTCATACTAATCCATATTCTTTTCAGGATTAGGCACCATAAACAT
448 AA-AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACAT
* ** * * * * * **
154887 AGTCTACTTATTAGCATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTAGCCCACCA
512 AGTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCA
* * *
154952 ATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACGTGGATTCTAGTAATGATCTTCAT
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCAT
* * * **
155017 TCATTTTGTGATTAGGCACCATAAACACATTCTCCTTGTTAGGATAAATGATATTGATGATTTTC
642 TCATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTC
* * * *
155082 TTTTCCACGGAAATCATTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGA
706 TTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGA
* *
155147 CAAGCATCGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTT
771 CAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCAC-T
* **
155212 TC-TTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTG
834 TCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTG
** * * *
155276 ATAGAATCAAGGTTT-TCCACTTAAGGAAGACATACATGAATAATCATAAT
898 ATAGAATCAAGGTTTGT-CTTTTAAGAAAGACA-ACATGAATACTCATACT
* * * *
155326 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * *
155391 ATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * * * **
155456 AAATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGGGATTATGCAAGAT-AACA
130 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* * * *
155519 CTTTTTTC-TCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCC
194 CATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* *
155581 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAACAGTCTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* *
155646 CATTCTTTTCG-AGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACAAGACATTGATG-
323 CATTCTTTT-GAAGATTGGGAACCCAAA-ACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* * * *** * * *
155708 TTCGGTGTCACAAG-AAAGCCTTTTCTTCCCAAGGTTTTTGATACAATCAAGGTTTGTCTTTTGA
386 TTTGGTGTCGCAAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTT-A
* * * *
155772 GAAAGACGAACACGAATACTCATACTAATCCCTATTCTTTTCTGGATTAGGCACCATAAACATAG
449 AAAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
*** * * * * *
155837 TCTTTTTATTAGGATCCATGATATTGATGCTTCGGTTTTGCAAGAAAGGCTTTTAC-CCCACCAA
514 TCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-CTCCCACCAA
* * * * *
155901 TTTTTGTAAAGTCTATGTTCATGCCTCAAATAAGACAAACGTGGATTCTAGTAATGATCTTCATT
578 TTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATT
* * * **
155966 CATTTTGTGATTAGGCACCATAAACACATTCTCCTTGTTAGGATAAATGATATTGATGATTTTCT
643 CATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCT
* * * *
156031 TTTCCACGGAAATCATTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCATAAATAAGAC
707 TTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGAC
* *
156096 AAGCATCGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTT
772 AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCAC-TT
* **
156161 C-TTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGA
835 CATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGA
** * * *
156225 TAGAATCAAGGTTT-TCCACTTAAGGAAGACAAACATGAATAATCATAAT
899 TAGAATCAAGGTTTGT-CTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * *
156274 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACATGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * *
156339 ATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * ** *
156404 AAATAAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACGAT-AACA
130 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* * *
156467 CATTTTTC-TCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCC
194 CATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* *
156529 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * *
156594 CATTCTTTACG-AGATTGGGAA-CCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGC
323 CATTCTTT-TGAAGATTGGGAACCCAAA-ACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* * * ** * * * *
156657 TTTGGTGTTGCAAGAGAAGCTTTTCTTCCCACGGTTTTTAATAGAATCATGTTTTGTCTCTTAAG
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA-
* * *** *
156722 AAAGACAAACAAGAATACTGATACTAATCATTATTCTTTTCAGGATTAGGCACCATAACCATAGT
450 AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * ** * * * * * *
156787 CTTCTCATTAGAATCCGTGATATTGATGCTTCGGTTTTGCAAGAGAGGCTTTTATCCCACCAGTT
515 CTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATT
* * * * *
156852 TTTGTAAAGTCTCATTTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAGTGATCTTCATTCA
580 TTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* * * *
156917 TTTTGTGATTAGGCACCAAAAGCACATTATTT-TCTTTAGGAAAAATGATATTGATGATTTTCTT
645 TTTTGTGATTAGGCACGATAA-CACATT-TTTCTCATTAGGATAAATGATATTGATGATTTTCTT
* * *
156981 TTGCATGGAAAT-TTTTC--TGCCCTATTTTCCTTTG-AATCAAAGTTCATCCCTTATATAAGAC
708 TTCCATGGAAATCTTTTCTTTGCCCTATTTTCC-TTGAAATCAAAGTTCATCCCATAAATAAGAC
* * * ***** *
157042 AAGCATCGATTCTCGTAACAGTCTCCATTC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTT
772 AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTT
* * * * ** * *
157106 CTTTAAGATACATGACATTGATGCTTTGGTGCCATAAGAAAAGCTTTTCTTTCTACCATTTTTGA
835 CATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGA
* * * * * *
157171 TAAAATCAAAGTTTAT-TTCCTAA-ATAAGACAA-ACT---T--GC--ACG
899 TAGAATCAAGGTTTGTCTT-TTAAGA-AAGACAACA-TGAATACTCATACT
* * * * * *
157212 AATCCC-ATTCTTTATCA-GATTAGGCAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATT
1 AATCCCTATTCTTT-TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
** * * **
157275 GATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCTACCAATTTTAGTAAAGTTTAAGTTCGTGCCT
65 GATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
* * *
157340 TAGAA-GAGACAAATATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAA
129 CA-AATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAA
*
157403 CACATTCT-CTCCACTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTG
192 CACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTG
* * * * * * *
157467 CCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCGATTCTCGTAAAAGTC
256 CCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* ** * ** * *
157532 TCCATACTTTCCAAGATTAGGAA-CCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGACG
321 TCCATTCTTTTGAAGATTGGGAACCCA-AAACACCTTCCCTTCATTAGGAGACATGACATTGATG
* * * * *
157596 CTTTGGTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTATGATAGAATCAAGGTTTGTCTTTTAA
385 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA
* * * * * * *
157661 GTATGACATACATGAATAATCATAATAATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAG
450 -AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAG
* * * * * *
157726 TCTTCGCATTAAGATACACGATATTGATGCTTTGGTCTCGCAAGAAAGGCATTTTTTCCTCCAAT
514 TCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAAT
* * * * * *
157791 TTTTTTAAAGCCTAAGTTTGTGCCTTAAATAAGACAATCATGGGTTCTTA-TAATGATCTTCATT
579 TTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATT
* * *
157855 CATTTTGTGATTACGCACGATAACACATTTTTCTCAATAAGATAAATGATATTGATGA-TTT-TT
643 CATTTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTT
*
157918 TTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACA
708 TTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACA
* * *
157983 AGCATCGATTCTCATAAGAGTCTCCATTCTTTACGAGATTGGGAACCAAACACACCTTCACTTCA
773 AGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCA
* * ** *
158048 TTAGGAGACATGATATTGATGCTTTGGTGTTGCAAGAGAAGCTTTTCTTCCCACGTTTTTTAATA
837 TTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATA
* * * *
158113 GAATCAAGTTTTGTCTCTTAAGAAAGACAAACAAGAATACTGATACT
901 GAATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
** * **
158160 AATCATTATTCTTTTCAGGATTAGGCACCAT-AACAATAGTCTTCTCATTAGAATACGTGATATT
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAAC-ATAGTCTTCTCATTAGGATACACGATATT
** * * * * * *
158224 GATGCTTCAGTTTTGCAAGATAGGCTTTTAACCCACCAGTTTTTGTAAAGTCTAATTTCGTGTCT
65 GATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
*
158289 CAAATGAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGC
129 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA-C
* * * * *
158353 ACATTAT-TTTCTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAAT-TTTTC--TGC
193 ACATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * *
158414 CCTATTTTCCTTTG-AATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTC
257 CCTATTTTCC-TTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* * * ***** * * *
158478 TCCATTC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATG
321 TCCATTCTTTTGAA-GATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATG
* * * * * * *
158542 CTTTGGTGTCACAAGAAAAGCTTTTCTTTCTACCATTTTTTATAAAATCAAAGTTTATTTCCTAA
385 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA
** * * * * *
158607 ATAAGAC-AA-AC---T--T-GGACGAAT-CCCATTCTTTATCA-GATTAGGTAGCGTAAACAAA
450 A-AAGACAAACACGAATACTCATACTAATCCCCATTCTTT-TCAGGATTAGGCACCATAAACATA
** * * * *
158662 GTCTTCTTATTTGGATGCACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCTTCCTACCA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTC-TCCCACCA
* *
158726 ATTTTAGTAAAGTCTAAGTGCGTGCCTTAGAA-GAGACAAACATGGATTCTAGTAATGAT-TATC
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTA-AATGAGACAAACATGGATTCTAGTAATGATCT-TC
* * * * *
158789 ATTCAATTTGTGATTAGGCACCATAAACACA-TTCTCTCCACTGGGATAAATGATATTGATGATT
640 ATTCATTTTGTGATTAGGCACGAT-AACACATTTTTCT-CATTAGGATAAATGATATTGATGATT
* * * * * **
158853 TTTTTTTCCTTGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAGTTA
703 TTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATA
* * * * *
158918 AGACAAGGATCGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTAGGAACCAGAAACACCTTTA
768 AGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCA-AAACACCTTCA
* * * * * * *
158983 CTTCCTTAGGAGACATGACATTGACGCTTTAGTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTG
832 CTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTT
* * * * *
159048 TGATAGAATCAAGGTTTGTCTCTTAAGTATGACATACATGAATAATCATAAT
896 TGATAGAATCAAGGTTTGTCTTTTAAGAAAGACA-ACATGAATACTCATACT
* * * *
159100 AATCCGCT-TTCTTTTCAAGATTAGGCACCAGAAACATAGTCTTCGCATTAAGATACACGATATT
1 AATCC-CTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * * *
159164 GATGCTTTGGTCTCGCAAGAAAGGCATTTTTTCCTCCAATTTTTGTAAAGCCTAAGTT-GTGCCT
65 GATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
* * * **
159228 TAAATGAGACAAACATGGACTCTTA-TAACGATCTTCATTCATTTTGTGATTACACACCAT-AAC
129 CAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* * *
159291 ACATTCTCC-CCATTAGGATAAATGATATTGATGATTTTCTTTTCTATGAAAATCTTTTCTTTGC
193 ACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * * * *
159355 CCTATTTTTCTTGAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTTTAATACCAGTCT
257 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * *
159420 CCATTCTTTTCG-AGATTGGGAACCAAAAACACC-TCCACTTCATTAGGAAATATGATATTGATG
322 CCATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCC-CTTCATTAGGAGACATGACATTGATG
* * * ** *
159483 CTTTGGTGTCGCAAGAGAAGCTTTTATTCCCACGGTTTTTGATAGAATCAAGATTTATC-CTTTA
385 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTC-TTA
* * * *
159547 AGAAAGACAATCAAGAATGCTCATACTAATCCCTATTCTTTTC-GAGATTAGGCACCATAAACAT
449 A-AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAG-GATTAGGCACCATAAACAT
* * * * * * * *
159611 AGTATTCTCATTAAGATCCATGATATTGATGCTTTGGTTTTGCGAGAAAGGC-TTTTTCCCCACC
512 AGTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCT-CCCACC
* * *
159675 AATTTTTGCAAAGTCTAAGTTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCA
576 AATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCA
* * *
159740 TTCATTTTGTGATTAGGCACCG-TAAATACATTCTTT-TCATTAGGAAAAATGTTATTGATGATT
641 TTCATTTTGTGATTAGGCA-CGAT-AACACATT-TTTCTCATTAGGATAAATGATATTGATGATT
* * * *
159803 TTCTTTTGCGTGGAAATC-TTT-TTTGCCCTATTTTCCTTCG-AATCAAAGTTCATTCCTTAAAT
703 TTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-GAAATCAAAGTTCATCCCATAAAT
* * * * * * **
159865 AAGACAAGCATCGATTCTCGTAACAGTCTCTATTCTTTT-AAGGATTAGGAAGCTAAAACGCAAT
767 AAGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAACACCTT
* * * * * * * *
159929 CCCTTCTTTAGGATACATGACACTGATGCTTTGGTGTCGCAAGAAAAACTTTTGTTTCTACCATT
830 CACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATT
* * * * *
159994 TTCT-ATAGAACCAAAGTTTGTC-TCT-A-AAAGGCAAACTTGAATACTCATACT
894 TT-TGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
** * ** *
160045 AATCCCTATTCTTTTTTGGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACGCGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * *
160110 ATGCTTTGGTTTTGCAAAAAAGGCATTTTTCTCACCAATTTTTTGTAAAGCCTAACTTCGTGCCT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA-TTTTTGTAAAGCCTAAGTTCGTGCCT
* * * *
160175 CAAATGAGGCAAACATGGACTCTAGTAATGATCTTCATTCATTTTGTGATTATGTACCATAAACA
129 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* * * * * *
160240 CATTC-CCCTCTTTAGGAAAAATGATATTGATGATTTTCTTTTACATGAAAATGTTTTC--TGCC
194 CATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * * * * ** *
160302 CTATTTTCCTTCAAACCAAAGTTTATCCCTTAAATAAGACAAGGATTTATTCTTATAACAGTCTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * * * * *
160367 CATTCTTTTAAAGATTGAGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTT
323 CATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGCTT
* * * * *
160432 TGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTACAAAATCAAAGTTTATCTATTAAATA
388 TGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAA-A
* ** * * * * *
160497 AAACAAACACGTTTACTCATACTAATCCCCATACTTTTTACGATTAGGCACTATTAACATAGTCT
452 AGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
** * * * * * *
160562 TCACATTTTGATGCACGATATTGATGCTTTAGTTTCGCAAAAAAAGGTATTTTTCCTACCAATTT
517 TCACATTAGGATACACGATATTGATGCTTTGGTTTCGC-AAGAAAGGCATTTCTCCCACCAATTT
* *
160627 TTGTAAAGCCTAAGTTTGTGCCTTAAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCA
581 TTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCA
* * * * *
160691 TTTTGTGATTATGCACCATATCACATTTTCCTCATTAGGATAAATGATTTTGATGA-TTT-TTTT
645 TTTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* * *
160754 CCATGGAAATCTTTT-TTTGCCCTATTTTCCTTGAAATCGAAGTTCATCCC-TAAAACAAAACAA
710 CCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCAT-AAATAAGACAA
* * * *
160817 GCATCGATTCTCATAATAGTCACCATTTTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCAT
774 GCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCAT
* * * * *
160882 TGGGAGACATGACATTGATGCTTTGGTGTCGTAAGAAAGCCTTTTCTTCTCACGATTTTTGATAC
838 TAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAG
* * *
160947 AATCAAGGTTTGTCTTTTAAGAAAGACAAACACGAATATTTATACT
902 AATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * * * *
160993 AATCCCTATTATTTTCAGGATTAAGCACCATAAACGTAGTCTTCTTATTAGGATCCACAATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * *
161058 ATGGTTTGGTTTTGCAAGAAAGGCTTTTATCCCACAAATTTTTGTAAAGTCTAAGTTCATGCCTC
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* *
161123 AAATGAAACAAACATGGATTCTAGTAATGATCTTCATTCAATTTGTGATTAGGCACCATAAACAC
130 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
* *
161188 ATTCTTC-TCATTAGGATAAAAGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCC
195 ATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCC
* * * **
161250 TATTTTCCTTGAAATCAAAGTTCATCCCTTAAACAAGACAAGCATTGATTCTCATAGTAGTCTCC
259 TATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCC
* * * * **
161315 ATTCTTTTCG-AGATTGGGAACCAAAAACACGTTCACTTCATTAGGAGACAAGACACAGATGCTT
324 ATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGCTT
* * **** * * *
161379 TGGTGCCGCAAG-AAAGCCTTTTCTTCCCTTGGTTTTTGATACAATCAAGGTTTGTCTTTTAAGA
388 TGGTGTCGCAAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA-A
* *
161443 AAGACAAACACGAATACTCATATTAATCCCAATTCTTTTCAGGATTAGGCACCATAAACATAGTC
451 AAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTC
* ** *
161508 CTCTTATTAGGATACACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTCCTCCCACCAATT
516 TTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-CTCCCACCAATT
* * *
161572 TTAGTAAAGTCTATGTTCGTGCCTTAAAAGAGACAAACATGGATTCTA-TAAATGAT-TATCATT
580 TTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGT-AATGATCT-TCATT
* * * *
161635 CATTTTGTGATTAGGCACCG-TAAACACATTCTACTCTTTAGGATAAA-GATATTGATGGTTTTC
643 CATTTTGTGATTAGGCA-CGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTC
* * * *
161698 TTTTCCATGGAAATTTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAATAAGA
706 TTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGA
* * * * * *
161763 TAAGTATTGATTCTCGTAAAAGTCTCAATTCTTTCCAAGATTGGGAACCAAAA-ATCCCTTCACT
771 CAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAACA--CCTTCACT
* * * *
161827 TCCTTAGGAGACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTTG
834 TCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTG
* * * * * * *
161892 GTAGAATCAAGGTTTGTCTCTTAAGTAAGACAACCTGACTAATCATAAT
898 ATAGAATCAAGGTTTGTCTTTTAAGAAAGACAACATGAATACTCATACT
* *
161941 AATCCCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTT-TGCATTAGGATACACGATATT
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCT-CATTAGGATACACGATATT
* * *** * *
162005 GATGTTTTAGTTTCATAAGAAAGGCATTTCTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCT
65 GATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
* ** *
162070 CAAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCAATTTACGATTACGCACCAT-AAC
129 CAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* *
162133 ACATT-TCC-TCATTGGGATAAATGATATTGATGACTTTCTTTTCCATGGAAATCTTTTCTTTGC
193 ACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * * * *
162196 CCTATTTTCCTTGAAATCAAAGTTCATCCCTTAAACAAGACAAGCATTGATTCTCATAATAGCCT
257 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * *
162261 TCATTCTTTTCG-AGATTGGGAACCAAAAACACCTTCACTTCATTAGGAAACATGACACTGATGC
322 CCATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* * * * * * *
162325 TTTGGTGTCGTAAG-AAAGCCTTT-TATCC-CCATGGTTTTTGATACAATTC-GGGTTTGTCTTT
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCA---TTTTTGATAGAA-TCAAGGTTTATCTCT
* * *
162386 TAAGAAAGACAAACACGAATACTCATACTAATGCCTATTCTTTTCAGGATTAGGCACCATAAATG
447 TAA-AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAA-C
* ** ** * ** ** **** **
162451 TTAGGATCTT--GGTTTTGATATAAC-A-AAGGATAG-AATAAAATCG---GAAA-TTATTTTGA
510 ATA-G-TCTTCACATTAGGATA-CACGATATTGAT-GCTTTGGTTTCGCAAGAAAGGCA-TTT--
* * ** * * ** *
162507 AAATACCAAAAATGTGTTT-TATTCAA-T-TAAGTAC-T--TTATAAATTTTGTACCAAATGATT
568 --CTCCCACCAAT-T-TTTGTA---AAGTCTAAGTTCGTGCCT-TAAA-TGAG-A-CAAA-CA--
* ** * * * * ** *
162566 TTTGATTC-ACCAAATG-TTTTCTAGTTAAGTATAAATGT-TTTCAAGG--CTTTAA-ATGATTA
619 -TGGATTCTA-GTAATGATCTTC-A-TTCA-T-T--TTGTGATT--AGGCACGATAACA-CATT-
* ** * * * * * * ** ** *
162625 ATTTCTAAGTTAAAATATATCAAAGTATCGATACATAGGTATT-TGTATCGATACATTAAGATTG
672 -TTTCTCA-TTAGGATAAAT--GA-TATTGAT-GAT---T-TTCT-TTTCCATGGA--AATCTTT
* * * ** * ** * * * * *
162689 ACTTAG-GCTAAAATT-GTCAAAACCCTTAAATGTATCGAT-ACATGAA-AA-ATATGCATCGAT
724 TCTTTGCCCT-ATTTTCCTTGAAA---TCAAA-GT-TC-ATCCCATAAATAAGACAAGCATCGAT
* ** ** * * *** ** * ** ** **
162749 ACATGTCATTGGGATTTCTTGGCAGTAGCTAAACTTGTATCGATACACC-AAGTATGTATCGA-T
782 ---TCTCA-T-AAAAGTC-T-CCA-T-TCTTTTCAAG-ATTGGGA-ACCAAAACACCT-TC-ACT
* * * * * * *
162812 ACAATGTATCGATACATCAAAAATTGTATCGATACATTGGCT-T-GTAACG---GCTATATT-TT
834 TC-AT-TA-GGAGACAT--GACATTG-AT-G---CTTTGG-TGTCGCAA-GAAAGCT-T-TTCTT
* ** * * * *** * ** ** *
162871 -CAAATATGTATCGATA-CATCAAAAATTGTATCGATACATTTGCACGGGA-AATCATTAAAATA
885 CCCACCAT-TTTTGATAGAATCAAGGTTTGTCT-TTTA-A---G-A-AAGACAA-CA-T-GAAT-
*
162933 AGCTCCAAAC-
938 A-CT-CATACT
* * * *** * * * * * * * *
162943 AA-GCCAATAACGGCT-A-GA--A-ACTCCACTAATCA-A-AC-TC-CAAT-GGCTACAACAACA
1 AATCCCTAT-TCTTTTCAGGATTAGGCACCA-TAAACATAGTCTTCTCATTAGGATAC-ACGATA
* * * * **** *
162997 TTGAAGCCTATAAATAAGAGCTTCCAGTAGCAAAACACAACAAGAGAGAAGTAGAACCAAGCAAG
63 TTGATG-CT-T---T--G-G-TT----TTG-------CAAGAA-AG-G--CTTTTTCC---C-AC
* * * * * * * ** * * **** * ***
163062 AAACATCTAGCATTCAAAGTTTTCAAAGATCAAAGTGTTTTATATTTTTCAAAAGCTTTTGTTCA
100 CAA-TTTTTG---T-AAAG---CCTAAGTTC---GTGCCTCAAATGAGAC-AAA-CATGGATTC-
* * * * * * * * **
163127 TATTGTTATTATTTTCTAAGCTCTTTGTATTTGATTTTGAGCTTAAATTCCCACAAACACA--AG
151 TA--GTAATGATCTTC--A-TTCATT-T-TGTGA-TTAG-GC----A---CCATAAACACATTCT
*** * * ** * * **
163190 CCTAGTTAGAGACAAACTTTG-TTTGTAGAAAAATCTTTGTTGT-CAT--ATAAGGTTGTGGTAA
200 CCTTCATAG-GATAAA---TGATAT-T-G-ATGAT-TTTCTTTTCCATGGA-AATCTT-T--T--
* **** * * * * **** * * * * * *
163251 ACCTTGAGAGAGAATCTCTTTGGAACTTGTGGTAT-AGTTCGCA-AAGAGATTG-TAAG-GTTG-
251 --CTT-TGCCCTATTTTCCTT-GAAATCAAAGT-TCA--TCCCATAA-ATA-AGACAAGCATCGA
* * **** * * **** * *
163311 GTATC-T-A-AG-C-CCGTAAAAAATATG-AG-TT-GTAA--GGTTACACCTTTGCCTT-A-AAG
307 TTCTCATAACAGTCTCC---ATTCTTTTGAAGATTGGGAACCCAAAACACC-TTCCCTTCATTAG
* * * * * ** * **** * * ** *****
163364 GCA-ATCAAT-TCGATT-AGTGAATTGGGTAATCACTCGACAAG--GAAGTGTCAAGGAGAGAGG
368 G-AGA-C-ATGAC-ATTGA-TG-CTTTGGT-GTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG
* * * * * * ***** * *
163424 ACGTAG-GTGC-CGTGTTTGGACCGAACCTCTATAAATATCTTGTGTC-AAGT--T-TTCCT--T
426 A--TAGAAT-CAAG-GTTT--ATC---TCT-TAAAAAGA-C-AAACACGAA-TACTCATACTAAT
* * * * * * ** *** *
163481 CCCTAATCCCTTTTCA-AATTTGTTCA--A-AACCCGAAAATTCGA-A--AAGA-AC-C-A-ATT
478 CCC-CAT-TCTTTTCAGGATTAG-GCACCATAAACATAGTCTTC-ACATTAGGATACACGATATT
* ** ** **** * * * *
163535 CACCCCCCCTCTTGG-TTCGTTACTTGATAA-GC-TTTCAATAAACATAGTCTTCTTATTAGGAT
539 GA----TGCT-TTGGTTTCG---CAAGA-AAGGCATTTCTCCCACCA-A-T-TT-TTGTAAAG-T
* *** ** * * ** ** * ** *
163597 ACATGATA-TT-GATGCTTTGGTTTCG-CAAGA-AAGGCTTTCTTCCCACCAATTTTAGTAAAGT
590 -C-T-A-AGTTCG-TGCCTTAAATGAGACAA-ACATGG-ATTC-T---AGTAATGAT-CTTCATT
* * * * *
163658 CTATGTTCGTGCCTTAAAAGAGACAAACATGGATTCTAGAAGTGATTATCATTCATTTTGTGATT
643 C-AT-TTTGTG-ATT---AG-G-C--AC---GA---T---A---A-CA-CA-T--TTTTCTCATT
** * * *** * *
163723 AGGCATCGTAAACACATTCTCCTCTTTAGGATAAAGATATTGATGACTTTTTTCCATGGAAATCT
681 AGG-A---T--A-A-A---TGAT-ATT--GAT---GAT-TT--T--C-TTTTCCATGGAAAT-CT
* * * * *
163788 TTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAATAAGACAAGCTTCGATTCTCG
722 TTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCA
* * * *
163853 TAAAAGTCTCTATT-TTTTCCAATATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGACATGA
787 TAAAAGTCTCCATTCTTTT-CAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGA
* *
163917 CATTGATGCTTTAGG-GTCGCAAGAAATGCTTTTCTTTCCACCATTTTTGATAAAATCAAGGTTT
850 CATTGATGCTTT-GGTGTCGCAAGAAA-GCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTT
* * * *
163981 GTCTCTTAAGTACAATA-TACATGAATAATCATAAC-
913 GTCTTTTAAG-A-AAGACAACATGAATACTCAT-ACT
* ** * * *
164016 AATCCCCATTCTTTTCAATATTAGGCACCATAAACAGAGTCTTCACATTAGAATACACGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * *
164081 ATGCTTTGGTTTCGCAAGAATA-GCATTTTTCTCACCAATTTTTGTAAAGCCTAAGTTTGTGCCT
66 ATGCTTTGGTTTTGCAAGAA-AGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
* * *
164145 TAAATGAGACAAACATGGATTCTTGTAATGATCTTCATTCATTTTGTGATTACGCACCAT-AACA
129 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* *
164209 CATTCTCC-TCATTAGGATAAGTGATATTGATGATTTTCTTTTTCATGGAAATCTTTTCTTTGCC
194 CATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * *
164273 CTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTTTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* ** * *
164338 CATTATTTTCCAGATTGGGAACCAAAAACACC-TCCACTTCATTAGGAGAC-TGATATTGATGCT
323 CATTCTTTTGAAGATTGGGAACCCAAAACACCTTCC-CTTCATTAGGAGACATGACATTGATGCT
* * *
164401 TTGGTGTCGCAAGAGAAGCTTTT-TTCCCCACGATTTTTGATAG-A--AA-----A-CTC--AAG
387 TTGGTGTCGCAAGAAAAGCTTTTCTT-TCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA-
* * * * * * ** * ** ***
164454 AAAGACAAATACTCAAGAAGCT-TTTCT-TTCCACCATT-TTTTACAAAATCAAAGTTTATTTGT
450 AAAGACAAACAC-GAA-TA-CTCATACTAATCC-CCATTCTTTT-CAGGAT--TAG-GCA-CCAT
* ** ** ** *** * * ** **
164516 TAA-ATAAAACAAACACAATTACTCATACTAATCCCCATT-CT-TTTTAGGATTAGGCACCATTA
506 AAACAT-AGTC-TTCAC-ATTA-GGATAC--A-CGATATTGATGCTTT-GG-TTTCGCA--AGAA
* * * * ** ** * *
164578 A--CATAGTCT-TCA-C-ATTTTGATGCACGATA-T-TGATGCTTCAGTTTCGCAAA-AAAACAT
560 AGGCAT-TTCTCCCACCAATTTT--TGTA--A-AGTCT-AAG-TTC-GTGCCTTAAATGAGACA-
* ** * * * ** * * * ** ** *
164635 ATTTTTCCCACTAAATTTTTGTAAAGCCGAAGTT-TTTGCCTTAAATG-GAAGAAACATCGAT-T
615 A------ACA-TGGATTCTAGT-AA--TGATCTTCATT-CATT--TTGTGATTAGGCA-CGATAA
* * *
164697 CTTATAATGTTCTTCATTCATTTTGCGATTACGCACCATAACAGATTCTCCTCGTTAGGATCAAT
666 C--A-CAT-TT-TTC--TCA-TTAG-GA-TA---A--AT----GA------T-ATT--G----AT
* *** ** * ** *
164762 GATATTCATGATTTTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCA
699 GATTTTC-T--TTTCCATGGA--AATC--TTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCA
* * * * * * * *
164827 TCCCTTAAGTAAGGCGAGCATCGATTCTCATAACAGTCTCTATTCTTTTCGAGGTTGGGAACCAA
757 TCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-A
* * * * *
164892 AAATACCATCACTTCGTTAGGAGACATAATATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTT
821 AAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGA-AAGCTTTTCTT
*** * * * *
164957 CCCATGGTTTTTGATAGAATCAAGGTTTGTCTCTCAAGAAAGACAATCAAGAATACTCATACA
885 CCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGACAA-CATGAATACTCATACT
* ** *
165020 AATCCCTATTCTTCTT-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATCCATAATATA
1 AATCCCTATTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * * * ** *
165084 GATGTTTTGGTTTTGTAAGAAAGGCTTTTATCCAACCAATTTTTATAAAATCTAAGTTCGTGTCT
65 GATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
** * * * *
165149 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCGGTCACTTTGTGGTTA-GTAGCCATAGAC
129 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA-CCATAAAC
* * * *
165213 ACATTCT-TTTCAGTAGGAAAAATGATATTGATGATTTTCATTTGCATGGAAATCTTTTC--TGC
193 ACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * ** *
165275 CCTATTTTCCTTCG-AATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCGGAACAATC
257 CCTATTTTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* * * ** * * * *
165339 TCCATTCTTTT-AAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAGGATACATGATATTGAGG
321 TCCATTCTTTTGAA-GATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATG
* * * * * * *
165403 CTTTGGTGTCACAAGAAAAGCTTTTCTTTCTACCGTTTTTGATAAAATCAAAGTTTATTTCCTAA
385 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA
* ** * * *
165468 ATAAGAC-AA-AC---T--TGC--ACAAAT-CCCATTCTTTTTTGAATTAGGCACCGTAAACAAA
450 A-AAGACAAACACGAATACT-CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
** * **
165523 GTCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTCTTAAGAAAGGC-TTTCTTCCCACCA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTC-TCCCACCA
* * * * * * *
165587 ATTTTAGTGAAGTCTAAGTTCATGCCTTAAAAGAGACAAACATAGATTCTAGAAATGAT-TATCT
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCA
* * * *
165651 TTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATGTTGATGATTTT
641 TTCATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTT
* * * *
165716 CTTTTCCATAGAAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAGTTAATCCC-TCAAATAA
705 CTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCAT-AAATAA
* * * * * *
165780 GACTAGCATCGATTCTCGTAAAAGTTTCAATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCAC
769 GACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCAC
* * * * * *
165845 TTCCTTAGGAGGCATGCCATTGATGCTTTGGTGTCGCAAAAAAAGCTTTTCTTTCCACCGTTTTT
833 TTCATTAGGAGACATGACATTGATGCTTTGGTGTCGC-AAGAAAGCTTTTCTTCCCACCATTTTT
* * * * * *
165910 GATAGAATCAAGGTTTGTCTCTTAAGTAGGACATATATGAATAATCATAAT
897 GATAGAATCAAGGTTTGTCTTTTAAGAAAGACA-ACATGAATACTCATACT
* * * * * *
165961 AATCCCCATTCTTTTCAAGATTAGGCACCATAAGCATAGTCTTCACATTAGGATACATGATATTA
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* ** *
166026 ATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTTTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * * **
166091 AAATGAAAGAAACATGGATTCTTA-TAATGATTTTCTTTCATTTTGTGATTACACACCAT-AACA
130 AAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* * * * *
166154 CATTCACC-TCGTTAGGATAAATGATATTAACGATTTTCTTTTCCATGGAAATCTTTTCTTTGCA
194 CATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * * * *
166218 CTATTTTTCTTAAAATCAAAGTTCATTCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCAC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * *
166283 CATTCTTTTCG-AGATTGCGAACCAAAAACACC-TCCACTTCATTAGGAGACATGATATTGATGC
323 CATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCC-CTTCATTAGGAGACATGACATTGATGC
* * ** * * *
166346 TTTAGTGTCGCAAGAGAAGCTTTT-TTTCCCACGGTTTTTTATAGAATCAAGGTTTGTCTCTCAA
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA
* ** * * * * *
166410 GAAAGATAATTTA-GAATACTCGTACTAATCCCTATTCTTTTTAGGATTACGCACCATAAACCTA
450 -AAAGACAA-ACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
* * * * *
166474 GTCTTCTA-ATTAGGATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTTCCACCA
513 GTCTTC-ACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCA
* * * * *
166538 ATTTTT-TATAGAGCCTTACTTCGTACCTCAAATGAGACAAACATGGATTCTAAACATTGATTCT
577 ATTTTTGTA-A-AGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCT----A--G----T
* * * * *** *
166602 AGTGATGATCTTTATTCATTTTGTGATTAGACACCATAAACACGTTCCCCTCATTAGGAAAAATG
630 A---ATGATCTTCATTCATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATG
** *** * * * *
166667 ATATTGACAATTTTCTTTTGTGTGAAAATCTTTTC--TACCCTATTTTCCTTCAAACCAAAGTTC
691 ATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTC
* * * * * *
166730 ATCGCATAAAAAAGACAAAG-ATCGATTCTTATAACAGTCTCCATTCTTTTGAAGATTGAGAAGC
756 ATCCCATAAATAAGAC-AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAA-C
* * * * * *
166794 TAAAACGCATTCCCTTCATTCA-GATG-CATGACATTGATGCTTTGGTGTCGTAAGAACAACTTT
819 CAAAACACCTTCACTTCATT-AGGA-GACATGACATTGATGCTTTGGTGTCGCAAGAA-AGCTTT
* * * * * * * ** *
166857 TCTTTCTACCATTTTTTTACAGAATCAAAGTTTATCTCTTAA-ATAAGACAAACACAAATACACA
881 TCTTCCCACCA-TTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-AAGAC-AACATGAATACTCA
*
166921 GACT
943 TACT
* * * * **
166925 AATCCCCATTCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * *
166990 ATGCTTTAGTTTTGCTAAAAAATGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCT
66 ATGCTTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
* * *
167055 TAAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACCA-CAAC
129 CAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* * * *
167118 ACATT-TAAC-TCATTAGGATAAATGACATAGATGA-TTT-TTTTCCATGGAAATCATTTCTTTG
193 ACATTCT-CCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTG
* * * * *
167179 CCCCATTTTCCTTGAAATCAAAGTCCATCCCTTAAATAAGACAAGCATCGATTCTCATAATAGAC
256 CCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* *
167244 TCCATTCTTTTTG-AGATTGGGAACCAAAAACACCTTCACTTCATTAGGAGACATGACATTGATG
321 TCCATTC-TTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATG
* ** * *
167308 CTTTGGTGTCGCAAG-AAAGCCTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTATCTTTTA
385 CTTTGGTGTCGCAAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTA
* * ** *
167372 AGAAAGACAAACATGAAAACTCATACTAATCCTTATTCTTTTCAGGATTA-GCACCACAAACATA
449 A-AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
** * * * * * * *
167436 GTCTTCTTATTAGGATCCACGATATGGTTGCTTTTGTTTTGCAAAAAAGGCTTTTAC-CCCACCA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-CTCCCACCA
**
167500 ATTTTTGTAAAGTCTAAGTTCGTGCCCCAAATGAGACAAACATGGATTCTAGTAATGATCTTCAT
577 ATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCAT
* * * *
167565 TCATTTTGTGATTAGGCACTATAA-ACATATTCTCCTCTTTAGGATAAATGATATTGATGATTCT
642 TCATTTTGTGATTAGGCACGATAACACAT-TT-TTCTCATTAGGATAAATGATATTGATGATTTT
* * * * *
167629 -TTTTCCGA-GGAAATCCTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATACCTTAAATAA
705 CTTTTCC-ATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAA
** * *
167692 GACAAATATCGATTCTCATAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCAC
769 GACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCAC
* * * * *
167757 TTCTTTAGGAGACATGACACTGATGCTTTGTTGTCGCAAGAAAAGCTTTTCTTTCCACCGTTTTT
833 TTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTT
* * * *
167822 GATAGAATCAAGGTTTGTCTCTTAAGTAAGACATACATGAATAATCATAAT
897 GATAGAATCAAGGTTTGTCTTTTAAGAAAGACA-ACATGAATACTCATACT
* * *
167873 AATCCCCACTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACACATCACAT
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAG---T--C--T----T---C-T--CAT
* * *
167938 TAGGATACACAATATTGAAGCTTTGGTTCTGCAAGAAAGGCATTTTTCCCACCAATTTTT-TCAA
49 TAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGT-AA
* * * *
168002 AGCCTAAGTTTGTGCCTTC-AAGGACACAAACATGGATTCTTA-TAATCATCTTCATTCATTTTG
112 AGCCTAAGTTCGTGCC-TCAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTG
* * *
168065 TGATTACGACACCAT-AACACATTCTCC-TCGTTAGAATAAATGATATTGATGATTTTCTTTTCC
175 TGATTA-GGCACCATAAACACATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCC
* * *
168128 ATGGAAATCTTTTTTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCTTAAATAGGACAAGCA
238 ATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCA
*
168193 TCGATTCTCATAACAGTCTCCATTCTTTTCG-AGATTGGGAACCAAAAACACC-TCCACTTCATT
303 TCGATTCTCATAACAGTCTCCATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCC-CTTCATT
* * * * * * * *
168256 AGGAGACATGATATCGATGCTTTGGTGCCGCAAGCGAAA-CTTTTCTTCCCTCGATTTTTGATCG
366 AGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAAGCTTTTCTTTCCACCATTTTTGATAG
* * *
168320 AATCAAGGTTTGTCTCTTAAGAAAGACAAACACGAATACTCATACTAATCCCTATTCTTTTTAGG
430 AATCAAGGTTTATCTCTTAA-AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGG
* ** * * **
168385 ATTAGGTACCATAAACATAGTCTTCTTATTAGGATCCATGATATTGATGCTTTGGTTTTACAAGA
494 ATTAGGCACCATAAACATAGTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGA
* * * * *
168450 AAGGCTTTTAT-CCACCCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGATAAACATGGA
559 AAGGCATTTCTCCCA-CCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGA
* ** * *
168514 TTCTAGTAATGATCTTTATTCATTTTGTGATTAGGTGCCATAAACACATTCTTT-TCTTTAGGA-
623 TTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACGAT-AACACATT-TTTCTCATTAGGAT
*
168577 AAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTC--TGCCCTATTTTCCTTCG-AATCA
686 AAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-GAAATCA
* * *
168639 AAGTTCATCCCTTAAATAAGACAAGCATCGATTGTCGTAACAA-TCTCCATTCTTTT-AAGGATT
750 AAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAA-AAGTCTCCATTCTTTTCAA-GATT
* ** ** * * * * *
168702 AGGAAGCCAAAATGCAATCATTTCTTTAGGATACAGGACATTGATACTTTGGTGTCGCAAGAAAA
813 GGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAA
*** * * * * * * *
168767 GCTTTTCTTTTTATCGTTTTTGATAAAATCAAAGTTTAT-TTCCTAAATAAGACAA-ACTAGCAC
876 GCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT--T---TAAGA-AAGAC-AACAT
*
168830 GAAATAAAATCAAAGTTTATTTCCTAAAT
934 G-AAT--ACTC--A---TA----C----T
** * * *
168859 AAGATAAACTTGCACGAATCCCATTCTCTTTC-GGATTAGGCACTGTAAATAAAGTCTTCTTATT
1 -A-AT---C---C-C---T---ATTCT-TTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* * *
168923 AGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAG
50 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAG
* * * *
168988 TCTAAGTTCGTGCCTTAAAAGAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGG
114 CCTAAGTTCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGA
169052 TTAGGCACCATAAACACATTCTCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTTCGCA-
178 TTAGGCACCATAAACACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTC-TTTTC-CAT
*
169115 --AAATTCTTTTCTTTGCCCTA------TT----T-----TTC-T----TAAATAAGACAAGTAT
240 GGAAA-TCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCAT
* * ** ** * * * *
169158 CGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACTAAAAACCCCTTCACTTCCTTAGC
304 CGATTCTCATAACAGTCTCCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGG
* * *
169223 AGACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTTCCATCATTTTTTATAGAATC
369 AGACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATC
* * * * * * * * *
169288 AAGGTTTGTGTCTTAAGTAAGACATACATGAATAATCATAATAATCCCTAGTCTTTTCAAGG-TT
434 AAGGTTTATCTCTTAA-AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTC-AGGATT
* * * * * *
169352 AGGTAGCATAAACATAGTCTTCACATTAGGATAAATGATACTGATGCTTTGGTCTCGCAAGAAAG
497 AGGCACCATAAACATAGTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAG
* * * * * * *
169417 GCATTTTTCCCACCAATGTTTGAAAAG-CTTAAATTTGTGCCTTATATGAGACAAACACGGATTC
562 GCATTTCTCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTTAAATGAGACAAACATGGATTC
* * * * * *
169481 T--TATATTATCTTCATTCATTTTTTGATTATGCACCATAACACATTCTCCTCATTAGGATAAAT
626 TAGTA-ATGATCTTCATTCATTTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAAT
* *
169544 GATATTGATGATTTTCTTTTCCATGGATATCTTTTCTTTGCCCTATTTTCCTTGAAATCGAAGTT
690 GATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTT
* * * ** * ** *
169609 CATCCCTTAAATAATATAAGCATCGATTCTCATAGCAGTCTCTATTCTTTTTGAGATTAGGAACC
755 CATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC
* * * *
169674 AAAAACACCTCCACTTCATTAGGAGACATGATATTGATGCTTTGGGGTCGCAAGCGAAGCTTTTC
820 -AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTC
* ** * * * * *
169739 TTCTCACGGTTTATGATAGAATCAAGGTCTATCTCTTAAGAAAGACAAACAAGAATACTCATACT
883 TTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * * **
169804 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATTGTCATCTCATTAGAATCCTTGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * * *
169869 ATGCTTCGGTTTTGCATGAAAGGCTTTTATCCCACTAATTTTTGTAATGTCC-AAGTTCATGTCT
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG-CCTAAGTTCGTGCCT
** * * *
169933 CAAATGAGACAAACCCGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGGCACCTTAAATA
129 CAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACA
* * * * *
169998 CATTCT-TTTCATTAGAAAAAAAAGA-ATTGATGATTTTCTTTTACATGGAAATCTTTTC--TGC
194 CATTCTCCTTCA-TAG-GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * *
170059 CATATTTTCCTTCG-AATCAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTC
257 CCTATTTTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* ** * ** * *** * *
170123 TCAATTCTTTT-AAGGATTAAGAAGCTGAAACGCAAACCCTTCTTTAGGATACATGACATTGATG
321 TCCATTCTTTTGAA-GATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATG
* * * * * * * *
170187 CTTTGGTGTTGCAAAAAAAGCTTTTCTTTCTACCGTTTTTGATAAAATCAAAGTTTATTTCCTAA
385 CTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA
* * * * * * *
170252 ATATGAC-AA-AC---T--TGCAT--GAAT-CCCATTCTTTCCCGGATTAGGCAACGTAAACAAA
450 A-AAGACAAACACGAATACT-CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
* * * * * * *
170307 GTTTTCTCATTAGGGTGCACGATATTGATGCTTTGGTTTCACAAGAAAAGC-TTTCTTCCTACCA
513 GTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTC-TCCCACCA
* * *
170371 ATTTTAGCAAAGTCTAAGTTCAG-GCCTTCAATGAGACAAACATGGATTCTAGTAATGAT-TATC
577 ATTTTTGTAAAGTCTAAGTTC-GTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TC
** * ** *
170434 ATTCATTTTGTGATTAGGCACTG-TCGCA-ACTTTCTCCTTTTTAGGATAAATGATATTGATGAA
640 ATTCATTTTGTGATTAGGCAC-GATAACACA-TTT-TTCTCATTAGGATAAATGATATTGATGAT
* * * * * * *
170497 TTT-TTTTGCATGAAAATCTTTTATTTGCCCTATTTTTCGTAAAATCAAAGTTCATCCCTTAAAT
702 TTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAAT
* *** * * * * * * *
170561 AAAAGGGGCATCCATTTTCGTAACAGTCTCCATTCTTTTAAAGAATGGGATACTAAAACGGATTC
767 AAGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGA-ACCAAAAC--A---
* * * *
170626 CCTTCCTAAAACGGATTCCCTTCTTTAGGAGACATG-CTGTTGATGCTTTGGTGTTGTAAGAAAA
826 CC-T--T----C--A----CTTCATTAGGAGACATGAC-ATTGATGCTTTGGTGTCGCAAG-AAA
* * * * * * * *
170690 ACTTTTGTTTCTACCATTTTTTATGGAACCAAAGTTTGTC-TTT-A-AAAGACAAACATGAATAC
876 GCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATAC
170752 TCATACT
940 TCATACT
* ** * * ** *
170759 AGTCCCTATTCTTTTTGGGACTAGGTACCATATGCATAGTCTTCTCATTAGGATACACGATATTA
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
*
170824 ATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCC
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAAGCCTAAGTTCGTGCC
* *
170889 TTAAATGAGACAAACATGG-TTCTAGTAATGATCTTCATTCATTTTGGGATTAGGCACCATAAAC
128 TCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* * * *
170953 ACATTC-CCTTTATTAGGA-AAAGTGATATTGATGATTTTCTTTTTCGTGTAAATCTTTTC--TG
193 ACATTCTCCTTCA-TAGGATAAA-TGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTG
* * * * *
171014 CCCTATTTTCCTTCAAAACAAAGTTCATCCCATAAATAAGACAAGGACCTATTC-CTATAACAGT
256 CCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTC-ATAACAGT
* ** * * ** *
171078 CACCATTCTTTTGAAGATTAAGAAGCTAAAATGCATTCCCTTCATTAGGATG-CATGACATTGAT
320 CTCCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGA-GACATGACATTGAT
** * * * * *
171142 GCTTTGGCATCGCAAGAAAAGCTTTTCTTTCCACTATTTTTTACAGAATTAAAGTTTATCTCTTA
384 GCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTA
* * * * *
171207 AATAAGGCAAACACAAATACTCATACTAATCCCCAATCTTTTTAGGATTAGGCACCATTAACATA
449 AA-AAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATA
** * * * * *
171272 GTCTTCACATTTTGAT-CTACGATATTGATGCTTTAGTTTCCCAAAAAAAGGCATTTTTCGCACC
513 GTCTTCACATTAGGATAC-ACGATATTGATGCTTTGGTTTCGC-AAGAAAGGCATTTCTCCCACC
* * * * *
171336 AATTTTTGTCAAGCCTAAGTTTGTGCCCTAAATGAGACAAACATGGATTCTTA-TATTGATCTTC
576 AATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTC
* * * * *
171400 ATTCATTTTGTGATTACGCACCATAACACATTTTCCTCTTTAGGATAAAGGATATTGATGATTTA
640 ATTCATTTTGTGATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTT-
* * * * *
171465 TTTTTTCCATGGAAATCTTTTCTTTGTCCTATTTTCCTTGAAATCAAACTTCATCCCTTAAACAA
704 TCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAA
* * * *
171530 GACAAGTATCGATTCTCATAATAGTCTCCATTCTTTTCGAGAATGGGAACCAAAAACACCTTCAC
769 GACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCAC
* * * ***
171595 TACATTAGAAAACATGACATTGATGCTTTGGTGTCGCAAGAAAGCCTTTTCTTCCCATGGTTTTT
833 TTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTT
* * * * * ** *
171660 AATACAATCAAGGCTTGTCTTCTAAGAAAGAAAAACACAAATACTCATCCT
897 GATAGAATCAAGGTTTGTCTTTTAAGAAAG-ACAACATGAATACTCATACT
* * * *
171711 AATCCCTATTCTTTTCAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATCCATGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* *
171776 ATGCTTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAGTCTAAGTTTGTGCCTC
66 ATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* *
171841 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTTATTTTGTGATTAGGCACCATGAACAC
130 AAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACAC
*
171906 ATTCTCCTT-ATTAGGATAAATGATATTGATGATTTTC--TTCTATGGAAATCTTTTCTTTGCCC
195 ATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCC
* *
171968 TATTTTCCTTGAAATCAAAGTTCAT-CCTTCAAATAAGACAAGCATCGATTCTCATAATAGTCTC
259 TATTTTCCTTGAAATCAAAGTTCATCCCAT-AAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * * ** * *
172032 CATTTTTTTCG-ATATTGGGAACCAAAAACACCTTCTTTTGATTAGGAAACATGACATTGATGCT
323 CATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGCT
* ** * * *
172096 TTGGTGTCGCAAG-AAAGCTTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTGTCTTTTAAG
387 TTGGTGTCGCAAGAAAAGC-TTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA-
* *
172160 AAAGACAAACACGAATACTCATACTAAACCCTATTCTTTTCAGGATTAGGCACCATAAACATAGT
450 AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
** * * * *
172225 CTTCTTATTAGGATACACGATATTGATGCTTTGATTTAGCAATAAAGG-ATTTCTTCCCACTAAT
515 CTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTC-TCCCACCAAT
* * * **
172289 TTTAGTAAAGTCTAAGTTCATGCTTTAAAAAAGACAAACATGGATTCTAGTAATGAT-TATCATT
579 TTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATT
** * * *
172353 CATTTTGTGATTAGGCACCTTAAACACATTCTCCTCATTAGGATAAATGATATTGATAATTTT-T
643 CATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCT
* * * * *
172417 TTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCGAAGCTAATCCCTTAAATAAGAC
707 TTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGAC
* * * * * *
172482 AGGCATCAATTCTCTTAAATGTCTCCATTATTTCCAAGATTGGGAACCAAAA-ACCCTTCACTTC
772 AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAACA-CCTTCACTTC
* * * * * *
172546 CTTAGGAGACATGACGTTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTACCGTTTTTAAT
836 ATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGAT
* * * * * *
172611 AAAATCAAGGTCTAT-TTCCTAA-ATAAGACAA-ACT---T--GC--ACG
900 AGAATCAAGGTTTGTCTT-TTAAGA-AAGACAACA-TGAATACTCATACT
* * * * *
172651 AAT-CTTATTCGTTTTC-GGATTAGGCACCGTAAACAAAGTCTTCTCATTTGGATACATGATATT
1 AATCCCTATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* * ** *
172714 GATGCTTTTGGTTTTGCAACAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTTTAAGTTCGTCCC
65 GATGC-TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCC
* * * * *
172779 TTAAATGAGACAAAAATAGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAAT
128 TCAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAA
* * ** * * *
172843 CACTTTCTCTTTTTTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGC
192 CACATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * * * *** * * * *
172908 CTTATTTTCCTTAAAATCAAAGTTCATCCCCTAAATAAAAGGGGCATCTATTCTCGTAATAATCT
257 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * ** * * * * * *
172973 CCATTCTTTTAAAGAATGGGATGCTAACACGCATTCCCTTCTTTAGGAGACATG-CTGTTGATGC
322 CCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGAC-ATTGATGC
* * * * * * * *
173037 TTTGGTGTTGTAAGAAAAACTTTTGTTTCTACCATTTTT-AGTAGAACCAAAGTTTGTCTC-T-A
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGA-TAGAATCAAGGTTTATCTCTTAA
* ** * **
173099 AAAGAAAAACTTGAATACTCATACTAATCCCCATTCTCTTTC-GGATTAGGTACCATATGCATAG
450 AAAGACAAACACGAATACTCATACTAATCCCCATTCT-TTTCAGGATTAGGCACCATAAACATAG
* * * * * *
173163 TCTTCTCATTAGGATACACAATGTTAATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAAT
514 TCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAA-
* * * *
173228 TTTTTTGTAAAGCCTAACTTCGTGCCTCAAATTAGACAAACATGGATTCTAAACAAGGATTCTAG
578 -TTTTTGTAAAGTCTAAGTTCGTGCCTTAAA-T-G------A--GA--C-AAACATGGATTCTAG
* * *
173293 TAATGATCTTTATTCATTTTGTGATTAGGCACCATAAACACATTCCCTT-T-ATTAGGA-AAAGT
629 TAATGATCTTCATTCATTTTGTGATTAGGCACGAT-AACACATT--TTTCTCATTAGGATAAA-T
*** * * * * *
173355 GATATTGATGATTTTCTTTTGTGTGAAAATCATTTC--TGCCCTATTTTCCTTCAAACCGAAGTT
690 GATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTT
* * * * * **
173418 CATCCCATAAATAAGGCAAGGATCGAATC-CTATAACAGT-TGCCATTCTTTTGAAGATTAAGAA
755 CATCCCATAAATAAGACAAGCATCGATTCTC-ATAAAAGTCT-CCATTCTTTTCAAGATTGGGAA
* * * * * *
173481 GCTAAAACGCATTCCCTTCGTTAGGATG-CATGACATTGATGCTTTAGG-GTTGCAAGAAAAGCT
818 -CCAAAACACCTTCACTTCATTAGGA-GACATGACATTGATGCTTT-GGTGTCGCAAG-AAAGCT
* * * * * * **
173544 TTTCTTTCCACCATTTTTTACAGAATCAAAGTTTATCTCTTAA-ATAAGACAAACACAAATACTC
879 TTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-AAGAC-AACATGAATACTC
173608 ATACT
942 ATACT
* * * * *** *
173613 AATCCCCATTCTTTTTAGGATTAGGCACCATCAACATAGTCTTCACATTTTAATACACGACATT-
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* ** * * ** * **
173677 AAGCTTTTAATTTCGCAAAAAAAAACATTTTTCACACCAATTTTTGTAAAGCCTAAGTTTATGCC
66 ATGC-TTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCC
* **
173742 TCAAATGAGGCAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACCAT-AA
128 TCAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA
* * * *
173805 CACATTTTTC-TCATCGGGATAAAAGATATTGATGATTTT-TTTTCCATGGAAATCTTTTCTTTG
192 CACATTCTCCTTCAT-AGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTG
* * * * * * *
173868 CTCTATTTTCCTTGAAATCAAAGTTCATCCAACAAACAAGACAAGCATCGATTCTTATAATAGCC
256 CCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* * *
173933 TCCATTCTTTTCG-AGATTGGGAACCAAAAACACCTTCACTTCATTTGGAGACATGACATTGATG
321 TCCATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATG
* * ** * * *
173997 CTTTGGTGTCGAAAG-AAAGCCTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTGTCTTTTG
385 CTTTGGTGTCGCAAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTT-
* * * *
174061 AGAAAGACAAACACGAATACTCATACTAA-CCCCTATTCCTTTCAGGATTAGGCAGCATAAACGT
448 AAAAAGACAAACACGAATACTCATACTAATCCCC-ATTCTTTTCAGGATTAGGCACCATAAACAT
** * * * ** * * *
174125 AGTCTTCTTATTAGGATCCATGATATTGATGCTTTGGATTT-TCAAGAACACTCATAGTAT-TC-
512 AGTCTTCACATTAGGATACACGATATTGATGCTTTGG-TTTCGCAAGAA-AGGCAT-TTCTCCCA
* * * * * * * * * *** * *
174187 TCTATACTTT-TCAGGAT-T-AG-AC--ACCATAAACAT-AGTCTTCTCTTTAGGA-TCCATGAT
574 CCAAT-TTTTGTAAAG-TCTAAGTTCGTGCC-TTAA-ATGAGAC-AAAC-AT-GGATTCTA-G-T
* ** ** *** ** * * * *
174244 ATTGATGC-T--TTGGTTTTGTGAGAAAGGCTTTTATCCCATCAATTTTTGTAAAGTCTAAG-TT
630 AATGAT-CTTCATTCATTTTGTGA-TTAGGC-ACGATAACA-C-ATTTTTCT-CA-T-TAGGATA
** * * **** * * * ** *** ****
174305 CGTGTCTCAAATGA-GACAAACGTGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCAC
687 AATG-AT--ATTGATGATTTTC-T--TTTCCA-TGGAAATCTT--TTC--TTTG-CCCTATTTTC
* * * ** * * *
174369 CAT-AAA-CACA-TTCTTTTCATTAGAAAAAATGATATTG-AT-GATTTTCTTTTGCATGGAAAT
740 CTTGAAATCAAAGTTCATCCCA-T--AAATAA-GACA-AGCATCGA--TTC---T-CAT--AAA-
** * * * * * * * * *
174429 CTTTTCTTCCCTT-TTTTC---CTT-CGAATCAAAGTTCATCCCTT-AATTAAGATAAGCATCGA
791 --AGTC-TCCATTCTTTTCAAGATTGGGAACCAAA--ACA--CCTTCACTT--CATTAGGA--GA
* * * *
174488 TTC-TCGTAACAGTCTCCATTCTTTTAAGGAT-TAGGAAGCAAAAACGCTATCCCTTCTTTAGGA
845 --CAT-G--ACA-T-T-GATGC-TTT--GG-TGTCGCAAG---AAA-GCT-T---TTC--T----
* ** * * ** * * *
174551 TACATGACATTGATGCTTTTGTGTCACAAGAAAAGCTTT-TCTTTCTACCGTTTTTAATAAAATC
884 T-C---CCA-CCAT--TTTTG-AT-AGAA-TCAAGGTTTGTCTTT-TA-AG------A-AAGA-C
* * * * *
174615 AA-AGTTTATTTCCTAAATAAGACA
929 AACA--TGA-ATACT-CAT---ACT
* * *
174639 AACTTGCATGAATCCTATTCTTTTCCGGATTAGGCACCGTAAACAAAGTCTTCTCATTAGGATAC
1 AA--T-C------CCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAC
* * ** * *
174704 ATGGTATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAGT
57 ACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGCCTAAGT
* * * * *
174769 TCGTGCCTTAAATAAGACAAACATGGATTCTAGTAATGAAT-ATCATTTATTTTGTGATTAGCCA
121 TCGTGCCTCAAATGAGACAAACATGGATTCTAGTAATG-ATCTTCATTCATTTTGTGATTAGGCA
* * * * ** * * * *
174833 CCGTAACCACTTTCTCTTTTTTAGGATAAATGATATTGATCATTTTCTTTTGCATGAAAATCATT
185 CCATAAACACATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTT
* * * * * * * * *
174898 TATTTGCCCTATTTTCCCTAAAATCAAAGTCCATCTCTTAAATAA-A-AGGGACATCCATTCTCG
250 TCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACA-AG-CATCGATTCTCA
* * * * ** * ** * * * * **
174961 TAACAGCCTCTATTCTTTTAAAGAATGGGATGCTAAAATGCATTCCTTTCTTTAGGAGAGATGTT
313 TAACAGTCTCCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGAC
* * * * * * * * * * *
175026 GTTGATGCTTTGGTGTTGTAAGAAAAACTTTTGTTTCTACCATTTTTTAAAGAACCAAAGTTTGT
378 ATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTAT
* * ** * * * *
175091 CTC-TAAAATG-CAAACATGAATACTCATACTAATCCCCATT-TTTTTTGGATGAGGTAACATAT
443 CTCTTAAAAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAA
* * * *
175153 GCATAGTCTTCTCATTAGGATACACGATATTGATGCTTTGGTATT-ACAAGAAAGGCATTTTTCC
508 ACATAGTCTTCACATTAGGATACACGATATTGATGCTTTGGT-TTCGCAAGAAAGGCATTTCTCC
* * * *
175217 CACCAATTTTTTTGTAAAGCCTAACTTCGTGCCTCAAATGAGACCAACATGGATTCCAAACATGG
572 CACCAA--TTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGG---------AT--
* *** *
175282 ATCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCCCCTCATTAGGAAA
624 -TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATA
* * * * *
175347 AATGATGTTGATGATTTTCTTTTGCGTGGAAATCTTTTC--TGCCCTATTTTCCTTCAAACCAAA
687 AATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAA
* * * *
175410 GTTCATCCCTTAAATAAGACAAAG-ATCGATTCTTATAACAGTCTCCATTCTTTT-AATGATTGA
752 GTTCATCCCATAAATAAGAC-AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAA-GATTGG
* * * * * *
175473 GAAGCTAAAACGCGTTTC-CTTTATTAGGATG-CATGACATTGATGCTTTGGTGTCACAACAAAA
815 GAA-CCAAAACAC-CTTCACTTCATTAGGA-GACATGACATTGATGCTTTGGTGTCGCAA-GAAA
* * * * * * * * **
175536 GCTTTTCTTTCCACCATTTTTTACAAAATGAAAGTTTATCTCTTAA-ATAAGACAAACACAAATA
876 GCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-AAGAC-AACATGAATA
175600 CTCATACT
939 CTCATACT
* * * * ** *
175608 AATCCCCATTCTTTTTAGGATTAGCCACCATAAACATAGTCTTCACATTTTGATACACAATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * * *
175673 ATGCTTTAGTATTCCAAAAAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCT
66 ATGCTTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
** * * *
175738 TGAATGAGACAAACATGGATTCT--TATATGATCTCCATTTATTTTGTGATTATGCACCAT-AAC
129 CAAATGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* **
175800 ACATTTTCCTTTTTAGGATAAATGATATTGATGA-TTTCTTTTCCATGGAAATCTTTTCTTTGCC
193 ACATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * * * * *
175864 CTATTTTCCTTGAAATCGAAGTTCATCCCTTAAACAAGACAAGCATCAATCCTCATGACAGTCTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* ** * *
175929 CATTCTTTTTG-AGATTGGGAA-CCAGAAATACCTTCATTTCGTTAGGAGACATGATATTGATGC
323 CATTC-TTTTGAAGATTGGGAACCCA-AAACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* *** * *
175992 TTTGGTGTCGCAAGAAAAGCTTTTCTTCCCATGGTTTTTGATAGAATCAGGGTTTGTCTCTTAAG
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA-
* * * *
176057 AAAGACAATCAAGGATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGT
450 AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * * * * *
176122 CTTCTCATTATGATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTGTCCCACCAATT
515 CTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATT
* * * *
176187 TTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGAAAAACATGGATTCTAGTAATGATCTTCAGTCA
580 TTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* * * * * *
176252 TTTTAG-GATTAGGCACCATAA-ACATATTCTTTTCAATAGGAAAAATTATATTGAGGATTTTCT
645 TTTT-GTGATTAGGCACGATAACACAT-TT-TTCTCATTAGGATAAATGATATTGATGATTTTCT
* * * * *
176315 TTTGCATGGAAA---TTT-TTTGTCCTATTTTTCTTCG-AATCAAATTTCATCCCTTAAATAAGA
707 TTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-GAAATCAAAGTTCATCCCATAAATAAGA
* * * * * * ** *
176375 CAGGCATCGATTCTCATAATAGTCCCCATT-TTTTTAAGGATTAGGAAGCCAAAACGCAATCCCT
771 CAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAACACCTTCACT
* * * * * * * * *
176439 TCTTTAGGATAGATGACATTGATGCTTTGGTGTCGCAAAAAAAGGTTTTCTTTCTACCGTGTTTG
834 TCATTAGGAGACATGACATTGATGCTTTGGTGTCGC-AAGAAAGCTTTTCTTCCCACCATTTTTG
* * * * *
176504 ATAAAATCAAAGTTTGT-TTCCTAA-ATAAGACAA-ACT---T--GCAT--G
898 ATAGAATCAAGGTTTGTCTT-TTAAGA-AAGACAACA-TGAATACTCATACT
* * * * *
176546 AAT-CCTATTCTTTTCTGGATTAGGCATCATAAACAAAGTCTTCTCATTAAGATACATGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * *
176610 ATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAG-TCTGTGCCT
66 ATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGCCTAAGTTC-GTGCCT
* * * * *
176674 TAAATGAGACAAATATGGATTCTAGTACT-AT-TATCATTCATTTTGTGATTAGGCACCGTAACC
129 CAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAAC
* ** * * * * * * *
176737 ACTTTCTCCTTTTTAGGATAAATGATACTGATCATTTTCTTTTGCACGAAAATATTTTATTTGCC
193 ACATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCC
* * * * *** *
176802 CTATTTTCCTTAAAATCAAAGTTCATCTCTTAAATAAAAGGGGCATCCATTCTCATAACAGTCTC
258 CTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTC
* * ** * * * * *
176867 CATTCTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTAGGAGGCATG-CTATTGATGCT
323 CATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGAC-ATTGATGCT
* * * * * * * * *
176931 TTGGTGTCGTAAGAAAAACTTTTGTTTCTACCATTTTTTATAGAACCAAAGTTTGTC-CCT-AAA
387 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAAA
* * * ** * **
176994 CGGCAAACATGAATACTCATACTAATCCCCATTCTTTTTTGGATTAGGTACCATATGCATAGTCT
452 AGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCT
* * * * * * * * *
177059 TCTCATTAGGATACACAAAATTGATGCTCTAGTTTTGCAAGAAAGACATTTTTCCCACCATTTTT
517 TCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCA-ATTT
* *
177124 TTGTAAAGCCTAACTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
581 TTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCAT
* * * *** * *
177189 TTTCTGATTAGGCACCATAAACACACTCCCCTCATTAGGAAAAATGAAATTGATGATTTTCTTTT
646 TTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTT
* * * * *
177254 GCGTGAAAATCTTTTC--TGCCCTATTTTCCTTCAAA-CTAAAGTTCATCCCTTAAATAAGACAA
710 CCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAAATC-AAAGTTCATCCCATAAATAAGACAA
* * * * * * ** * *
177316 GGATCGATTCTTATAACAGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAATGCATTCCCTTCAT
774 GCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCAT
* * * *
177381 TAGGATG-CGT-ACATT-ATTGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTAC
838 TAGGA-GACATGACATTGA-TGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGAT
* * * * **
177443 AGAATCAATGTTTATCTCTTAA-ATAAGATAAACACAAATACTCATACT
900 AGAATCAAGGTTTGTCTTTTAAGA-AAGA-CAACATGAATACTCATACT
* * * * * **
177491 AATCCCCATTCTTTTTAGGATCAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
* * * * * *
177556 ATGCTTTAGTTTGGCAAAAAGAGGGATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTCCCT
66 ATGCTTTGGTTTTGCAAGAA-A-GGCTTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCC-
* * *
177621 TTAAA-GAGACAATCATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTATGCACCAT-AA
128 TCAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA
* * * * * *
177683 TACATTTTCC-TCATTAGGATAAATGATACTGATGA--TT-TTTTCCATAGAAATTTTTTTTTTG
192 CACATTCTCCTTCA-TAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTG
** * * * * *
177744 CCCTATTTTCCTTGAAATTGAAGTTCATCCCTTAAACAAGACAAGCATCGATTCTTATTATAGTC
256 CCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTC
* * *
177809 TCCATTCTTTTCG-AGATTGGGATCCAAAAACACCTTCACC-TCATTAGGAGACTTGACATTGAT
321 TCCATTCTTTT-GAAGATTGGGAACCCAAAACACCTTC-CCTTCATTAGGAGACATGACATTGAT
* ** * * *
177872 GCTTTGGTGTCGCAAG-AAAGCCTTTTCTTCCCACGGTTTTTGATACATTCAAGGTTTGTCTCTT
384 GCTTTGGTGTCGCAAGAAAAG-CTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTT
* * * * * *
177936 AAGAACGACAAACAAGAATACTGC-TACAAATCCCTATTCTTTTCAAGATTAGGCACCACAAACA
448 AA-AAAGACAAACACGAATACT-CATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACA
** * ** * * *
178000 TAGTCTTCTTATTAGGATACATGATATTGACACTTTGGTTTTGCAAGAAAGGCTTTTATCCCACC
511 TAGTCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACC
* * * * *
178065 AATTTTTGTAAAGTCTAAGTTCATGCCTCAAATGAGACAAACATGGGTTTTAGTAATGATCTACA
576 AATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCA
* * * * * *
178130 CTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAAGATAAATGATATTTATGATTTT
641 TTCATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGATATTGATGATTTT
* * * * *
178195 CTTTTCCATGAAAATCTTTTCTTTGCCCTATCTTCCTT-AACCTCAAAGTTAATCTCC-TAAACA
705 CTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTGAA-ATCAAAGTTCATC-CCATAAATA
* * * * *
178258 AGACAAGCATCGATTCTCGTAAAAGTCTCTATTC-CTTCTAGATTGGGAACCAAAAACCCCTTCA
768 AGACAAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCA
* * * * *
178322 CTTCCTTAGGAGACATGACATTGATGCTTTGGTGTGGCAAGAAAAGCTTTTCTTTCCGCCGTTTT
832 CTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTT
* * * * * *
178387 TGATAGAATCAAGGTTTGCCTCTTAAGTAAGACGTACATGAATAATCATAAT
896 TGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-AACATGAATACTCATACT
* * * * *
178439 AAT-CTTCATTCTTTTTAAGATTAGGCACCATAAAC--AGTCTTCACATTAGGATACACGGTATT
1 AATCCCT-ATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATT
* *
178501 GATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCT
65 GATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCT
** * *
178566 TGAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTTATTTTGTGATTACGCACCAT-AAC
129 CAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAAC
* *
178629 ACATTCTCC-TCAATAGGATAAATGATATTCATAATTTTCTTTTCCATGGAAATCTTTTCTTTGC
193 ACATTCTCCTTC-ATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
** * * * * *
178693 TTTATTTTCCTTGAAATTAAAGTTCATCCCTTAAATAAGACAAACATCGATTCTCATAATAGACT
257 CCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT
* * * * * * *
178758 CCATTCTTTTCG-AGATTGGGAACCAAAAAAACATTCACTTTATTAGGAAACATGATATTGATGC
322 CCATTCTTTT-GAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGC
* * * * *
178822 TTTGGTGTCGTAAGAGAAGCTTTTCTTCCCACGATTTTTGATAGAATCAAGGTTTGTCTCTTAAG
386 TTTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAA-
* * * * *
178887 AAAGACAAACAAGAATACTCCTACAAATCCCTATTCTTTTCAAGATTAGGCACCATAAACATAGT
450 AAAGACAAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGT
* * * * ** *
178952 CTTCTCATTAGGATCCAAGATATTGATGCTTTGGTTTTGCAAGAAAGGTTTTTAT-CCACCAATT
515 CTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATT
* * * * * *
179016 TTTGTAAAGTATAAGTTCATGTCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTCG
580 TTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCA
* * *
179081 TTTTGTGATTAGGCACCATAAACACATTCTTT-TCATTAGGAAAAATGATATTAATGATTTTCTT
645 TTTTGTGATTAGGCACGAT-AACACATT-TTTCTCATTAGGATAAATGATATTGATGATTTTCTT
* * * * * *
179145 TTGCGTGGAAATCTTTTC--TGCTCTGTTTTCCTTCG-AATCAAAGTTTATCCCTTAAATAAGAC
708 TTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTT-GAAATCAAAGTTCATCCCATAAATAAGAC
* * * * * ** *
179207 AAGCATCGATTCTCATAACAGTCTCTATTCTTCT-AAGGATTAGGAAGCCAAAACGCAATCCCTT
772 AAGCATCGATTCTCATAAAAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTT
* * * * * **
179271 CTTTAAGATACATGACATTGATGCTTTGGTGTCGCAAGAAAAGCTTTTCTTTCTACTGTTTTTGA
835 CATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGA
* * * * * * * *
179336 TAAAATCAATGTTTAT-TTCCTAAAAAAGGCAA-ACT---T--GCAT--G
899 TAGAATCAAGGTTTGTCTT-TTAAGAAAGACAACA-TGAATACTCATACT
* * * ** *
179377 AATCCC-ATTTTTTTC-GAATTAGGCACCATAAACAAAGTCTTCTTTTTAGGATACACAATATTG
1 AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
** * ** *
179440 ATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTAGTAAAATCTAAGTTCGTGCCTT
66 ATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTC
* * * * *
179505 AAATGAGGCAAACATGGATTGTAGTAATGAT-TATCTTTCATTTTGTGACTAGGCACCATAACCA
130 AAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACA
* ** * * * *
179569 CTTTCTCCTTTTTAAGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGCCC
194 CATTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCC
* * *
179634 TATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAA-A-AAGGGCATCCATTCTCATAACAGTCT
259 TATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAA--GCATCGATTCTCATAACAGTCT
* * * ** * ** * * * * ***
179697 CCAATCTTTTAAAGAATGGGATGCTAAAATGCATTCCTTTCTTTAGGAGACACGTTGTTGATGCT
322 CCATTCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGCT
* * * * * * * * * *
179762 TTGGTGTCGTAAGAAAAACTTTTGTTTCTACCATTTTTTATAAAACCAAAGTTTGTCTC-CAAAA
387 TTGGTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAAA
* * * * * * **
179826 TAGGACAAATATGAATACTCATAC-AATCTCTATTCTTTTTC-GGATTATGTACCATATGCATAG
452 -A-GACAAACACGAATACTCATACTAATCCCCATTC-TTTTCAGGATTAGGCACCATAAACATAG
** * * ** *
179889 TCTTCTTATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAACACATTTTTCCCACCAAT
514 TCTTCACATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAA-
** * * *
179954 TTTTTTGTAAACCCTAACTTCGTGCCTCAAACGAGACAAACACGGATTCTAAACATGGATTCTAG
578 -TTTTTGTAAAGTCTAAGTTCGTGCCTTAAA--TG------A--GA--C-AAACATGGATTCTAG
* * *** * *
180019 TAATGAACTTCATTCATTTTGTGATTAGGCACCATAAACACATTCCCCTCATTAGGAAAAATTAT
629 TAATGATCTTCATTCATTTTGTGATTAGGCACGAT-AACACATTTTTCTCATTAGGATAAATGAT
* * *
180084 ATTGATGACTTTCTTTTGCGTGGAAATCTTTTCTTT
693 ATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTT
180120 TGAAGATTGA
Statistics
Matches: 25577, Mismatches: 4352, Indels: 2974
0.78 0.13 0.09
Matches are distributed among these distances:
928 8 0.00
929 9 0.00
930 180 0.01
931 11 0.00
933 1 0.00
934 2 0.00
935 111 0.00
936 237 0.01
937 647 0.03
938 679 0.03
939 890 0.03
940 1794 0.07
941 628 0.02
942 342 0.01
943 26 0.00
944 202 0.01
945 540 0.02
946 1491 0.06
947 1045 0.04
948 5672 0.22
949 2479 0.10
950 718 0.03
951 476 0.02
952 165 0.01
953 84 0.00
954 279 0.01
955 143 0.01
956 280 0.01
957 46 0.00
958 239 0.01
959 63 0.00
960 142 0.01
961 314 0.01
962 252 0.01
963 562 0.02
964 590 0.02
965 538 0.02
966 278 0.01
967 370 0.01
968 173 0.01
969 14 0.00
970 18 0.00
971 16 0.00
972 17 0.00
973 25 0.00
974 8 0.00
975 25 0.00
976 9 0.00
977 16 0.00
978 20 0.00
979 8 0.00
980 11 0.00
981 6 0.00
982 3 0.00
983 35 0.00
984 179 0.01
985 17 0.00
986 17 0.00
987 7 0.00
988 13 0.00
989 7 0.00
990 12 0.00
991 31 0.00
992 23 0.00
993 17 0.00
994 29 0.00
995 21 0.00
996 21 0.00
997 18 0.00
998 23 0.00
999 8 0.00
1000 15 0.00
1001 42 0.00
1002 26 0.00
1003 130 0.01
1004 400 0.02
1005 73 0.00
1006 9 0.00
1007 8 0.00
1008 14 0.00
1009 20 0.00
1010 13 0.00
1011 21 0.00
1012 21 0.00
1013 19 0.00
1014 39 0.00
1015 24 0.00
1016 23 0.00
1017 17 0.00
1018 26 0.00
1019 13 0.00
1020 20 0.00
1021 14 0.00
1022 11 0.00
1023 13 0.00
1024 8 0.00
1025 6 0.00
1026 8 0.00
1027 4 0.00
1028 6 0.00
1029 19 0.00
1030 7 0.00
1031 12 0.00
1032 76 0.00
1033 39 0.00
1034 110 0.00
1035 94 0.00
1036 172 0.01
1037 19 0.00
1038 11 0.00
1039 5 0.00
1040 7 0.00
1041 10 0.00
1042 9 0.00
1043 13 0.00
1044 7 0.00
1045 10 0.00
1046 12 0.00
1047 13 0.00
1048 1 0.00
1049 4 0.00
1050 1 0.00
1051 7 0.00
1052 11 0.00
1053 3 0.00
1054 5 0.00
1055 5 0.00
1056 9 0.00
1057 10 0.00
1058 19 0.00
1059 20 0.00
1060 14 0.00
1061 29 0.00
1062 16 0.00
1063 17 0.00
1064 18 0.00
1065 28 0.00
1066 25 0.00
1067 24 0.00
1068 12 0.00
1069 1 0.00
1070 2 0.00
1072 4 0.00
1073 9 0.00
1074 7 0.00
1075 4 0.00
1076 2 0.00
1077 8 0.00
1078 10 0.00
1079 8 0.00
1080 9 0.00
1081 15 0.00
1082 17 0.00
1083 19 0.00
1084 5 0.00
1085 1 0.00
1086 6 0.00
1087 8 0.00
1088 12 0.00
1089 9 0.00
1090 5 0.00
1091 2 0.00
1092 1 0.00
1093 2 0.00
1094 3 0.00
1095 3 0.00
1096 6 0.00
1097 6 0.00
1098 9 0.00
1099 14 0.00
1100 5 0.00
1101 9 0.00
1102 9 0.00
1103 1 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (946 bp):
AATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTG
ATGCTTTGGTTTTGCAAGAAAGGCTTTTTCCCACCAATTTTTGTAAAGCCTAAGTTCGTGCCTCA
AATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACA
TTCTCCTTCATAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
TCTTTTGAAGATTGGGAACCCAAAACACCTTCCCTTCATTAGGAGACATGACATTGATGCTTTGG
TGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGATAGAATCAAGGTTTATCTCTTAAAAAGAC
AAACACGAATACTCATACTAATCCCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCAC
ATTAGGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTTCTCCCACCAATTTTTGTA
AAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGT
GATTAGGCACGATAACACATTTTTCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGG
AAATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGA
TTCTCATAAAAGTCTCCATTCTTTTCAAGATTGGGAACCAAAACACCTTCACTTCATTAGGAGAC
ATGACATTGATGCTTTGGTGTCGCAAGAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGT
TTGTCTTTTAAGAAAGACAACATGAATACTCATACT
Found at i:150185 original size:159 final size:156
Alignment explanation
Indices: 149056--159666 Score: 1537
Period size: 159 Copynumber: 67.3 Consensus size: 156
149046 GCATTCCCTT
* * *
149056 CATTAGGATGCATGACATTGATGCTTTGGTGTT-GCAAGAAAAGCTTTTCTTTCCACCATTTTT-
1 CATTAAGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG
* ** * * ** * *
149119 TACAAAATCAAATTTTATCTCTTAAATAAGACAAACACAAATACTCATACCT-ATCCCCATTCTT
65 T--AGAATCAAGGTTT-TCCCTTAAAGAAGAC-AACATGAATACTCATA-ATAATCTCCATTCTT
* * * *
149183 TTTAGGATCAGGCACCATTAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
** * * * * * *
149215 CATTTTGATACACGATATTAATGCTTTAGTTTCGCAAAAAAAGGCATTGC--TCACACCAATTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAA-GCTTTTCTTTC-CACC-ATTTT
* * * * ** * * * *
149278 TG-AAAAGCCTAA-GTTTGTGCCTCAAATG-AGACAAACATGGGTTCTTATAATGATCTTCATTC
63 TGTAGAA-TC-AAGGTTT-TCCCTTAAA-GAAGAC-AACATGAATACTCATAATAATCTCCATTC
** * * * *
149340 ATTTT-GTGATTACGCACGATAACACAT--TTTTCT
123 -TTTTCAAGATTAGGCACCATAA-ACATAGTCTTCA
* * * * * * * * *
149373 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTTC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * ** * * * *
149435 TTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCG-ATTCTCATAAGAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* * * *
149499 TCGAGATTGGGAACCA-AACACACCT-TTACTT--
126 TCAAGATTAGGCACCATAA-ACA--TAGT-CTTCA
* * * * * * * ***
149530 CATTAGGAGACAAGACATTGATGCTTCGGTGTC-CTAAG-AAAGCCTTTTCTTCCCAAGGTTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGC-AAGAAAAG-CTTTTCTTTCCACCATTTTT
* ** * * *
149593 GGTAGAATCAAGGTTTGT-CTTTTGAGAAAGACGAACACGAATACTCATACTAATC-CATATTCT
64 -GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATCTC-CATTCT
* * *
149656 TTTCAGGATTAGGCACCATAAACATAGTCTACT
124 TTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * *
149689 TATT-AGCATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTAC--CCCACCAATTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTTTCCACC-ATTTT
* * * * * * * *
149751 TGTA-AAGTCTAA-GTTCATGCCTCAAATG-AGACAAACGTGGATTCT-AGTAATGATCTTCATT
63 TGTAGAA-TC-AAGGTT-TTCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATT
** * *
149812 CATTTT-GTGATTAGGCACCATAAACACATTC-TC-
122 C-TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * ** * * *
149845 C-TTGATAGGATAAATGATATTGATGATTTTCTTTTC-CACGAAAATCTTTTCTTTGCC-CTATT
1 CATT-A-A-GATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATT
* * * * * *
149907 TTCCT-TAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCG-ATTCTCATAA-AAGTCTCCA
61 TT--TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCA
* * * ***
149969 TTCTTTCCAAGATTGGGAACCA-AAA-A-CCCCTTCA
120 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
150003 CTTTCTTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTT
1 C---ATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
150068 TGATAGAATCAAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAATCCCCATTCTT
63 TG-TAGAATCAAGGTTTTCC-CTTAAAGAAGACA-ACATGAATACTCATAATAATCTCCATTCTT
150133 TTCAAGATTAGGCACCATAAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * *
150165 CATTAAGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCATTTTTTG
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTG
* * * ** * * * * *
150229 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTACAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** * * * * *
150292 TT-GTGATTATGCTA-GAT-AACACT-TTTTTCT
125 TTCAAGATTAGGC-ACCATAAACA-TAGTCTTCA
* * * * * * * * **
150322 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * *
150384 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTG-ATTCTCATAATAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CA-TGAATACTCATAATAATCTCCATTCTTT
* * * * *
150448 TCGAGATTGGGAACC--AAACACA-CCTTCACA
126 TCAAGATTAGGCACCATAAACATAGTCTT--CA
* * * * * * * ***
150478 TCATTAGGAGACAAGACATTGATG-TTCGGTGTC-CTAAG-AAAGCCTTTTCTTCCCAAGGTTTT
1 -CATTAAGATACATGATATTGATGCTTTGGTTTCGC-AAGAAAAG-CTTTTCTTTCCACCATTTT
* * * * *
150540 TGGTAGAATCAAGGTTTGT-CTTTTAAGAAAGACGAACACGAATACTCATACTAATC-CATATTC
63 T-GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATCTC-CATTC
* * *
150603 TTTTCAGGATTAGGCACCATAAACATAGTCTACT
123 TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * ***
150637 TATT-AGCATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-AGCCCACCAATTTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTT
* * * * * * * *
150700 GTA-AAGTCTAA-GTTCATGCCTCAAATG-AGACAAACGTGGATTCT-AGTAATGATCTTCATTC
64 GTAGAA-TC-AAGGTT-TTCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATTC
** * * * *
150761 ATTTT-GTGATTAGGCACCATAAACACATTCTCCT
123 -TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
** * * * ** * * * * *
150795 TGTTAGGATAAATGATATTGATGATTTTCTTTTC-CACGGAAATCATTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * * * *
150858 CT-TAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCG-ATTCTCATAA-AAGTCTCCATTC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * ***
150920 TTTCCAAGATTGGGAACCA-AAA-A-CCCCTTCA
123 TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
150951 CTTTCTTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTT
1 C---ATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
151016 TGATAGAATCAAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAATCCCCATTCTT
63 TG-TAGAATCAAGGTTTTCC-CTTAAAGAAGACA-ACATGAATACTCATAATAATCTCCATTCTT
151081 TTCAAGATTAGGCACCATAAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * *
151113 CATTAAGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCATTTTTTG
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTG
* * * ** * * * *
151177 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTATAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** * ** * * *
151240 TT-GGGATTATGCAAGAT-AACACT-TTTTTCT
125 TTCAAGATTAGGCACCATAAACA-TAGTCTTCA
* * * * * * * * **
151270 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * * *
151332 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTG-ATTCTCATAACAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CA-TGAATACTCATAATAATCTCCATTCTTT
* * * * *
151396 TCGAGATTGGGAACC--AAACACA-CCTTCA
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * * * * ***
151424 CTTCATTAGGAGACAAGACATTGATG-TTCGGTGTCACAAG-AAAGCCTTTTCTTCCCAAGGTTT
1 ---CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAG-CTTTTCTTTCCACCATTT
* * ** * *
151487 TTGATACAATCAAGGTTTGT-CTTTTGAGAAAGACGAACACGAATACTCATACTAATC-CCTATT
62 TTG-TAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATCTCC-ATT
** **
151550 CTTTTCTGGATTAGGCACCATAAACATAGTCTTTT
122 CTTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * * *
151585 TATTAGGATCCATGATATTGATGCTTCGGTTTTGCAAGAAAGGCTTTTAC--CCCACCAATTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTTTCCACC-ATTTTT
* * * * * * * * * * *
151648 GTA-AAGTCTATGTTCATGCCTCAAATAAGACAAACGTGGATTCT-AGTAATGATCTTCATTCAT
64 GTAGAA-TCAAGGTT-TTCCCTTAAAGAAGAC-AACATGAATACTCA-TAATAATCTCCATTC-T
** * * * *
151711 TTT-GTGATTAGGCACCATAAACACATTCTCCT
124 TTTCAAGATTAGGCACCATAAACATAGTCTTCA
** * * * ** * * * * *
151743 TGTTAGGATAAATGATATTGATGATTTTCTTTTC-CACGGAAATCATTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * * * *
151806 CT-TAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCG-ATTCTCATAA-AAGTCTCCATTC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * ***
151868 TTTCCAAGATTGGGAACCA-AAA-A-CCCCTTCA
123 TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
151899 CTTTCTTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTT
1 C---ATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
151964 TGATAGAATCAAGGTTTTCCACTTAAGGAAGACAAACATGAATAATCATAATAATCCCCATTCTT
63 TG-TAGAATCAAGGTTTTCC-CTTAAAGAAGAC-AACATGAATACTCATAATAATCTCCATTCTT
152029 TTCAAGATTAGGCACCATAAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
152061 CATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTT-TTCCCACCAATTTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTG
* * * ** * * * *
152125 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTATAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** ** * * *
152188 TT-GTGATTACACACGATAACACAT--TTTTCT
125 TTCAAGATTAGGCACCATAA-ACATAGTCTTCA
* * * * * * * * **
152218 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * * *
152280 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCG-ATTCTCATAAGAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* * * * * *
152344 ACGAGATTGGGAACC--AAACACA-CCTTCA
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * **
152372 CTTCATTAGGAGACATGATATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTCCCACGGTTT
1 ---CATTAAGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCATTT
* * * * * * * *
152436 TTAATAGAATCATGTTTTGTCTCTT-AAGAAAGACAAACAAGAATACTGATACTAATCAT-TATT
62 TT-GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATC-TCCATT
* * *
152499 CTTTTCAGGATTAGGCACCATAACCATAGTCTTCT
122 CTTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * * * *
152534 CATT-AGAATCCGTGATATTGATGCTTCGGTTTTGCAAGAGAGGCTTTT-ATCCCACCAGTTTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTT
* ** * * * * * *
152597 GTA-AAGTCTCA--TTTCGTGTCTCAAATG-AGACAAACATGGATTCT-AGTAGTGATCTTCATT
64 GTAGAA-TC-AAGGTTT--TCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATT
** * * * **
152657 CATTTT-GTGATTAGGCACCA-AAAGCACATTATTTT
122 C-TTTTCAAGATTAGGCACCATAAA-CATAGTCTTCA
* * * * * ** * * * * * *
152692 CTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAA-TTTTTC-TGCC-CTATTTTCCT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--T
* * * * * * * * *
152754 -TTGAATCAAAGTTCATCCCTTATATAAGACAAGCATCG-ATTCTCGTAACAGTCTCCATTC-TT
64 GTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* ** *
152816 TCAAGGATTAGGAAGCCA-AAATGTAATCCCTT--
126 TCAA-GATTAGGCA-CCATAAACATAGT--CTTCA
* * ** * *
152848 CTTTAAGATACATGACATTGATGCTTTGGTGCCACAAGAAAAGCTTTTCTTTCTACCATTTTTGA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG-
* * * * * **
152913 TAAAATCAAAGTTTATTTCC-TAAATAAGACAA-ACT---T--GC--ACGAATC-CCATTCTTTA
65 TAGAATC-AAGGTT-TTCCCTTAAAGAAGACAACA-TGAATACTCATAATAATCTCCATTCTTT-
* * * *
152968 TC-AGATTAGGCAGCGTAAACAAAGTCTTCT
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* ** * * * * *
152998 TATTTGGATGCACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTC-TTCCTACCAATTTTA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTT
* * * * * * * *
153061 GTA-AAGTTTAA-GTTCGTGCCTTAGAAG-AGACAAATATGGATTCT-AGTAATGAT-TATCATT
64 GTAGAA--TCAAGGTT-TTCCCTTA-AAGAAGAC-AACATGAATACTCA-TAATAATCT-CCATT
* ** * *
153121 CAATTT-GTGATTAGGCACCATAAACACATTCTCTC-
122 C-TTTTCAAGATTAGGCACCATAAACATAGTCT-TCA
* * * * ** * * * *
153156 CACTAGGATAAATGATATTGATGATTTTCTTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * * * * * * *
153219 CT-TAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCG-ATTCTCGTAA-AAGTCTCCATAC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * *
153281 TTTCCAAGATTAGGAACCAGAAACACCT-TTACTTC-
123 TTTTCAAGATTAGGCACCATAAACA--TAGT-CTTCA
* * * * * * * *
153316 C-TTAGGAGACATGACATTGACGCTTTGGTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTATGA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG-
* * * * *
153380 TAGAATCAAGGTTTGT-CTTTTAAGTATGACATACATGAATAATCATAATAATCCCCATTCTTTT
65 TAGAATCAAGGTTT-TCCCTTAAAG-AAGACA-ACATGAATACTCATAATAATCTCCATTCTTTT
*
153444 CAAGATTAGGCACCATAAACATAGTCTTCG
127 CAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
153474 CATTAAGATACACGATATTGATGCTTTGGTCTCGCAAGAAAGGCATTT-TTTCCTCCAATTTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTG
* * * ** * * * *
153538 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAAACATGGGTTCTTATAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGAC-AACATGAATACTCATAATAATCTCCATTC-TT
** * * * *
153601 TT-GTGATTACGCACGATAACACAT--TTTTCT
125 TTCAAGATTAGGCACCATAA-ACATAGTCTTCA
* * * * * * * * *
153631 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTTC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * ** * * * *
153693 TTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCG-ATTCTCATAAGAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* * * *
153757 TCGAGATTGGGAACCA-AACACACCT-TTACTT--
126 TCAAGATTAGGCACCATAA-ACA--TAGT-CTTCA
* * * * * * * ***
153788 CATTAGGAGACAAGACATTGATGCTTCGGTGTC-CTAAG-AAAGCCTTTTCTTCCCAAGGTTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGC-AAGAAAAG-CTTTTCTTTCCACCATTTTT
* ** * * *
153851 GGTAGAATCAAGGTTTGT-CTTTTGAGAAAGACGAACACGAATACTCATACTAATC-CATATTCT
64 -GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATCTC-CATTCT
* * *
153914 TTTCAGGATTAGGCACCATAAACATAGTCTACT
124 TTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * *
153947 TATT-AGCATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTAC--CCCACCAATTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTTTCCACC-ATTTT
* * * * * * * * *
154009 TGTA-AAGTCTAA-GTTCATGCCTCAAATG-AGACAAACGTGGATTCT-AGTAGTGATCTTCATT
63 TGTAGAA-TC-AAGGTT-TTCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATT
** * *
154070 CATTTT-GTGATTAGGCACCATAAACACATTC-TC-
122 C-TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * ** * * *
154103 C-TTGATAGGATAAATGATATTGATGATTTTCTTTTC-CACGAAAATCTTTTCTTTGCC-CTATT
1 CATT-A-A-GATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATT
* * * * * *
154165 TTCCT-TAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCG-ATTCTCATAA-AAGTCTCCA
61 TT--TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCA
* * * ***
154227 TTCTTTCCAAGATTGGGAACCA-AAA-A-CCCCTTCA
120 TTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
154261 CTTTCTTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTT
1 C---ATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
154326 TGATAGAATCAAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAATCCCCATTCTT
63 TG-TAGAATCAAGGTTTTCC-CTTAAAGAAGACA-ACATGAATACTCATAATAATCTCCATTCTT
154391 TTCAAGATTAGGCACCATAAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * *
154423 CATTAAGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCATTTTTTG
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTG
* * * ** * * * * *
154487 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTACAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** * * * * *
154550 TT-GTGATTATGCTA-GAT-AACACT-TTTTTCT
125 TTCAAGATTAGGC-ACCATAAACA-TAGTCTTCA
* * * * * * * * **
154580 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * *
154642 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTG-ATTCTCATAATAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CA-TGAATACTCATAATAATCTCCATTCTTT
* * * * *
154706 TCGAGATTGGGAACC--AAACACA-CCTTCACA
126 TCAAGATTAGGCACCATAAACATAGTCTT--CA
* * * * * * * ***
154736 TCATTAGGAGACAAGACATTGATG-TTCGGTGTC-CTAAG-AAAGCCTTTTCTTCCCAAGGTTTT
1 -CATTAAGATACATGATATTGATGCTTTGGTTTCGC-AAGAAAAG-CTTTTCTTTCCACCATTTT
* * * * *
154798 TGGTAGAATCAAGGTTTGT-CTTTTAAGAAAGACGAACACGAATACTCATACTAATC-CATATTC
63 T-GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATCTC-CATTC
* * *
154861 TTTTCAGGATTAGGCACCATAAACATAGTCTACT
123 TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * ***
154895 TATT-AGCATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-AGCCCACCAATTTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTT
* * * * * * * *
154958 GTA-AAGTCTAA-GTTCATGCCTCAAATG-AGACAAACGTGGATTCT-AGTAATGATCTTCATTC
64 GTAGAA-TC-AAGGTT-TTCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATTC
** * * * *
155019 ATTTT-GTGATTAGGCACCATAAACACATTCTCCT
123 -TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
** * * * ** * * * * *
155053 TGTTAGGATAAATGATATTGATGATTTTCTTTTC-CACGGAAATCATTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * * * *
155116 CT-TAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCG-ATTCTCATAA-AAGTCTCCATTC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * ***
155178 TTTCCAAGATTGGGAACCA-AAA-A-CCCCTTCA
123 TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
155209 CTTTCTTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTT
1 C---ATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
155274 TGATAGAATCAAGGTTTTCCACTTAAGGAAGACATACATGAATAATCATAATAATCCCCATTCTT
63 TG-TAGAATCAAGGTTTTCC-CTTAAAGAAGACA-ACATGAATACTCATAATAATCTCCATTCTT
155339 TTCAAGATTAGGCACCATAAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * *
155371 CATTAAGATACACGATATTGATGCTTTGGTTTCGCAAGAAAGGCATTT-TTCCCACCATTTTTTG
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTG
* * * ** * * * *
155435 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTATAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** * ** * * *
155498 TT-GGGATTATGCAAGAT-AACACT-TTTTTCT
125 TTCAAGATTAGGCACCATAAACA-TAGTCTTCA
* * * * * * * * **
155528 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * * *
155590 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTG-ATTCTCATAACAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CA-TGAATACTCATAATAATCTCCATTCTTT
* * * * *
155654 TCGAGATTGGGAACC--AAACACA-CCTTCA
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * * * * ***
155682 CTTCATTAGGAGACAAGACATTGATG-TTCGGTGTCACAAG-AAAGCCTTTTCTTCCCAAGGTTT
1 ---CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAG-CTTTTCTTTCCACCATTT
* * ** * *
155745 TTGATACAATCAAGGTTTGT-CTTTTGAGAAAGACGAACACGAATACTCATACTAATC-CCTATT
62 TTG-TAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATCTCC-ATT
** **
155808 CTTTTCTGGATTAGGCACCATAAACATAGTCTTTT
122 CTTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * * *
155843 TATTAGGATCCATGATATTGATGCTTCGGTTTTGCAAGAAAGGCTTTTAC--CCCACCAATTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT-CTTTCCACC-ATTTTT
* * * * * * * * * * *
155906 GTA-AAGTCTATGTTCATGCCTCAAATAAGACAAACGTGGATTCT-AGTAATGATCTTCATTCAT
64 GTAGAA-TCAAGGTT-TTCCCTTAAAGAAGAC-AACATGAATACTCA-TAATAATCTCCATTC-T
** * * * *
155969 TTT-GTGATTAGGCACCATAAACACATTCTCCT
124 TTTCAAGATTAGGCACCATAAACATAGTCTTCA
** * * * ** * * * * *
156001 TGTTAGGATAAATGATATTGATGATTTTCTTTTC-CACGGAAATCATTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * * * *
156064 CT-TAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCG-ATTCTCATAA-AAGTCTCCATTC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * ***
156126 TTTCCAAGATTGGGAACCA-AAA-A-CCCCTTCA
123 TTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
156157 CTTTCTTAGGAGACATGACATTGATGCTTTGGTCTCGCAAGAAAAGCTTTTCTTTTCACCATTTT
1 C---ATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT
* * *
156222 TGATAGAATCAAGGTTTTCCACTTAAGGAAGACAAACATGAATAATCATAATAATCCCCATTCTT
63 TG-TAGAATCAAGGTTTTCC-CTTAAAGAAGAC-AACATGAATACTCATAATAATCTCCATTCTT
156287 TTCAAGATTAGGCACCATAAACATAGTCTTCA
125 TTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
156319 CATTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTT-TTCCCACCAATTTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTG
* * * ** * * * *
156383 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTATAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** ** * * *
156446 TT-GTGATTACACACGATAACACAT--TTTTCT
125 TTCAAGATTAGGCACCATAA-ACATAGTCTTCA
* * * * * * * * **
156476 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * * *
156538 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCG-ATTCTCATAAGAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* * * * * *
156602 ACGAGATTGGGAACC--AAACACA-CCTTCA
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * **
156630 CTTCATTAGGAGACATGATATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTCCCACGGTTT
1 ---CATTAAGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCATTT
* * * * * * * *
156694 TTAATAGAATCATGTTTTGTCTCTT-AAGAAAGACAAACAAGAATACTGATACTAATCAT-TATT
62 TT-GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATC-TCCATT
* * *
156757 CTTTTCAGGATTAGGCACCATAACCATAGTCTTCT
122 CTTTTCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * * * *
156792 CATT-AGAATCCGTGATATTGATGCTTCGGTTTTGCAAGAGAGGCTTTT-ATCCCACCAGTTTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTT
* ** * * * * * *
156855 GTA-AAGTCTCA--TTTCGTGTCTCAAATG-AGACAAACATGGATTCT-AGTAGTGATCTTCATT
64 GTAGAA-TC-AAGGTTT--TCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATT
** * * * **
156915 CATTTT-GTGATTAGGCACCA-AAAGCACATTATTTT
122 C-TTTTCAAGATTAGGCACCATAAA-CATAGTCTTCA
* * * * * ** * * * * * *
156950 CTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAA-TTTTTC-TGCC-CTATTTTCCT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--T
* * * * * * * * *
157012 -TTGAATCAAAGTTCATCCCTTATATAAGACAAGCATCG-ATTCTCGTAACAGTCTCCATTC-TT
64 GTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* ** *
157074 TCAAGGATTAGGAAGCCA-AAATGTAATCCCTT--
126 TCAA-GATTAGGCA-CCATAAACATAGT--CTTCA
* * ** ** *
157106 CTTTAAGATACATGACATTGATGCTTTGGTGCCATAAGAAAAGCTTTTCTTTCTACCATTTTTGA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG-
* * * * * **
157171 TAAAATCAAAGTTTATTTCC-TAAATAAGACAA-ACT---T--GC--ACGAATC-CCATTCTTTA
65 TAGAATC-AAGGTT-TTCCCTTAAAGAAGACAACA-TGAATACTCATAATAATCTCCATTCTTT-
* * * *
157226 TC-AGATTAGGCAGCGTAAACAAAGTCTTCT
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* ** * * * * *
157256 TATTTGGATGCACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTC-TTCCTACCAATTTTA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTT
* * * * * * * *
157319 GTA-AAGTTTAA-GTTCGTGCCTTAGAAG-AGACAAATATGGATTCT-AGTAATGAT-TATCATT
64 GTAGAA--TCAAGGTT-TTCCCTTA-AAGAAGAC-AACATGAATACTCA-TAATAATCT-CCATT
* ** * *
157379 CAATTT-GTGATTAGGCACCATAAACACATTCTCTC-
122 C-TTTTCAAGATTAGGCACCATAAACATAGTCT-TCA
* * * * ** * * * *
157414 CACTAGGATAAATGATATTGATGATTTTCTTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * * * * * * *
157477 CT-TAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCG-ATTCTCGTAA-AAGTCTCCATAC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * *
157539 TTTCCAAGATTAGGAACCAGAAACACCT-TTACTTC-
123 TTTTCAAGATTAGGCACCATAAACA--TAGT-CTTCA
* * * * * * * *
157574 C-TTAGGAGACATGACATTGACGCTTTGGTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTATGA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG-
* * * * *
157638 TAGAATCAAGGTTTGT-CTTTTAAGTATGACATACATGAATAATCATAATAATCCCCATTCTTTT
65 TAGAATCAAGGTTT-TCCCTTAAAG-AAGACA-ACATGAATACTCATAATAATCTCCATTCTTTT
*
157702 CAAGATTAGGCACCATAAACATAGTCTTCG
127 CAAGATTAGGCACCATAAACATAGTCTTCA
* * * * * *
157732 CATTAAGATACACGATATTGATGCTTTGGTCTCGCAAGAAAGGCATTT-TTTCCTCCAATTTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTG
* * * ** * * * *
157796 TA-AAGCCTAA-GTTTGTGCCTTAAATAAGACAATCATGGGTTCTTATAATGATCTTCATTCATT
65 TAGAA-TC-AAGGTTT-TCCCTTAAAGAAGACAA-CATGAATACTCATAATAATCTCCATTC-TT
** * * * *
157859 TT-GTGATTACGCACGATAACACAT--TTTTCT
125 TTCAAGATTAGGCACCATAA-ACATAGTCTTCA
* * * * * * * * **
157889 CAATAAGATAAATGATATTGATGATTT-TTTTC-CATGGAAATCTTTTCTTTGCC-CTATTTTCC
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTTG
* * * * * * * *
157951 TTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCG-ATTCTCATAAGAGTCTCCATTCTTT
65 TAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* * * * * *
158015 ACGAGATTGGGAACC--AAACACA-CCTTCA
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * **
158043 CTTCATTAGGAGACATGATATTGATGCTTTGGTGTT-GCAAGAGAAGCTTTTCTTCCCACGTTTT
1 ---CATTAAGATACATGATATTGATGCTTTGGT-TTCGCAAGAAAAGCTTTTCTTTCCACCATTT
* * * * * * *
158107 TTAATAGAATCAAGTTTTGTCTCTT-AAGAAAGACAAACAAGAATACTGATACTAATCAT-TATT
62 TT-GTAGAATCAAGGTTT-TCCCTTAAAG-AAGAC-AACATGAATACTCATAATAATC-TCCATT
* *
158170 CTTTTCAGGATTAGGCACCAT-AACAATAGTCTTCT
122 CTTTTCAAGATTAGGCACCATAAAC-ATAGTCTTCA
* ** * * * ***
158205 CATT-AGAATACGTGATATTGATGCTTCAGTTTTGCAAGATAGGCTTTT-AACCCACCAGTTTTT
1 CATTAAG-ATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTT
** * * * * * *
158268 GTA-AAGTCTAA--TTTCGTGTCTCAAATG-AGACAAACATGGATTCT-AGTAGTGATCTTCATT
64 GTAGAA-TC-AAGGTTT--TCCCTTAAA-GAAGAC-AACATGAATACTCA-TAATAATCTCCATT
** * * * **
158328 CATTTT-GTGATTAGGCACCA-AAAGCACATTATTTT
122 C-TTTTCAAGATTAGGCACCATAAA-CATAGTCTTCA
* * * * * ** * * * * * *
158363 CTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAA-TTTTTC-TGCC-CTATTTTCCT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTT--T
* * * * * * * * *
158425 -TTGAATCAAAGTTCATCCCTTATATAAGACAAGCATCG-ATTCTCGTAACAGTCTCCATTC-TT
64 GTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTTT
* ** *
158487 TCAAGGATTAGGAAGCCA-AAATGTAATCCCTT--
126 TCAA-GATTAGGCA-CCATAAACATAGT--CTTCA
* * * * * *
158519 CTTTAAGATACATGACATTGATGCTTTGGTGTCACAAGAAAAGCTTTTCTTTCTACCATTTTTTA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCA-TTTTTG
* * * * * * *
158584 TAAAATCAAAGTTTATTTCC-TAAATAAGACAAACTTG--GA--C----GAATC-CCATTCTTTA
65 TAGAATC-AAGGTT-TTCCCTTAAAGAAGAC-AACATGAATACTCATAATAATCTCCATTCTTT-
* * * * *
158639 TC-AGATTAGGTAGCGTAAACAAAGTCTTCT
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* ** * * * * *
158669 TATTTGGATGCACGATATTGATGCTTTGGTTTCACAAGAAAGGC-TTTC-TTCCTACCAATTTTA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCC-ACC-ATTTTT
** * * * * *
158732 GTA-AAGTCTAA-GTGCGTGCCTTAGAAG-AGACAAACATGGATTCT-AGTAATGAT-TATCATT
64 GTAGAA-TC-AAGGT-TTTCCCTTA-AAGAAGAC-AACATGAATACTCA-TAATAATCT-CCATT
* ** * *
158792 CAATTT-GTGATTAGGCACCATAAACACATTCTCTC-
122 C-TTTTCAAGATTAGGCACCATAAACATAGTCT-TCA
* ** * * ** ** * * *
158827 CACTGGGATAAATGATATTGATGATTTTTTTTTC-CTTGGAAATCTTTTCTTTGCC-CTATTTTC
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTT-
* * * *** * * *
158890 CT-TAAAATCAAAGTTAATCCCTTAGTTAAGACAAGGATCG-ATTCTCGTAA-AAGTCTCCATTC
63 -TGTAGAATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAA-TCTCCATTC
* * * *
158952 TTTCCAAGATTAGGAACCAGAAACACCT-TTACTTC-
123 TTTTCAAGATTAGGCACCATAAACA--TAGT-CTTCA
* * * * * * * * *
158987 C-TTAGGAGACATGACATTGACGCTTTAGTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTGTGA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG-
* * * *
159051 TAGAATCAAGGTTTGTCTCTT-AAGTATGACATACATGAATAATCATAATAATC-CGCTTTCTTT
65 TAGAATCAAGGTTT-TCCCTTAAAG-AAGACA-ACATGAATACTCATAATAATCTC-CATTCTTT
* *
159114 TCAAGATTAGGCACCAGAAACATAGTCTTCG
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * * *
159145 CATTAAGATACACGATATTGATGCTTTGGTCTCGCAAGAAAGGCATTT-TTTCCTCCAATTTTTG
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACC-ATTTTTG
* * * * * ** *
159209 TA-AAGCCTAA-GTTGTGCCTTAAATG-AGACAAACATGGACT-CTTATAACGATCTTCATTCAT
65 TAGAA-TC-AAGGTTTTCCCTTAAA-GAAGAC-AACAT-GAATACTCATAATAATCTCCATTC-T
** ** * *
159270 TTT-GTGATTACACACCATAACACAT--TCTCCC
124 TTTCAAGATTAGGCACCATAA-ACATAGTCTTCA
* * * ** * * * *
159301 CATTAGGATAAATGATATTGATGATTTTCTTTTC-TATGAAAATCTTTTCTTTGCC-CTATTTTT
1 CATTAAGATACATGATATTGATG-CTTTGGTTTCGCAAGAAAAGCTTTTCTTT-CCACCATTTTT
* * * * * ** * ** *
159364 CTTGAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG-ATTTTAATACCAGTCTCCATTCTT
64 GTAG-AATCAAGGTT-TTCCCTTAAAGAAGACAA-CAT-GAATACTCATAATAATCTCCATTCTT
* * * * ***
159428 TTCGAGATTGGGAACCAAAAACACCTCCACTT--
125 TTCAAGATTAGGCACCATAAACA--TAGTCTTCA
* * * * * * * **
159460 CATTAGGAAATATGATATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTATTCCCACGGTTTTTGA
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTG-
* * * * *
159525 TAGAATCAAGATTTAT-CCTTTAAGAAAGACAATCAAGAATGCTCATACTAATC-CCTATTCTTT
65 TAGAATCAAGGTTT-TCCCTTAAAG-AAGACAA-CATGAATACTCATAATAATCTCC-ATTCTTT
* * *
159588 TCGAGATTAGGCACCATAAACATAGTATTCT
126 TCAAGATTAGGCACCATAAACATAGTCTTCA
* * * *
159619 CATTAAGATCCATGATATTGATGCTTTGGTTTTGCGAGAAAGGCTTTT
1 CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTT
159667 TCCCCACCAA
Statistics
Matches: 7375, Mismatches: 2208, Indels: 1738
0.65 0.20 0.15
Matches are distributed among these distances:
148 38 0.01
149 66 0.01
150 186 0.03
151 22 0.00
152 6 0.00
153 13 0.00
154 34 0.00
155 241 0.03
156 733 0.10
157 780 0.11
158 2087 0.28
159 2814 0.38
160 259 0.04
161 44 0.01
162 52 0.01
ACGTcount: A:0.31, C:0.19, G:0.15, T:0.35
Consensus pattern (156 bp):
CATTAAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTGT
AGAATCAAGGTTTTCCCTTAAAGAAGACAACATGAATACTCATAATAATCTCCATTCTTTTCAAG
ATTAGGCACCATAAACATAGTCTTCA
Found at i:150807 original size:473 final size:472
Alignment explanation
Indices: 147760--180119 Score: 24289
Period size: 473 Copynumber: 67.5 Consensus size: 472
147750 TTGCATGAAT
* * * * * * *
147760 CCCATTCTTTTCCGGATTAGGCACCGTAAAGAAAGTCTTCTCCTCAGGATACACGGTATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
147825 TTTGATTTCGCAAGAAAGGCTTTCTTCCCACCAGTTTTAGTAAAGCCTAAGTTCGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * * *
147890 GATACAAACATGGATTCTAGTAATGAT-TATCATTTATTTAGTGATTAGGCACCGTAACCACTTT
130 GAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACATT
** * * ** *
147954 CTCCTTTTTAGGATAAACGA-ATTTGATGATTTTCTTTTGCATTAAAATCTTTTATTTGCCCTAT
194 CTCCTCATTAGGATAAATGATA-TTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * * **
148018 TTT-TTTAAAATCAAAGTTCATCCCCTAAATAA-AAAAGGCATCTATTCTTGTAACAGTCTCCAT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAA-GCATCGATTCTCATAACAGTCTCCAT
* * * * * * * * *
148081 TCTTTTAAAGAATGGGATGCTAAAACACATTCCCTTCTTTAGGAAACATG-CTGTTGATGCTTTG
322 TCTTTTCAAGATTGGGA-ACCAAAACACCTTCACTTCATTAGGAGACATGAC-ATTGATGCTTTG
* * * * * ** * * * *
148145 GTGTCGTAAGAAAAACTTTTGTTTCTACCGCTTTTGATAAAATCAAAGTTTAT-TTCCTAA-ATA
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-A
*
148208 AGACAA-AC---T--TGC--ACGAAT-
447 AGACAACACGAATACT-CATACTAATC
* * * *
148226 CCCATTCTTTTTC-GGATTAGGCACCGTAAACAAAGTCTTCTCATTGGGATACACAATATTGATG
1 CCCATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * *
148290 CTTTGG-TTTGCAAGAAAGGCTTTCTTTCCACTAATTTTAGTAAAGTCTAAGTTCGTGCCTTAAA
65 CTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* * * *
148354 TGAGACAAACATAGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAACCACTT
129 TGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACAT
** * * ** *
148418 TCTCCTTTTTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTAATTGCCTTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* *** ** *
148483 TTTCCTT-AACATCAAAGTTCATTCCC-TAAATAAAAGGGGCATATATTCTCGTAACAGTCTCCA
258 TTTCCTTGAA-ATCAAAGTTCA-TCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * * * * * ***
148546 TTCTTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTTGGAGACATGTTGTTGATGCTTT
321 TTC-TTTTCAAGATTGGGA-ACCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTT
* * * * * * * * * *
148611 GGTGTTGTAAGAAAAACTTTTGTTTCTACCATTTTTAATAGAACCAAAGTTTGTC-TCT-A-AAA
384 GGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAA
*
148673 GA-AAAACTTGAATACTCATACTAATC
448 GACAACAC--GAATACTCATACTAATC
* * * ** * *
148699 CCCATTCTTTTTC-GGATTATGTATCATATGCATAGTCTTCTCATTATGATGCACGATATTGATG
1 CCCATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * * * * *
148763 CTGTGGTTTTGAAAGAAAGACATTTTTCCCACCAACTTTTTGTAAAGCCTAACTTCGTGCCTCAA
65 CTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTCGTGCCTTAA
* * * * * * * *
148828 CTGAGACAAATATGGATTCCAGTAATGATCCTCATTCGTTTTGTGCTTAGGTACGATAAACACAT
128 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* * * *
148893 TCCCCTCATTAGGAAAAATGATATTGATGATTTTCTTTTGCGTGGAAATCTTTTC-TT-CCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * *
148956 TTTACTTCAAACCAAAGTTCATCCCATAAATAAGACAAGGATCGATTCTTATAACAGTCTCCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * * ** * *
149021 ATTTTGAAGATTGAGAAGCGAAAATGCATTCCCTTCATTAGGATG-CATGACATTGATGCTTTGG
323 CTTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCATTAGGA-GACATGACATTGATGCTTTGG
* * * * * ** * *
149085 TGTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTTACAAAATCAAATTTTATCTCTTAA-ATAAG
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-AAG
*
149149 ACAAACACAAATACTCATACCT-ATC
449 AC-AACACGAATACTCATA-CTAATC
* * * * ** *
149174 CCCATTCTTTTTAGGATCAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTAATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * ** * * * * *
149239 TTTAGTTTCGCAAAAAAAGGCATTGCTCACACCAATTTTTGAAAAGCCTAAGTTTGTGCCTCAAA
66 TTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* * *
149304 TGAGACAAACATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AACACAT
129 TGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* * * *
149367 TTTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * *
149430 TTTTCTTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * *
149495 CTTTTCGAGATTGGGAACCAAACACACCTTTACTTCATTAGGAGACAAGACATTGATGCTTCGGT
323 CTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
*** * *
149560 GTC-CTAAGAAAGCCTTTTCTTCCCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTGAGAAAGA
387 GTCGC-AAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
149624 CGAACACGAATACTCATACTAATC
450 C-AACACGAATACTCATACTAATC
** * * * * *
149648 CATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
149713 TTTGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
149778 GAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
* * *
149843 TCCTTGA-TAGGATAAATGATATTGATGATTTTCTTTTCCACGAAAATCTTTTCTTTGCCCTATT
195 TCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * *
149907 TTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* *
149972 TTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTGGT
324 TTTTCAAGATTGGGAACC-AAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTGGT
* ** ** *
150036 CTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGAAGA
387 GTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGT-CTTTTAAGAAAGA
* * *
150100 CATACATGAATAATCATAATAATC
450 CA-ACACGAATACTCATACTAATC
* * *
150124 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
150189 TTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * * * *
150254 AAGACAATCATGGGTTCTTA-CAATGATCTTCATTCATTTTGTGATTATGCTA-GAT-AACACTT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGC-ACCATAAACACAT
* * * *
150316 TTTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * *
150379 TTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAATAGTCTCCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * *
150444 CTTTTCGAGATTGGGAACCAAACACACCTTCACATCATTAGGAGACAAGACATTGATG-TTCGGT
323 CTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
*** *
150508 GTC-CTAAGAAAGCCTTTTCTTCCCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTAAGAAAGA
387 GTCGC-AAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
150572 CGAACACGAATACTCATACTAATC
450 C-AACACGAATACTCATACTAATC
** * * * * *
150596 CATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
150661 TTTGGTTTTGCAAGAAAGGCTTTTAGCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
150726 GAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
** * *
150791 TCCTTGTTAGGATAAATGATATTGATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTATTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * *
150856 TCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTCT
260 TCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCT
* * *
150921 TTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTGGTC
325 TTTCAAGATTGGGAACC-AAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTGGTG
** ** *
150985 TCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGAAGAC
388 TCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGT-CTTTTAAGAAAGAC
* * *
151049 ATACATGAATAATCATAATAATC
451 A-ACACGAATACTCATACTAATC
* * *
151072 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
151137 TTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * * ** *
151202 AAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGGGATTATGCAAGAT-AACACTTT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * *
151265 TTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* *
151328 TTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAACAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * *
151393 TTTTCGAGATTGGGAACCAAACACACCTTCACTTCATTAGGAGACAAGACATTGATG-TTCGGTG
324 TTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* *** * *
151457 TCACAAGAAAGCCTTTTCTTCCCAAGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGAAAGACG
388 TCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
151522 AACACGAATACTCATACTAATC
451 AACACGAATACTCATACTAATC
* * * * * *
151544 CCTATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTTTTATTAGGATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
151609 TTCGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTATGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
151674 AAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
** * *
151739 TCCTTGTTAGGATAAATGATATTGATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTATTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * *
151804 TCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTCT
260 TCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCT
* * *
151869 TTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTGGTC
325 TTTCAAGATTGGGAACC-AAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTGGTG
** ** *
151933 TCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGAAGAC
388 TCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGT-CTTTTAAGAAAGAC
* * *
151997 AAACATGAATAATCATAATAATC
451 -AACACGAATACTCATACTAATC
* * *
152020 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
152085 TTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * ** *
152150 AAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACGAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * *
152213 TTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* *
152276 TTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * *
152341 TTTACGAGATTGGGAACCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* ** * * * *
152406 TTGCAAGAGAAGCTTTTCTTCCCACGGTTTTTAATAGAATCATGTTTTGTCTCTTAAGAAAGACA
388 TCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
* *
152471 AACAAGAATACTGATACTAATC
451 AACACGAATACTCATACTAATC
*** * * * **
152493 ATTATTCTTTTCAGGATTAGGCACCATAACCATAGTCTTCTCATTAGAATCCGTGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * *
152558 TTCGGTTTTGCAAGAGAGGCTTTTATCCCACCAGTTTTTGTAAAGTCTCATTTCGTGTCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
152623 GAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGCACATT
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA-CACATT
* ** * * *
152687 ATTTTCTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAAT-TTTTC--TGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * *
152749 TTCCTTTG-AATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCTCCATT
259 TTCC-TTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* ***** * * * *
152813 C-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGCTTTGG
323 CTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * * * * * *
152877 TGCCACAAGAAAAGCTTTTCTTTCTACCATTTTTGATAAAATCAAAGTTTAT-TTCCTAA-ATAA
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-AA
*
152940 GACAA-AC---T--TGC--ACGAAT-
448 GACAACACGAATACT-CATACTAATC
* * * * * *
152957 CCCATTCTTTATCA-GATTAGGCAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATTGATG
1 CCCATTCTTT-TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
** * * *
153021 CTTTGGTTTCACAAGAAAGGCTTTCTTCCTACCAATTTTAGTAAAGTTTAAGTTCGTGCCTTAGA
65 CTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTA-A
* *
153086 A-GAGACAAATATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAACACA
128 ATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACA
*
153149 TTCT-CTCCACTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
192 TTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * * * * * *
153213 ATTTTCCTTAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCGATTCTCGTAAAAGTCTCCA
256 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * *
153278 TACTTTCCAAGATTAGGAACCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGACGCTTTG
321 TTCTTTTCAAGATTGGGAACCA-AAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTG
* * * * * *
153343 GTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTATGATAGAATCAAGGTTTGTCTTTTAAGTATG
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAG
* * *
153408 ACATACATGAATAATCATAATAATC
449 ACA-ACACGAATACTCATACTAATC
* * *
153433 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCGCATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * *
153498 TTTGGTCTCGCAAGAAAGGCATTTTTTCCTCCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * *
153563 AAGACAAACATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * *
153626 TTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * *
153689 TTTCTTGAAATCAAAGTTCATGCCAGAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * *
153754 TTTTCGAGATTGGGAACCAAACACACCTTTACTTCATTAGGAGACAAGACATTGATGCTTCGGTG
324 TTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
*** * *
153819 TC-CTAAGAAAGCCTTTTCTTCCCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTGAGAAAGAC
388 TCGC-AAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC
153883 GAACACGAATACTCATACTAATC
451 -AACACGAATACTCATACTAATC
** * * * * *
153906 CATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
153971 TTTGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
154036 GAGACAAACGTGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
* * *
154101 TCCTTGA-TAGGATAAATGATATTGATGATTTTCTTTTCCACGAAAATCTTTTCTTTGCCCTATT
195 TCC-TCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * *
154165 TTCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* *
154230 TTTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTGGT
324 TTTTCAAGATTGGGAACC-AAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTGGT
* ** ** *
154294 CTCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGAAGA
387 GTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGT-CTTTTAAGAAAGA
* * *
154358 CATACATGAATAATCATAATAATC
450 CA-ACACGAATACTCATACTAATC
* * *
154382 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
154447 TTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * * * *
154512 AAGACAATCATGGGTTCTTA-CAATGATCTTCATTCATTTTGTGATTATGCTA-GAT-AACACTT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGC-ACCATAAACACAT
* * * *
154574 TTTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * *
154637 TTTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAATAGTCTCCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * *
154702 CTTTTCGAGATTGGGAACCAAACACACCTTCACATCATTAGGAGACAAGACATTGATG-TTCGGT
323 CTTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
*** *
154766 GTC-CTAAGAAAGCCTTTTCTTCCCAAGGTTTTTGGTAGAATCAAGGTTTGTCTTTTAAGAAAGA
387 GTCGC-AAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
154830 CGAACACGAATACTCATACTAATC
450 C-AACACGAATACTCATACTAATC
** * * * * *
154854 CATATTCTTTTCAGGATTAGGCACCATAAACATAGTCTACTTATTAGCATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
154919 TTTGGTTTTGCAAGAAAGGCTTTTAGCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
154984 GAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
** * *
155049 TCCTTGTTAGGATAAATGATATTGATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTATTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * *
155114 TCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTCT
260 TCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCT
* * *
155179 TTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTGGTC
325 TTTCAAGATTGGGAACC-AAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTGGTG
** ** *
155243 TCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGAAGAC
388 TCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGT-CTTTTAAGAAAGAC
* * *
155307 ATACATGAATAATCATAATAATC
451 A-ACACGAATACTCATACTAATC
* * *
155330 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
155395 TTTGGTTTCGCAAGAAAGGCATTTTTCCCACCATTTTTTGTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * * ** *
155460 AAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGGGATTATGCAAGAT-AACACTTT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * *
155523 TTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* *
155586 TTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATTGATTCTCATAACAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * *
155651 TTTTCGAGATTGGGAACCAAACACACCTTCACTTCATTAGGAGACAAGACATTGATG-TTCGGTG
324 TTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* *** * *
155715 TCACAAGAAAGCCTTTTCTTCCCAAGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGAAAGACG
388 TCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
155780 AACACGAATACTCATACTAATC
451 AACACGAATACTCATACTAATC
* * * * * *
155802 CCTATTCTTTTCTGGATTAGGCACCATAAACATAGTCTTTTTATTAGGATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
155867 TTCGGTTTTGCAAGAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTATGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
155932 AAGACAAACGTGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
** * *
155997 TCCTTGTTAGGATAAATGATATTGATGATTTTCTTTTCCACGGAAATCATTTCTTTGCCCTATTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * *
156062 TCCTTAAAATCAAAGTTAATCCCATAAATAAGACAAGCATCGATTCTCATAAAAGTCTCCATTCT
260 TCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCT
* * *
156127 TTCCAAGATTGGGAACCAAAAACCCCTTCACTTTC-TTAGGAGACATGACATTGATGCTTTGGTC
325 TTTCAAGATTGGGAACC-AAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTGGTG
** ** *
156191 TCGCAAGAAAAGCTTTTCTTTTCACCATTTTTGATAGAATCAAGGTTT-TCCACTTAAGGAAGAC
388 TCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGT-CTTTTAAGAAAGAC
* * *
156255 AAACATGAATAATCATAATAATC
451 -AACACGAATACTCATACTAATC
* * *
156278 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
156343 TTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * ** *
156408 AAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACGAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * *
156471 TTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* *
156534 TTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * *
156599 TTTACGAGATTGGGAACCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* ** * * * *
156664 TTGCAAGAGAAGCTTTTCTTCCCACGGTTTTTAATAGAATCATGTTTTGTCTCTTAAGAAAGACA
388 TCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
* *
156729 AACAAGAATACTGATACTAATC
451 AACACGAATACTCATACTAATC
*** * * * **
156751 ATTATTCTTTTCAGGATTAGGCACCATAACCATAGTCTTCTCATTAGAATCCGTGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * *
156816 TTCGGTTTTGCAAGAGAGGCTTTTATCCCACCAGTTTTTGTAAAGTCTCATTTCGTGTCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
156881 GAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGCACATT
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA-CACATT
* ** * * *
156945 ATTTTCTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAAT-TTTTC--TGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * *
157007 TTCCTTTG-AATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCTCCATT
259 TTCC-TTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* ***** * * * *
157071 C-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGCTTTGG
323 CTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* ** * * * * * *
157135 TGCCATAAGAAAAGCTTTTCTTTCTACCATTTTTGATAAAATCAAAGTTTAT-TTCCTAA-ATAA
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-AA
*
157198 GACAA-AC---T--TGC--ACGAAT-
448 GACAACACGAATACT-CATACTAATC
* * * * * *
157215 CCCATTCTTTATCA-GATTAGGCAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATTGATG
1 CCCATTCTTT-TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
** * * *
157279 CTTTGGTTTCACAAGAAAGGCTTTCTTCCTACCAATTTTAGTAAAGTTTAAGTTCGTGCCTTAGA
65 CTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTA-A
* *
157344 A-GAGACAAATATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAACACA
128 ATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACA
*
157407 TTCT-CTCCACTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
192 TTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * * * * * *
157471 ATTTTCCTTAAAATCAAAGTTAATCCCTTAGATAAGACAAGGATCGATTCTCGTAAAAGTCTCCA
256 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * *
157536 TACTTTCCAAGATTAGGAACCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGACGCTTTG
321 TTCTTTTCAAGATTGGGAACCA-AAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTG
* * * * * *
157601 GTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTATGATAGAATCAAGGTTTGTCTTTTAAGTATG
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAG
* * *
157666 ACATACATGAATAATCATAATAATC
449 ACA-ACACGAATACTCATACTAATC
* * *
157691 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCGCATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * *
157756 TTTGGTCTCGCAAGAAAGGCATTTTTTCCTCCAATTTTTTTAAAGCCTAAGTTTGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * *
157821 AAGACAATCATGGGTTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACGAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * *
157884 TTTCTCAATAAGATAAATGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* *
157947 TTCCTTGAAATCAAAGTTCATCCCATAAACAAGACAAGCATCGATTCTCATAAGAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * *
158012 TTTACGAGATTGGGAACCAAACACACCTTCACTTCATTAGGAGACATGATATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACCAAA-ACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* ** * * *
158077 TTGCAAGAGAAGCTTTTCTTCCCACGTTTTTTAATAGAATCAAGTTTTGTCTCTTAAGAAAGACA
388 TCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
* *
158142 AACAAGAATACTGATACTAATC
451 AACACGAATACTCATACTAATC
*** * **
158164 ATTATTCTTTTCAGGATTAGGCACCAT-AACAATAGTCTTCTCATTAGAATACGTGATATTGATG
1 CCCATTCTTTTCAGGATTAGGCACCATAAAC-ATAGTCTTCTCATTAGGATACACGATATTGATG
** * * * * * *
158228 CTTCAGTTTTGCAAGATAGGCTTTTAACCCACCAGTTTTTGTAAAGTCTAATTTCGTGTCTCAAA
65 CTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
*
158293 TGAGACAAACATGGATTCTAGTAGTGATCTTCATTCATTTTGTGATTAGGCACCA-AAAGCACAT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAA-CACAT
* ** * * *
158357 TATTTTCTTTAGGAAAAATGATATTGATGATTTTCTTTTGCATGGAAAT-TTTTC--TGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * *
158419 TTTCCTTTG-AATCAAAGTTCATCCCTTATATAAGACAAGCATCGATTCTCGTAACAGTCTCCAT
258 TTTCC-TTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* ***** * * * *
158483 TC-TTTCAAGGATTAGGAAGCCAAAATGTAATCCCTTCTTTAAGATACATGACATTGATGCTTTG
322 TCTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTG
* * * * * * * *
158547 GTGTCACAAGAAAAGCTTTTCTTTCTACCATTTTTTATAAAATCAAAGTTTAT-TTCCTAA-ATA
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-A
** *
158610 AGACAA-AC---T--T-GGACGAAT-
447 AGACAACACGAATACTCATACTAATC
* * * * * * *
158628 CCCATTCTTTATCA-GATTAGGTAGCGTAAACAAAGTCTTCTTATTTGGATGCACGATATTGATG
1 CCCATTCTTT-TCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
** * * *
158692 CTTTGGTTTCACAAGAAAGGCTTTCTTCCTACCAATTTTAGTAAAGTCTAAGTGCGTGCCTTAGA
65 CTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTA-A
*
158757 A-GAGACAAACATGGATTCTAGTAATGAT-TATCATTCAATTTGTGATTAGGCACCATAAACACA
128 ATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACA
* * * *
158820 TTCT-CTCCACTGGGATAAATGATATTGATGATTTTTTTTTCCTTGGAAATCTTTTCTTTGCCCT
192 TTCTCCT-CATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * * ** * * *
158884 ATTTTCCTTAAAATCAAAGTTAATCCCTTAGTTAAGACAAGGATCGATTCTCGTAAAAGTCTCCA
256 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * * *
158949 TTCTTTCCAAGATTAGGAACCAGAAACACCTTTACTTCCTTAGGAGACATGACATTGACGCTTTA
321 TTCTTTTCAAGATTGGGAACCA-AAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTG
* * * * * * *
159014 GTGTCGCATGAAAAGCTTTTCTTTCCGCCATTTGTGATAGAATCAAGGTTTGTCTCTTAAGTATG
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAG
* * *
159079 ACATACATGAATAATCATAATAATC
449 ACA-ACACGAATACTCATACTAATC
* * * * * *
159104 CGCTTTCTTTTCAAGATTAGGCACCAGAAACATAGTCTTCGCATTAAGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
159169 TTTGGTCTCGCAAGAAAGGCATTTTTTCCTCCAATTTTTGTAAAGCCTAAGTT-GTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * **
159233 GAGACAAACATGGACTCTTA-TAACGATCTTCATTCATTTTGTGATTACACACCAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * *
159296 CTCCCCATTAGGATAAATGATATTGATGATTTTCTTTTCTATGAAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * *
159361 TTTCTTGAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTTTAATACCAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * * *
159426 TTTTCGAGATTGGGAACCAAAAACACCTCCACTTCATTAGGAAATATGATATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* ** * * *
159491 TCGCAAGAGAAGCTTTTATTCCCACGGTTTTTGATAGAATCAAGATTTATCCTTTAAGAAAGACA
388 TCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGACA
* *
159556 ATCAAGAATGCTCATACTAATC
452 A-CACGAATACTCATACTAATC
* * * * *
159578 CCTATTCTTTTC-GAGATTAGGCACCATAAACATAGTATTCTCATTAAGATCCATGATATTGATG
1 CCCATTCTTTTCAG-GATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * * *
159642 CTTTGGTTTTGCGAGAAAGGCTTTTTCCCCACCAATTTTTGCAAAGTCTAAGTTCGTGTCTCAAA
65 CTTTGGTTTTGCAAGAAAGGCTTTTT-CCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* *
159707 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCGTAAATACATT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
** * * * *
159772 CTTTTCATTAGGAAAAATGTTATTGATGATTTTCTTTTGCGTGGAAATC-TTT-TTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * *
159835 TTCCTTCG-AATCAAAGTTCATTCCTTAAATAAGACAAGCATCGATTCTCGTAACAGTCTCTATT
259 TTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * ** * * * *
159899 CTTTT-AAGGATTAGGAAGCTAAAACGCAATCCCTTCTTTAGGATACATGACACTGATGCTTTGG
323 CTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * * * * *
159963 TGTCGCAAGAAAAACTTTTGTTTCTACCATTTTCT-ATAGAACCAAAGTTTGTC-TCT-A-AAAG
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTT-TGATAGAATCAAGGTTTGTCTTTTAAGAAAG
*
160024 GCAA-ACTTGAATACTCATACTAATC
449 ACAACAC--GAATACTCATACTAATC
* ** * ** *
160049 CCTATTCTTTTTTGGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACGCGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
160114 TTTGGTTTTGCAAAAAAGGCATTTTTCTCACCAATTTTTTGTAAAGCCTAACTTCGTGCCTCAAA
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA-TTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* * * *
160179 TGAGGCAAACATGGACTCTAGTAATGATCTTCATTCATTTTGTGATTATGTACCATAAACACATT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * * * *
160244 CCCCTCTTTAGGAAAAATGATATTGATGATTTTCTTTTACATGAAAATGTTTTC--TGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * * ** *
160307 TTCCTTCAAACCAAAGTTTATCCCTTAAATAAGACAAGGATTTATTCTTATAACAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * * * * *
160372 TTTTAAAGATTGAGAAGCTAAAACGCATTCCCTTCATTAGGATACATGACATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* * * * * * * *
160437 TCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTACAAAATCAAAGTTTATCTATTAA-ATAAAAC
388 TCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-AAGAC
**
160501 AAACACGTTTACTCATACTAATC
451 -AACACGAATACTCATACTAATC
* * * * * * ** *
160524 CCCATACTTTTTACGATTAGGCACTATTAACATAGTCTTCACATTTTGATGCACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * *
160589 TTTAGTTTCGCAAAAAAAGGTATTTTTCCTACCAATTTTTGTAAAGCCTAAGTTTGTGCCTTAAA
66 TTTGGTTTTGC-AAGAAAGG-CTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* *
160654 TGAGACAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTATGCACCAT-ATCACAT
129 TGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* *
160717 TTTCCTCATTAGGATAAATGATTTTGATGA-TTT-TTTTCCATGGAAATCTTTT-TTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * *
160779 TTTCCTTGAAATCGAAGTTCATCCC-TAAAACAAAACAAGCATCGATTCTCATAATAGTCACCAT
258 TTTCCTTGAAATCAAAGTTCATCCCAT-AAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * *
160843 TTTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTGGGAGACATGACATTGATGCTTTGG
322 TCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * *
160908 TGTCGTAAGAAAGCCTTTTCTTCTCACGATTTTTGATACAATCAAGGTTTGTCTTTTAAGAAAGA
386 TGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
* *
160973 CAAACACGAATATTTATACTAATC
450 C-AACACGAATACTCATACTAATC
* * * * * * * *
160997 CCTATTATTTTCAGGATTAAGCACCATAAACGTAGTCTTCTTATTAGGATCCACAATATTGATGG
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
161062 TTTGGTTTTGCAAGAAAGGCTTTTATCCCACAAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
161127 GAAACAAACATGGATTCTAGTAATGATCTTCATTCAATTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
* *
161192 TTCTCATTAGGATAAAAGATATTGATGA-TTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * * **
161255 TCCTTGAAATCAAAGTTCATCCCTTAAACAAGACAAGCATTGATTCTCATAGTAGTCTCCATTCT
260 TCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCT
* * * ** *
161320 TTTCGAGATTGGGAACCAAAAACACGTTCACTTCATTAGGAGACAAGACACAGATGCTTTGGTGC
325 TTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGT
**** *
161385 CGCAAGAAAGCCTTTTCTTCCCTTGGTTTTTGATACAATCAAGGTTTGTCTTTTAAGAAAGACAA
389 CGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-A
*
161450 ACACGAATACTCATATTAATC
452 ACACGAATACTCATACTAATC
* * *
161471 CCAATTCTTTTCAGGATTAGGCACCATAAACATAGTCCTCTTATTAGGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
** * * * *
161536 TTTGGTTTCACAAGAAAGGCTTTCCTCCCACCAATTTTAGTAAAGTCTATGTTCGTGCCTTAAAA
66 TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
161601 GAGACAAACATGGATTCTA-TAAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAAACACAT
130 GAGACAAACATGGATTCTAGT-AATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACAT
* * * *
161664 TCTACTCTTTAGGATAAA-GATATTGATGGTTTTCTTTTCCATGGAAATTTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * * * * * *
161728 TTTCCTTAAAATCAAAGTTAATCCCTTAAATAAGATAAGTATTGATTCTCGTAAAAGTCTCAATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* *
161793 CTTTCCAAGATTGGGAACCAAAA-ATCCCTTCACTTCCTTAGGAGACATGACATTGATGCTTTGG
323 CTTTTCAAGATTGGGAACCAAAACA--CCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * * * *
161857 TGTCACAAGAAAAGCTTTTCTTTCCACCGTTTTTGGTAGAATCAAGGTTTGTCTCTTAAGTAAGA
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
* * *
161922 CAAC-CTGACTAATCATAATAATC
450 CAACAC-GAATACTCATACTAATC
*
161945 CCCATTCTTTTCAAGATTAGGCACCATAAACATAGTCTT-TGCATTAGGATACACGATATTGATG
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCT-CATTAGGATACACGATATTGATG
* * *** * * * *
162009 TTTTAGTTTCATAAGAAAGGCATTTCTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTCAAA
65 CTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* ** *
162074 TGAGACAAACATGGATTCTTA-TAATGATCTTCATTCAATTTACGATTACGCACCAT-AACACAT
129 TGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* *
162137 T-TCCTCATTGGGATAAATGATATTGATGACTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * * *
162201 TTTCCTTGAAATCAAAGTTCATCCCTTAAACAAGACAAGCATTGATTCTCATAATAGCCTTCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * *
162266 CTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTAGGAAACATGACACTGATGCTTTGGT
323 CTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
* * * *** * *
162331 GTCGTAAGAAAGCCTTTTATCCCCATGGTTTTTGATACAATTC-GGGTTTGTCTTTTAAGAAAGA
387 GTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAA-TCAAGGTTTGTCTTTTAAGAAAGA
*
162395 CAAACACGAATACTCATACTAATG
450 C-AACACGAATACTCATACTAATC
* ** * *
162419 CCTATTCTTTTCAGGATTAGGCACCATAAATGTTAGGATCTTGGTTTTGATATAACAAAGGATAG
1 CCCATTCTTTTCAGGATTAGGCACCATAAA-CATA-G-TC----TTCTCAT-T-----AGGATA-
* ** * * ** *** ** * * ** * *
162484 AATAAAATCGGAAATTATTTTGAAAATACCAA-AAATGTG-TTTTATTCAATTAAGTACTTTATA
52 CACGATAT-TG--A-TGCTTTG-GTTTTGCAAGAAA-G-GCTTTT-TCCCACCAA-T-TTTTGTA
* **
162547 AA-T-T---TT-GTACC--AAATGATTTTTGATTCACCAA-ATGTTTTCTAGTTAA-G----T-A
107 AAGTCTAAGTTCGTGCCTTAAATGA-----GA--CA--AACATGGATTCTAG-TAATGATCTTCA
** * ** * * * ** * * *
162597 TAAATGTTT-TCA--AGG--CTTTAAATGATTAATT-T-CTAAGTTAAAATATATCAAAGTATCG
162 TTCAT-TTTGTGATTAGGCACCATAAA-CA--CATTCTCCTCA-TTAGGATAAAT--GA-TATTG
* * * ** ** ** * * ** * ** *
162655 ATACATAGGTATT-TGTATCGATACATTAAGATTGACTTAG-GCTAAAATT-GTCAAAACCCTTA
219 AT-GAT---T-TTCT-TTTCCATGGA--AATCTTTTCTTTGCCCT-ATTTTCCTTGAAA---TCA
* * * * * ** ** **
162717 AATGTATCGAT-ACATGAA-AA-ATATGCATCGA-T-ACATGTCA-T-TGGGATTTCTTGGCAGT
272 AA-GT-TC-ATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCT-CCA-TTCTTTTCA--
* * ** ** * * * * *
162775 AGCTAAACTTGTATCGATACACCAAGTATGTATCGA-TACAATGTATCGATACATCAAAAATTGT
330 AG----A-TTG---GGA-AC-CAAAACACCT-TC-ACTTC-AT-TA-GGAGACAT--GACATTG-
* * * ** * * * ***
162839 ATCGATACATTGGCT-T-GTAACG---GCTATATT-TT-CAAATATGTATCGATA-CATCAAAAA
377 AT-G---CTTTGG-TGTCGCAA-GAAAGCT-T-TTCTTCCCACCAT-TTTTGATAGAATCAAGGT
* ** *** ** *
162896 TTGTATCGATACA-TTTG-C-ACGGGAA-A-TCATTAAAATAAGCTC
433 TTGTCT-TTTA-AGAAAGACAACACGAATACTCA-T--ACTAA--TC
* ** *** * * * * * * * * * *
162938 CAAACAAGCCAATAACGG-CTAGAAACTCCACTAATCA-A-AC-TC-CAAT-GGCTACAACAACA
1 C--CCATTCTTTTCA-GGATTAG--GCACCA-TAAACATAGTCTTCTCATTAGGATAC-ACGATA
* * * ***** *** ****
162997 TTGAAGCCTATAAATAAGAGCTTCCAGTAGCAAAACACAACAAGAGAGAAGTAGAACCAA-GCAA
59 TTGATG-CT-T---T--G-G-TT----TTGC---A-A-GA-AAG-GCTTTTTCCCACCAATTTTT
* ** ** * * ** * * * *
163061 G-AAACATCT-AGCATTCAAAGTTTTCAAA-GA-TCAAA-GTGTTTTATATTTTTCAA-AAGCTT
104 GTAAA-GTCTAAG--TTC-GTGCCTT-AAATGAGACAAACATGGATTCTA---GT-AATGATC-T
** * * **** * * * * ** * ** * * *
163120 TTGTTCATATTGTTATTA-TTTTC-TAAGCTCTTTGTATTTGATTTTGAGCTTAAATTCCCACAA
159 TCATTCATTTTGTGATTAGGCACCATAAACACATTCT-CCTCA--TT-AGGATAAA-T--GATAT
** * *** * * **** * *
163183 ACA-CA-AGCCTAGTT--A-GAGACAAACTTTGT-TTGTAGAAAAATCTTT-GTTGTCATAT-AA
217 TGATGATTTTCT-TTTCCATG-GA-AATCTTT-TCTT-T-GCCCTAT-TTTCCTTG--AAATCAA
* * ** * * * ** * **
163240 GGTT-GT--GGTAAACCTTGAGAGAGAATC-TCTTTGGAACTTGTGGT-ATAGT-TCGCAAAGAG
273 AGTTCATCCCATAAA---T-A-AGACAAGCATC----G-A-TTCTCATAACAGTCTC-C--A-TT
* * * * * * * * * * * *
163299 ATTGT-AAGGTTGGTATCTAAGCCCGTAAAA-A-ATATGAGTT-GTAAGGTTACACCTTTG-CCT
323 CTTTTCAAGATTGG----GAA--CC--AAAACACCT-TCACTTCATTAGG--AGA-C-ATGACAT
* * * *** * * ** * * ** *** *
163359 TAAAGGCAATCAAT-TCG-ATTAGTGAATTGGGTAATCACTCGACAAGGAAGTGTCAAGGAGAGA
375 T-GATGC-TTTGGTGTCGCA--A--GAA--AGCTTTTC-TTC--CCA-CCA-T-T-TTTGATAGA
* * * ** ** ** * **
163422 GGA-CGTAGG--TGCCGTGTTT-GGACCGAACCTCTATAAATATCTTGTGTCA-AGTTTTCC
425 --ATC-AAGGTTTGTC-T-TTTAAGAAAG-ACAAC-ACGAATA-C-----TCATACTAAT-C
* * * * * ** *** * * *
163479 TTCCCTAATCCCTTTTCA-AATTTGTTCA--A-AACCCGAAAATTC-GA-AAAGA-AC-C-A-AT
1 --CCC--AT-TCTTTTCAGGATTAG-GCACCATAAACATAGTCTTCTCATTAGGATACACGATAT
* ** * ** ***** * * * *
163534 TCACCCCCCCTCTTGGTTCGTTACTTGATAA-GCTTTCAATAAACATAGTCTTCTTATTAGGATA
60 TGA----TGCT-TTGGTT--TTGCAAGA-AAGGCTTTTTCCCACCA-A-T-TT-TTGTAAAG-T-
* *** ** * * ** ** * ** *
163598 CATGATA-TT-GATGCTTTGGTTTCG-CAAGA-AAGGCTTTCTTCCCACCAATTTTAGTAAAGTC
111 C-T-A-AGTTCG-TGCCTTAAATGAGACAA-ACATGG-ATTC-T---AGTAATGAT-CTTCATTC
* * * * * * *
163659 TATGTTCGTGCCTTAAAAGAGACAAACATGGATTCTAGA-AGTGATTATCATTCATTTTGTGATT
165 -AT-TTTGTG-ATT---AG-G-C-ACCAT--A----A-ACA--CATTCTC-CTCA-TTAG-GA-T
* *** * *** * ****
163723 AGGCATCG-TAAACA-CATTCTCCTCTTTAGGATAAAGATATTGATGACTTTT-TTCCATGGAAA
208 A--AAT-GATATTGATGATT-T--TCTTTTCCAT--GGA-A---AT--CTTTTCTT---TGCCCT
* * * *
163785 TCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATCCCTTAAATAAGACAAGCTTCGATTC
256 ---------------ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTC
* * * * * *
163850 TCGTAAAAGTCTCTATT-TTTTCCAATATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGACA
306 TCATAACAGTCTCCATTCTTTT-CAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACA
* *
163914 TGACATTGATGCTTTAGG-GTCGCAAGAAATGCTTTTCTTTCCACCATTTTTGATAAAATCAAGG
369 TGACATTGATGCTTT-GGTGTCGCAAGAAA-GCTTTTCTTCCCACCATTTTTGATAGAATCAAGG
* * * * *
163978 TTTGTCTCTTAAGTACAATA-TACATGAATAATCATAAC-AATC
432 TTTGTCTTTTAAG-A-AAGACAACACGAATACTCAT-ACTAATC
** * * *
164020 CCCATTCTTTTCAATATTAGGCACCATAAACAGAGTCTTCACATTAGAATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
164085 TTTGGTTTCGCAAGAATA-GCATTTTTCTCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTTAAA
66 TTTGGTTTTGCAAGAA-AGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* *
164149 TGAGACAAACATGGATTCTTGTAATGATCTTCATTCATTTTGTGATTACGCACCAT-AACACATT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* *
164213 CTCCTCATTAGGATAAGTGATATTGATGATTTTCTTTTTCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * *
164278 TTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTTTCCATTA
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * *
164343 TTTTCCAGATTGGGAACCAAAAACACCTCCACTTCATTAGGAGAC-TGATATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* *
164407 TCGCAAGAGAAGCTTTT-TTCCCCACGATTTTTGATAGAA--AA-------C--TCAAGAAAGAC
388 TCGCAAGA-AAGCTTTTCTT-CCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC
* * * * * *
164460 AAATACTCAAGAAGCT-TTTCT-TTC
451 -AACAC-GAA-TA-CTCATACTAATC
* * * ** * * **
164484 CACCATTTTTTACAAAATCAAAGTTTATTTGTTA-AATAAAACAAACACAATTACTCATACTA--
1 C-CCATTCTTT------TC--AG--GATTAGGCACCAT-AAACATAGTC--TT-CTCAT--TAGG
* * ** ** * ** *
164546 AT-CCCCAT-TCT--T--TTTAGGATTAGGCACCATTAA--CATAGTCTTCA-C-A-TTTTG--A
49 ATACACGATAT-TGATGCTTT-GG-TTTTGCA--AGAAAGGCTTTTTC-CCACCAATTTTTGTAA
* * * ** * * *** * * * * *
164598 TG-C-ACGATATTGATG-CTTCAGTTTCGCAAAAAAACATATTTTTCCCACTAAAT-TTTTGTAA
108 AGTCTAAG-T-TCG-TGCCTT-A-AAT-G-AGACAAACAT-GGATT-CTAGT-AATGATCT-T-C
** * * * ** * * *
164659 AGCCGAAGTTTT-TGCCTTAAATGGAAGAAACATCGATTCTTATAATGTTCTTCATTCATTTTGC
161 ATTC--A-TTTTGTG-ATT--A--G--GCACCAT--AAAC--A-CA--TTC-TC-CTCA-TTAG-
* * * * * * * * * *
164723 GAT-TACGCACCA-TAACAGATTCTCCTCGTTAGGATCAAT-GATATTCATGATTT-TTTTCCAT
205 GATAAATG-A-TATTGA-TGATT-T--TC-TT---TTCCATGGA-AATC-T--TTTCTTTGCCCT
* * * * *
164784 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGCGAGCATC
256 ----A----------------TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATC
* * * * * *
164849 GATTCTCATAACAGTCTCTATTCTTTTCGAGGTTGGGAACCAAAAATACCATCACTTCGTTAGGA
301 GATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGA
* * ***
164914 GACATAATATTGATGCTTTGGTGTCGCAAGAGAAGCTTTTCTTCCCATGGTTTTTGATAGAATCA
365 GACATGACATTGATGCTTTGGTGTCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCA
* * * *
164979 AGGTTTGTCTCTCAAGAAAGACAATCAAGAATACTCATACAAATC
429 AGGTTTGTCTTTTAAGAAAGACAA-CACGAATACTCATACTAATC
* * ** *
165024 CCTATTCTTCTT-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATCCATAATATAGATG
1 CCCATTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * * * * * *
165088 TTTTGGTTTTGTAAGAAAGGCTTTTATCCAACCAATTTTTATAAAATCTAAGTTCGTGTCTCAAA
65 CTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
** * * * *
165153 TGAGACAAACATGGATTCTAGTAATGATCTTCGGTCACTTTGTGGTTA-GTAGCCATAGACACAT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA-CCATAAACACAT
** * * * *
165217 TCTTTTCAGTAGGAAAAATGATATTGATGATTTTCATTTGCATGGAAATCTTTTC--TGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * ** *
165280 TTTCCTTCG-AATCAAAGTTCATCCCTTAAATAAGACAAGCATCAATTCTCGGAACAATCTCCAT
258 TTTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * ** * * * * *
165344 TCTTTT-AAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAGGATACATGATATTGAGGCTTTG
322 TCTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTG
* * * * * * * *
165408 GTGTCACAAGAAAAGCTTTTCTTTCTACCGTTTTTGATAAAATCAAAGTTTAT-TTCCTAA-ATA
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-A
*
165471 AGACAA-AC---T--TGC--ACAAAT-
447 AGACAACACGAATACT-CATACTAATC
** * * * * *
165489 CCCATTCTTTTTTGAATTAGGCACCGTAAACAAAGTCTTCTTATTAGGATACATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
165554 TTTGGTTTCT-TAAGAAAGGCTTTCTTCCCACCAATTTTAGTGAAGTCTAAGTTCATGCCTTAAA
66 TTTGGTTT-TGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* * * *
165618 AGAGACAAACATAGATTCTAGAAATGAT-TATCTTTCATTTTGTGATTAGGCACCATAAACACAT
129 TGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACAT
* *
165682 TCTCCTCATTAGGATAAATGATGTTGATGATTTTCTTTTCCATAGAAATCTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * * * * *
165747 TTTCCCTAAAATCAAAGTTAATCCC-TCAAATAAGACTAGCATCGATTCTCGTAAAAGTTTCAAT
258 TTTCCTTGAAATCAAAGTTCATCCCAT-AAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * * *
165811 TCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGGCATGCCATTGATGCTTTGG
322 TCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * * * *
165876 TGTCGCAAAAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAGGA
386 TGTCGC-AAGAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
* * * *
165941 CATATATGAATAATCATAATAATC
450 CA-ACACGAATACTCATACTAATC
* * * * *
165965 CCCATTCTTTTCAAGATTAGGCACCATAAGCATAGTCTTCACATTAGGATACATGATATTAATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * **
166030 TTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTTTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * **
166095 GAAAGAAACATGGATTCTTA-TAATGATTTTCTTTCATTTTGTGATTACACACCAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * * *
166158 CACCTCGTTAGGATAAATGATATTAACGATTTTCTTTTCCATGGAAATCTTTTCTTTGCACTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * *
166223 TTTCTTAAAATCAAAGTTCATTCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCACCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * * *
166288 TTTTCGAGATTGCGAACCAAAAACACCTCCACTTCATTAGGAGACATGATATTGATGCTTTAGTG
324 TTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* ** * * * *
166353 TCGCAAGAGAAGCTTTTTTTCCCACGGTTTTTTATAGAATCAAGGTTTGTCTCTCAAGAAAGATA
388 TCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGACA
* *
166418 ATTTA-GAATACTCGTACTAATC
452 A--CACGAATACTCATACTAATC
* * * * * * *
166440 CCTATTCTTTTTAGGATTACGCACCATAAACCTAGTCTTCTAATTAGGATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * *
166505 TTTGGTTTTGCAAGAAAGGCATTTTTTCCACCAATTTTT-TATAGAGCCTTACTTCGTACCTCAA
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTA-A-AGTCTAAGTTCGTGCCTTAA
* *
166569 ATGAGACAAACATGGATTCTAAACATTGATTCTAGTGATGATCTTTATTCATTTTGTGATTAGAC
128 ATGAGACAAACATGGATTCT----A--G----TA---ATGATCTTCATTCATTTTGTGATTAGGC
* * * ** *** *
166634 ACCATAAACACGTTCCCCTCATTAGGAAAAATGATATTGACAATTTTCTTTTGTGTGAAAATCTT
180 ACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTT
* * * * * *
166699 TTC--TACCCTATTTTCCTTCAAACCAAAGTTCATCGCATAAAAAAGACAAAG-ATCGATTCTTA
245 TTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGAC-AAGCATCGATTCTCA
* * * * * *
166761 TAACAGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAACGCATTCCCTTCATTCA-GATG-CATG
309 TAACAGTCTCCATTCTTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCATT-AGGA-GACATG
* * * * * * *
166824 ACATTGATGCTTTGGTGTCGTAAGAACAACTTTTCTTTCTACCATTTTTTTACAGAATCAAAGTT
371 ACATTGATGCTTTGGTGTCGCAAGAA-AGCTTTTCTTCCCACCA-TTTTTGATAGAATCAAGGTT
* * * * *
166889 TATCTCTTAA-ATAAGACAAACACAAATACACAGACTAATC
434 TGTCTTTTAAGA-AAGAC-AACACGAATACTCATACTAATC
* * * **
166929 CCCATTCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
166994 TTTAGTTTTGCTAAAAAATGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTTAAA
66 TTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* *
167059 TGAGACAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTACGCACCA-CAACACAT
129 TGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* * * * *
167122 T-TAACTCATTAGGATAAATGACATAGATGA-TTT-TTTTCCATGGAAATCATTTCTTTGCCCCA
193 TCT-CCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
* * * *
167184 TTTTCCTTGAAATCAAAGTCCATCCCTTAAATAAGACAAGCATCGATTCTCATAATAGACTCCAT
257 TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
**
167249 TCTTTTTGAGATTGGGAACCAAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
322 TCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
** * *
167314 TGTCGCAAGAAAGCCTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTATCTTTTAAGAAAGA
386 TGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
* *
167379 CAAACATGAAAACTCATACTAATC
450 C-AACACGAATACTCATACTAATC
** * * * * *
167403 CTTATTCTTTTCAGGATTA-GCACCACAAACATAGTCTTCTTATTAGGATCCACGATATGGTTGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * **
167467 TTTTGTTTTGCAAAAAAGGCTTTTACCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCCCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
167532 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACTATAAACATATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
* * *
167597 TCCTCTTTAGGATAAATGATATTGATGATTCT-TTTTCCGA-GGAAATCCTTTCTTTGCCCTATT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCC-ATGGAAATCTTTTCTTTGCCCTATT
* * * * ** *
167660 TTCCTTAAAATCAAAGTTAATACCTTAAATAAGACAAATATCGATTCTCATAAAAGTCTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * * *
167725 TTTCCAAGATTGGGAACCAAAAACCCCTTCACTTCTTTAGGAGACATGACACTGATGCTTTGTTG
324 TTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* * * *
167790 TCGCAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAAGACA
388 TCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGACA
* * *
167855 TACATGAATAATCATAATAATC
452 -ACACGAATACTCATACTAATC
* *
167877 CCCACTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTAGGATACACATCACATTAGG
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAG---T--C--T----T---C-T--CATTAGG
* * * *
167942 ATACACAATATTGAAGCTTTGGTTCTGCAAGAAAGGCATTTTTCCCACCAATTTTT-TCAAAGCC
49 ATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGT-AAAGTC
* * * * *
168006 TAAGTTTGTGCCTTCAAGGACACAAACATGGATTCTTA-TAATCATCTTCATTCATTTTGTGATT
112 TAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATT
* * *
168070 ACGACACCAT-AACACATTCTCCTCGTTAGAATAAATGATATTGATGATTTTCTTTTCCATGGAA
176 A-GGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* * *
168134 ATCTTTTTTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCTTAAATAGGACAAGCATCGATT
240 ATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATT
* *
168199 CTCATAACAGTCTCCATTCTTTTCGAGATTGGGAACCAAAAACACCTCCACTTCATTAGGAGACA
305 CTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACA
* * * * * *
168264 TGATATCGATGCTTTGGTGCCGCAAGCGAAA-CTTTTCTTCCCTCGATTTTTGATCGAATCAAGG
369 TGACATTGATGCTTTGGTGTCGCAA--GAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGG
*
168328 TTTGTCTCTTAAGAAAGACAAACACGAATACTCATACTAATC
432 TTTGTCTTTTAAGAAAGAC-AACACGAATACTCATACTAATC
* * * * * *
168370 CCTATTCTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * *
168435 TTTGGTTTTACAAGAAAGGCTTTTAT-CCACCCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAA
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCA-CCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* * **
168499 TGAGATAAACATGGATTCTAGTAATGATCTTTATTCATTTTGTGATTAGGTGCCATAAACACATT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
** * *
168564 CTTTTCTTTAGGA-AAATGATATTGATGATTTTCTTTTACATGGAAATCTTTTC--TGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * *
168626 TTCCTTCG-AATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTGTCGTAACAATCTCCATT
259 TTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* ** ** * * * * *
168690 CTTTT-AAGGATTAGGAAGCCAAAATGCAATCATTTCTTTAGGATACAGGACATTGATACTTTGG
323 CTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
*** * * * * * *
168754 TGTCGCAAGAAAAGCTTTTCTTTTTATCGTTTTTGATAAAATCAAAGTTTAT-TTCCTAA-ATAA
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-AA
* ** ** *
168817 GACAA-ACTAGCACGAAATA-AAAT-
448 GACAACACGAATAC-TCATACTAATC
** * * * * ** **
168840 CAAAGTT-TATTTCCTAAATAAGATAAACTTGCACGA-ATCCCATTCTCTT-TCGGATTAGGCAC
1 CCCA-TTCT-TTT-C-----AGGAT-TA--GGCACCATA-AACATAGTCTTCTC--ATTA-G---
* ** *
168902 TGTAAATAAAGTCTTCTTATTAGGATACACGATATTGACGCTTTGGTTTCGCAAGAAAGGCTTTC
48 -G---ATACA--C--GATATT--GAT----GCT-TTG--G---T--TTT-GCAAGAAAGGCTTT-
* *
168967 TTCCCACCAATTTTAGTAAAGTCTAAGTTCGTGCCTTAAAAGAGACAAACATGGATTCTAGTAAT
89 TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAAT
*
169032 GAT-TATCATTCATTTTGTGGTTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATT
154 GATCT-TCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATT
169096 GATGATTTTCTTTTTCGCA---AAATTCTTTTCTTTGCCCTA------TT----T-----TTC-T
218 GATGATTTTC-TTTTC-CATGGAAA-TCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCAT
* * * * *
169142 ----TAAATAAGACAAGTATCGATTCTCGTAAAAGTCTCCATTCTTTCCAAGATTGGGAACTAAA
280 CCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAAC-CAA
* * * * *
169203 AACCCCTTCACTTCCTTAGCAGACATGACATTGATGCTTTGGTGTTGCAAGAAAAGCTTTTCTTT
344 AACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTC
* * * * * * * *
169268 CCATCATTTTTTATAGAATCAAGGTTTGTGTCTTAAGTAAGACATACATGAATAATCATAATAAT
408 CCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGACA-ACACGAATACTCATACTAAT
169333 C
472 C
* * * * * * * *
169334 CCTAGTCTTTTCAAGG-TTAGGTAGCATAAACATAGTCTTCACATTAGGATAAATGATACTGATG
1 CCCATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * * * * * *
169398 CTTTGGTCTCGCAAGAAAGGCATTTTTCCCACCAATGTTTGAAAAG-CTTAAATTTGTGCCTTAT
65 CTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTC-TAAGTTCGTGCCTTAA
* * * *
169462 ATGAGACAAACACGGATTCT--TATATTATCTTCATTCATTTTTTGATTATGCACCAT-AACACA
128 ATGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACA
*
169524 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGATATCTTTTCTTTGCCCTA
192 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
* * * * * *
169589 TTTTCCTTGAAATCGAAGTTCATCCCTTAAATAATATAAGCATCGATTCTCATAGCAGTCTCTAT
257 TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
** * * *
169654 TCTTTTTGAGATTAGGAACCAAAAACACCTCCACTTCATTAGGAGACATGATATTGATGCTTTGG
322 TCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * ** * * * *
169719 GGTCGCAAGCGAAGCTTTTCTTCTCACGGTTTATGATAGAATCAAGGTCTATCTCTTAAGAAAGA
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
*
169784 CAAACAAGAATACTCATACTAATC
450 C-AACACGAATACTCATACTAATC
* * * * * **
169808 CCTATTCTTTTCAGGATTAGGCACCATAAACATTGTCATCTCATTAGAATCCTTGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * * *
169873 TTCGGTTTTGCATGAAAGGCTTTTATCCCACTAATTTTTGTAATGTCCAAGTTCATGTCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
** * * *
169938 GAGACAAACCCGGATTCTAGTAATGATCTTCATTCATTTTGCGATTAGGCACCTTAAATACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
** * * * * *
170003 TTTTCATTAGAAAAAAAAGA-ATTGATGATTTTCTTTTACATGGAAATCTTTTC--TGCCATATT
195 TCCTCATTAG-GATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * *
170065 TTCCTTCG-AATCAAAGTTCATCCCTTAAATAAGATAAGCATCGATTCTCATAACAGTCTCAATT
259 TTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
** ** * *** * * *
170129 CTTTT-AAGGATTAAGAAGCTGAAACGCAAACCCTTCTTTAGGATACATGACATTGATGCTTTGG
323 CTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * * * * * * * *
170193 TGTTGCAAAAAAAGCTTTTCTTTCTACCGTTTTTGATAAAATCAAAGTTTAT-TTCCTAA-ATAT
386 TGTCGC-AAGAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-AA
*
170256 GACAA-AC---T--TGCAT--GAAT-
448 GACAACACGAATACT-CATACTAATC
* * * * * * * *
170273 CCCATTCTTTCCCGGATTAGGCAACGTAAACAAAGTTTTCTCATTAGGGTGCACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
** * * * * *
170338 TTTGGTTTCACAAGAAAAGCTTTCTTCCTACCAATTTTAGCAAAGTCTAAGTTCAG-GCCTTCAA
66 TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTC-GTGCCTTAAA
** ** *
170402 TGAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACTGT-CGCAACT
129 TGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAAC-ACA
** * * * *
170465 TTCTCCTTTTTAGGATAAATGATATTGATGAATTT-TTTTGCATGAAAATCTTTTATTTGCCCTA
192 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
* * * * * *** * * *
170529 TTTTTCGTAAAATCAAAGTTCATCCCTTAAATAAAAGGGGCATCCATTTTCGTAACAGTCTCCAT
257 TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * *
170594 TCTTTTAAAGAATGGGATACTAAAACGGATTCCCTTCCTAAAACGGATTCCCTTCTTTAGGAGAC
322 TCTTTTCAAGATTGGGA-ACCAAAAC--A---CC-T--T----C--A----CTTCATTAGGAGAC
* * * * * * * * * * *
170659 ATG-CTGTTGATGCTTTGGTGTTGTAAGAAAAACTTTTGTTTCTACCATTTTTTATGGAACCAAA
368 ATGAC-ATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAG
* *
170723 GTTTGTC-TTT-A-AAAGACAAACATGAATACTCATACTAGTC
431 GTTTGTCTTTTAAGAAAGAC-AACACGAATACTCATACTAATC
* ** * * ** *
170763 CCTATTCTTTTTGGGACTAGGTACCATATGCATAGTCTTCTCATTAGGATACACGATATTAATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* *
170828 TTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCCTTAA
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAAGTCTAAGTTCGTGCCTTAA
*
170893 ATGAGACAAACATGG-TTCTAGTAATGATCTTCATTCATTTTGGGATTAGGCACCATAAACACAT
128 ATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* * * *
170957 TC-CCTTTATTAGGA-AAAGTGATATTGATGATTTTCTTTTTCGTGTAAATCTTTTC--TGCCCT
193 TCTCC-TCATTAGGATAAA-TGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * * * * *
171018 ATTTTCCTTCAAAACAAAGTTCATCCCATAAATAAGACAAGGACCTATTC-CTATAACAGTCACC
256 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTC-ATAACAGTCTCC
* ** * ** * *
171082 ATTCTTTTGAAGATTAAGAAGCTAAAATGCATTCCCTTCATTAGGATG-CATGACATTGATGCTT
320 ATTCTTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCATTAGGA-GACATGACATTGATGCTT
** * * * * * * * *
171146 TGGCATCGCAAGAAAAGCTTTTCTTTCCACTATTTTTTACAGAATTAAAGTTTATCTCTTAA-AT
383 TGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-
* *
171210 AAGGCAAACACAAATACTCATACTAATC
446 AAGAC-AACACGAATACTCATACTAATC
* * * * **
171238 CCCAATCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATTTTGAT-CTACGATATTGATG
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATAC-ACGATATTGATG
* ** * * * * * *
171302 CTTTAGTTTCCCAAAAAAAGGCATTTTTCGCACCAATTTTTGTCAAGCCTAAGTTTGTGCCCTAA
65 CTTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAA
* *
171367 ATGAGACAAACATGGATTCTTA-TATTGATCTTCATTCATTTTGTGATTACGCACCAT-AACACA
128 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACA
* * * * *
171430 TTTTCCTCTTTAGGATAAAGGATATTGATGATTTATTTTTTCCATGGAAATCTTTTCTTTGTCCT
192 TTCTCCTCATTAGGATAAATGATATTGATGATTT-TCTTTTCCATGGAAATCTTTTCTTTGCCCT
* * * * *
171495 ATTTTCCTTGAAATCAAACTTCATCCCTTAAACAAGACAAGTATCGATTCTCATAATAGTCTCCA
256 ATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCA
* * * * *
171560 TTCTTTTCGAGAATGGGAACCAAAAACACCTTCACTACATTAGAAAACATGACATTGATGCTTTG
321 TTCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTG
*** * * * *
171625 GTGTCGCAAGAAAGCCTTTTCTTCCCATGGTTTTTAATACAATCAAGGCTTGTCTTCTAAGAAAG
385 GTGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAG
* * *
171690 AAAAACACAAATACTCATCCTAATC
449 -ACAACACGAATACTCATACTAATC
* * * * *
171715 CCTATTCTTTTCAGGATTAGGTACCATAAACATAGTCTTCTTATTAGGATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* *
171780 TTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAGTCTAAGTTTGTGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
171845 GAGACAAACATGGATTCTAGTAATGATCTTCATTTATTTTGTGATTAGGCACCATGAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
* *
171910 TCCTTATTAGGATAAATGATATTGATGATTTTC--TTCTATGGAAATCTTTTCTTTGCCCTATTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * *
171973 TCCTTGAAATCAAAGTTCAT-CCTTCAAATAAGACAAGCATCGATTCTCATAATAGTCTCCATTT
260 TCCTTGAAATCAAAGTTCATCCCAT-AAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * ** * *
172037 TTTTCGATATTGGGAACCAAAAACACCTTCTTTTGATTAGGAAACATGACATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
** *
172102 TCGCAAGAAAGCTTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTGTCTTTTAAGAAAGACA
388 TCGCAAGAAAGC-TTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
*
172167 AACACGAATACTCATACTAAAC
451 AACACGAATACTCATACTAATC
* *
172189 CCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTAGGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * * * *
172254 TTTGATTTAGCAATAAAGGATTTCTTCCCACTAATTTTAGTAAAGTCTAAGTTCATGCTTTAAAA
66 TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
172319 AAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCTTAAACACATT
130 GAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACATT
*
172383 CTCCTCATTAGGATAAATGATATTGATAATTTT-TTTTCCATGGAAATCTTTTCTTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * * * * *
172447 TTCCTTAAAATCGAAGCTAATCCCTTAAATAAGACAGGCATCAATTCTCTTAA-ATGTCTCCATT
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACA-GTCTCCATT
* * * *
172511 ATTTCCAAGATTGGGAACCAAAA-ACCCTTCACTTCCTTAGGAGACATGACGTTGATGCTTTGGT
323 CTTTTCAAGATTGGGAACCAAAACA-CCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
* * * * * * * *
172575 GTCGCAAGAAAAGCTTTTCTTTCTACCGTTTTTAATAAAATCAAGGTCTAT-TTCCTAA-ATAAG
387 GTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-AAG
*
172638 ACAA-AC---T--TGC--ACGAAT-
449 ACAACACGAATACT-CATACTAATC
** * * * *
172654 CTTATTCGTTTTC-GGATTAGGCACCGTAAACAAAGTCTTCTCATTTGGATACATGATATTGATG
1 CCCATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * * *
172718 CTTTTGGTTTTGCAACAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTTTAAGTTCGTCCCTTAA
65 C-TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAA
* * * * *
172783 ATGAGACAAAAATAGATTCTAGTAATGAT-TATCATTCATTTTGTGATTAGGCACCGTAATCACT
128 ATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACA
* ** * * * *
172847 TTCTCTTTTTTAGGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGCCTTA
192 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
* * * *** * * * *
172912 TTTTCCTTAAAATCAAAGTTCATCCCCTAAATAAAAGGGGCATCTATTCTCGTAATAATCTCCAT
257 TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * ** * * * *
172977 TCTTTTAAAGAATGGGATGC-TAACACGCATTCCCTTCTTTAGGAGACATG-CTGTTGATGCTTT
322 TCTTTTCAAGATTGGGAACCAAAACAC-C-TTCACTTCATTAGGAGACATGAC-ATTGATGCTTT
* * * * * * * * *
173040 GGTGTTGTAAGAAAAACTTTTGTTTCTACCATTTTT-AGTAGAACCAAAGTTTGTC-TCT-A-AA
384 GGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGA-TAGAATCAAGGTTTGTCTTTTAAGAA
*
173101 AGA-AAAACTTGAATACTCATACTAATC
447 AGACAACAC--GAATACTCATACTAATC
* ** * * *
173128 CCCATTCTCTTTC-GGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACACAATGTTAATG
1 CCCATTCT-TTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
* * *
173192 CTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCCTCA
65 CTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAAGTCTAAGTTCGTGCCTTA
* *
173257 AATTAGACAAACATGGATTCTAAACAAGGATTCTAGTAATGATCTTTATTCATTTTGTGATTAGG
127 AA-T-G------A--GA--C-AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* *** *
173322 CACCATAAACACATTC-CCTTTATTAGGA-AAAGTGATATTGATGATTTTCTTTTGTGTGAAAAT
179 CACCATAAACACATTCTCC-TCATTAGGATAAA-TGATATTGATGATTTTCTTTTCCATGGAAAT
* * * * * * *
173385 CATTTC--TGCCCTATTTTCCTTCAAACCGAAGTTCATCCCATAAATAAGGCAAGGATCGAATC-
242 CTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCT
* ** * * * * *
173447 CTATAACAGT-TGCCATTCTTTTGAAGATTAAGAAGCTAAAACGCATTCCCTTCGTTAGGATG-C
307 C-ATAACAGTCT-CCATTCTTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCATTAGGA-GAC
* * * * *
173510 ATGACATTGATGCTTTAGG-GTTGCAAGAAAAGCTTTTCTTTCCACCATTTTTTACAGAATCAAA
368 ATGACATTGATGCTTT-GGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAG
* * *
173574 GTTTATCTCTTAA-ATAAGACAAACACAAATACTCATACTAATC
431 GTTTGTCTTTTAAGA-AAGAC-AACACGAATACTCATACTAATC
* * * *** * *
173617 CCCATTCTTTTTAGGATTAGGCACCATCAACATAGTCTTCACATTTTAATACACGACATT-AAGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
** * * ** * * ** *
173681 TTTTAATTTCGCAAAAAAAAACATTTTTCACACCAATTTTTGTAAAGCCTAAGTTTATGCCTCAA
66 -TTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAA
* **
173746 ATGAGGCAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTACACACCAT-AACACA
128 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACA
* * ** * *
173809 TTTTTCTCATCGGGATAAAAGATATTGATGATTTT-TTTTCCATGGAAATCTTTTCTTTGCTCTA
192 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
* * * * * *
173873 TTTTCCTTGAAATCAAAGTTCATCCAACAAACAAGACAAGCATCGATTCTTATAATAGCCTCCAT
257 TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* *
173938 TCTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTTGGAGACATGACATTGATGCTTTGG
322 TCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* ** * *
174003 TGTCGAAAGAAAGCCTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGAAAGA
386 TGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
174068 CAAACACGAATACTCATACTAA-C
450 C-AACACGAATACTCATACTAATC
* * * * * *
174091 CCCTATTCCTTTCAGGATTAGGCAGCATAAACGTAGTCTTCTTATTAGGATCCATGATATTGATG
1 CCC-ATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
** * * * * * * * *
174156 CTTTGGATTTT-CAAGAACACTCATAGTATT--C-TCTATACTTT-TCAGGAT-T-AG-AC--AC
65 CTTTGG-TTTTGCAAGAA-AGGC-T--TTTTCCCACCAAT-TTTTGTAAAG-TCTAAGTTCGTGC
* * *** * * * ** **
174211 CATAAACAT-AGTCTTCTCTTTAGGA-TCCATGATATTGATGC-T--TTGGTTTTGTGAGAAAGG
123 C-TTAA-ATGAGAC-AAAC-AT-GGATTCTA-G-TAATGAT-CTTCATTCATTTTGTGA-TTAGG
* *** * * * * * * ***
174271 CTTTTATCCCATCAA-TTTTTGTAAAGTCTAAGTTCGTGTCTCAAATGAGACAAACGTGGA--TT
179 C----A--CCATAAACACATTCT----CCTCA-TTAG-G-AT-AAATGATATTGA--T-GATTTT
** *** **** * * * **
174333 CTAGT--A-GTG--ATCTTCATTCATTTTGTGATTAGGCACCAT-AAA-CACA-TTCTTTTCATT
227 CTTTTCCATG-GAAATCTT--TTC--TTTG-CCCTATTTTCCTTGAAATCAAAGTTCATCCCA-T
* * * ** * *
174390 AGAAAAAATGATATTG-AT-GATTTTCTTTTGCATGGAAATCTTTTCTTCCCTT-TTTTC---CT
285 --AAATAA-GACA-AGCATCGA--TTC---T-CAT---AA-C-AGTC-TCCATTCTTTTCAAGAT
* * * * * * * * *
174449 T-CGAATCAAAGTTCATCCCTT-AATTAAGATAAGCATCGATTC-TCGTAACAGTCTCCATTCTT
334 TGGGAACCAAA--ACA--CCTTCACTT--CATTAGGA--GA--CAT-G--ACA-T-T-GATGC-T
* * * ** *
174511 TTAAGGAT-TAGGAAGCAAAAACGCTATCCCTTCTTTAGGATACATGACATTGATGCTTTTGTGT
382 TT--GG-TGTCGCAAG---AAA-GCT-T---TTC--T----T-C---CCA-CCAT--TTTTG-AT
* ** * * * * * * ** * * *
174575 CACAAGAAAAGCTTT-TCTTTCTACCGTTTTTAATAAAATCAAAGTTTA-T-TTCCTAAATAA
422 -AGAA-TCAAGGTTTGTCTTT-TA-AG----AAAGACAA-C-ACGAATACTCATACT-AAT-C
** ** * * ** * *
174635 GACAAAC-TTGCATGAATCCTATTCTTTTCCGGATTAGGCACCGTAAACAAAGTCTTCTCATTAG
1 CCCATTCTTTTCA-GGAT--TAGGC---------------ACCATAAACATAGTCTTCTCATTAG
* * ** *
174699 GATACATGGTATTGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTC
48 GATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTC
* * *
174764 TAAGTTCGTGCCTTAAATAAGACAAACATGGATTCTAGTAATGAAT-ATCATTTATTTTGTGATT
112 TAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATG-ATCTTCATTCATTTTGTGATT
* * * * * ** * * *
174828 AGCCACCGTAACCACTTTCTCTTTTTTAGGATAAATGATATTGATCATTTTCTTTTGCATGAAAA
176 AGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAA
* * * * * * * * *
174893 TCATTTATTTGCCCTATTTTCCCTAAAATCAAAGTCCATCTCTTAAATAA-A-AGGGACATCCAT
241 TCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACA-AG-CATCGAT
* * * * * * * ** * *
174956 TCTCGTAACAGCCTCTATTCTTTTAAAGAATGGGATGCTAAAATGCATTC-CTTTCTTTAGGAGA
304 TCTCATAACAGTCTCCATTCTTTTCAAGATTGGGA-ACCAAAACACCTTCAC-TTCATTAGGAGA
* *** * * * * * * * * * *
175020 GATGTTGTTGATGCTTTGGTGTTGTAAGAAAAACTTTTGTTTCTACCATTTTTTAAAGAACCAAA
367 CATGACATTGATGCTTTGGTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAG
* * *
175085 GTTTGTC-TCTAA-AATG-CAAACATGAATACTCATACTAATC
431 GTTTGTCTTTTAAGAAAGAC-AACACGAATACTCATACTAATC
** * * * **
175125 CCCATT-TTTTTTGGATGAGGTAACATATGCATAGTCTTCTCATTAGGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * *
175189 TTTGGTATTACAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAAGCCTAACTTCGTGCCTCAA
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAAGTCTAAGTTCGTGCCTTAA
*
175254 ATGAGACCAACATGGATTCCAAACATGGATCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA
128 ATGAGACAAACATGG---------AT---TCTAGTAATGATCTTCATTCATTTTGTGATTAGGCA
* * * * *
175319 CCATAAACACATTCCCCTCATTAGGAAAAATGATGTTGATGATTTTCTTTTGCGTGGAAATCTTT
181 CCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTT
* * * *
175384 TC--TGCCCTATTTTCCTTCAAACCAAAGTTCATCCCTTAAATAAGACAAAG-ATCGATTCTTAT
246 TCTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGAC-AAGCATCGATTCTCAT
* * * * *
175446 AACAGTCTCCATTCTTTT-AATGATTGAGAAGCTAAAACGCGTTTC-CTTTATTAGGATG-CATG
310 AACAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAACAC-CTTCACTTCATTAGGA-GACATG
* * * * * * * *
175508 ACATTGATGCTTTGGTGTCACAACAAAAGCTTTTCTTTCCACCATTTTTTACAAAATGAAAGTTT
371 ACATTGATGCTTTGGTGTCGCAA-GAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTT
* * *
175573 ATCTCTTAA-ATAAGACAAACACAAATACTCATACTAATC
435 GTCTTTTAAGA-AAGAC-AACACGAATACTCATACTAATC
* * * ** *
175612 CCCATTCTTTTTAGGATTAGCCACCATAAACATAGTCTTCACATTTTGATACACAATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * * *
175677 TTTAGTATTCCAAAAAAAGGCATTTTTCCCACCAATTTTTTTAAAGCCTAAGTTTGTGCCTTGAA
66 TTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* * *
175742 TGAGACAAACATGGATTCT--TATATGATCTCCATTTATTTTGTGATTATGCACCAT-AACACAT
129 TGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACAT
* **
175804 TTTCCTTTTTAGGATAAATGATATTGATGA-TTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * * *
175868 TTTCCTTGAAATCGAAGTTCATCCCTTAAACAAGACAAGCATCAATCCTCATGACAGTCTCCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
** * * * *
175933 CTTTTTGAGATTGGGAACCAGAAATACCTTCATTTCGTTAGGAGACATGATATTGATGCTTTGGT
323 CTTTTCAAGATTGGGAACCA-AAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
*** * *
175998 GTCGCAAGAAAAGCTTTTCTTCCCATGGTTTTTGATAGAATCAGGGTTTGTCTCTTAAGAAAGAC
387 GTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC
* *
176063 AATCAAGGATACTCATACTAATC
451 AA-CACGAATACTCATACTAATC
* * * *
176086 CCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTATGATCCATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* *
176151 TTTGGTTTTGCAAGAAAGGCTTTTGTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGTCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * *
176216 GAGAAAAACATGGATTCTAGTAATGATCTTCAGTCATTTTAG-GATTAGGCACCATAAACATATT
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT-GTGATTAGGCACCATAAACACATT
** * * * * * *
176280 CTTTTCAATAGGAAAAATTATATTGAGGATTTTCTTTTGCATGGAAA---TTT-TTTGTCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * * *
176341 TTTCTTCG-AATCAAATTTCATCCCTTAAATAAGACAGGCATCGATTCTCATAATAGTCCCCATT
259 TTCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * ** * * * *
176405 -TTTTTAAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAGGATAGATGACATTGATGCTTTGG
323 CTTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
* * * * * * * * *
176469 TGTCGCAAAAAAAGGTTTTCTTTCTACCGTGTTTGATAAAATCAAAGTTTGT-TTCCTAA-ATAA
386 TGTCGC-AAGAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGA-AA
*
176532 GACAA-AC---T--TGCAT--GAAT-
448 GACAACACGAATACT-CATACTAATC
* * * * * *
176549 CCTATTCTTTTCTGGATTAGGCATCATAAACAAAGTCTTCTCATTAAGATACATGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* *
176614 TTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAG-TCTGTGCCTTAAA
66 TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTC-GTGCCTTAAA
* * * * *
176678 TGAGACAAATATGGATTCTAGTACT-AT-TATCATTCATTTTGTGATTAGGCACCGTAACCACTT
129 TGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACAT
** * * * * * * *
176741 TCTCCTTTTTAGGATAAATGATACTGATCATTTTCTTTTGCACGAAAATATTTTATTTGCCCTAT
193 TCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTAT
* * * * *** *
176806 TTTCCTTAAAATCAAAGTTCATCTCTTAAATAAAAGGGGCATCCATTCTCATAACAGTCTCCATT
258 TTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * * * * * * *
176871 CTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTAGGAGGCATG-CTATTGATGCTTTGG
323 CTTTTCAAGATTGGGA-ACCAAAACACCTTCACTTCATTAGGAGACATGAC-ATTGATGCTTTGG
* * * * * * * * ** * *
176935 TGTCGTAAGAAAAACTTTTGTTTCTACCATTTTTTATAGAACCAAAGTTTGTC-CCT-A-AACGG
386 TGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
*
176997 CAAACATGAATACTCATACTAATC
450 C-AACACGAATACTCATACTAATC
** * ** * *
177021 CCCATTCTTTTTTGGATTAGGTACCATATGCATAGTCTTCTCATTAGGATACACAAAATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * *
177086 TCTAGTTTTGCAAGAAAGACATTTTTCCCACCATTTTTTTGTAAAGCCTAACTTCGTGCCTTAAA
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCA-ATTTTTGTAAAGTCTAAGTTCGTGCCTTAAA
* *
177151 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTCTGATTAGGCACCATAAACACACT
129 TGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * * * *
177216 CCCCTCATTAGGAAAAATGAAATTGATGATTTTCTTTTGCGTGAAAATCTTTTC--TGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * *
177279 TTCCTTCAAA-CTAAAGTTCATCCCTTAAATAAGACAAGGATCGATTCTTATAACAGTCTCCATT
259 TTCCTTGAAATC-AAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * ** * * *
177343 CTTTTGAAGATTGAGAAGCTAAAATGCATTCCCTTCATTAGGATG-CGT-ACATT-ATTGCTTTG
323 CTTTTCAAGATTGGGAA-CCAAAACACCTTCACTTCATTAGGA-GACATGACATTGA-TGCTTTG
* * * * * *
177405 GTGTCGCAAGAAAAGCTTTTCTTTCCACCATTTTTTACAGAATCAATGTTTATCTCTTAA-ATAA
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGA-AA
* *
177469 GATAAACACAAATACTCATACTAATC
448 GA-CAACACGAATACTCATACTAATC
* * * * **
177495 CCCATTCTTTTTAGGATCAGGCACCATTAACATAGTCTTCACATTTTGATACACGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * * *
177560 TTTAGTTTGGCAAAAAGAGGGATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTCCCTTTAA
66 TTTGGTTTTGCAAGAA-A-GGCTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCC-TTAA
* * *
177625 A-GAGACAATCATGGATTCTTA-TAATGATCTTCATTCATTTTGTGATTATGCACCAT-AATACA
128 ATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACA
* * * * *
177687 TTTTCCTCATTAGGATAAATGATACTGATGA--TT-TTTTCCATAGAAATTTTTTTTTTGCCCTA
192 TTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTA
** * * * * *
177749 TTTTCCTTGAAATTGAAGTTCATCCCTTAAACAAGACAAGCATCGATTCTTATTATAGTCTCCAT
257 TTTTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCAT
* * * *
177814 TCTTTTCGAGATTGGGATCCAAAAACACCTTCACCTCATTAGGAGACTTGACATTGATGCTTTGG
322 TCTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGG
** * * * *
177879 TGTCGCAAGAAAGCCTTTTCTTCCCACGGTTTTTGATACATTCAAGGTTTGTCTCTTAAGAACGA
386 TGTCGCAAGAAAG-CTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGA
* *
177944 CAAACAAGAATACTGC-TACAAATC
450 C-AACACGAATACT-CATACTAATC
* * * * * **
177968 CCTATTCTTTTCAAGATTAGGCACCACAAACATAGTCTTCTTATTAGGATACATGATATTGACAC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* *
178033 TTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAGTCTAAGTTCATGCCTCAAAT
66 TTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * *
178098 GAGACAAACATGGGTTTTAGTAATGATCTACACTCATTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
* * * *
178163 TCCTCATTAAGATAAATGATATTTATGATTTTCTTTTCCATGAAAATCTTTTCTTTGCCCTATCT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * * * * *
178228 TCCTT-AACCTCAAAGTTAATCTCC-TAAACAAGACAAGCATCGATTCTCGTAAAAGTCTCTATT
260 TCCTTGAA-ATCAAAGTTCATC-CCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATT
* * * *
178291 C-CTTCTAGATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGACATGACATTGATGCTTTGGT
323 CTTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
* * * * * * *
178355 GTGGCAAGAAAAGCTTTTCTTTCCGCCGTTTTTGATAGAATCAAGGTTTGCCTCTTAAGTAAGAC
387 GTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC
* * * *
178420 GTACATGAATAATCATAATAATC
451 -AACACGAATACTCATACTAATC
** * * * *
178443 TTCATTCTTTTTAAGATTAGGCACCATAAAC--AGTCTTCACATTAGGATACACGGTATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * *
178506 TTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGCCTAAGTTTGTGCCTTGAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* *
178571 GAGACAAACATGGATTCTTA-TAATGATCTTCATTTATTTTGTGATTACGCACCAT-AACACATT
130 GAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATT
* * * **
178634 CTCCTCAATAGGATAAATGATATTCATAATTTTCTTTTCCATGGAAATCTTTTCTTTGCTTTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * * *
178699 TTCCTTGAAATTAAAGTTCATCCCTTAAATAAGACAAACATCGATTCTCATAATAGACTCCATTC
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * * * *
178764 TTTTCGAGATTGGGAACCAAAAAAACATTCACTTTATTAGGAAACATGATATTGATGCTTTGGTG
324 TTTTCAAGATTGGGAACC-AAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTG
* * *
178829 TCGTAAGAGAAGCTTTTCTTCCCACGATTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACA
388 TCGCAAGA-AAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGAC-
* * *
178894 AACAAGAATACTCCTACAAATC
451 AACACGAATACTCATACTAATC
* * * *
178916 CCTATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATTAGGATCCAAGATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
* * * * * *
178981 TTTGGTTTTGCAAGAAAGG-TTTTTATCCACCAATTTTTGTAAAGTATAAGTTCATGTCTCAAAA
66 TTTGGTTTTGCAAGAAAGGCTTTTT-CCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
*
179045 GAGACAAACATGGATTCTAGTAATGATCTTCATTCGTTTTGTGATTAGGCACCATAAACACATTC
130 GAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTC
** * * * * * *
179110 TTTTCATTAGGAAAAATGATATTAATGATTTTCTTTTGCGTGGAAATCTTTTC--TGCTCTGTTT
195 TCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTT
* * *
179173 TCCTTCG-AATCAAAGTTTATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCTATTC
260 TCCTT-GAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * ** * * * *
179237 TTCT-AAGGATTAGGAAGCCAAAACGCAATCCCTTCTTTAAGATACATGACATTGATGCTTTGGT
324 TTTTCAA-GATTGGGAA-CCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGT
* * ** * * * * * *
179301 GTCGCAAGAAAAGCTTTTCTTTCTACTGTTTTTGATAAAATCAATGTTTAT-TTCCTAAAAAAGG
387 GTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTT-TTAAGAAAGA
*
179365 CAA-AC---T--TGCAT--GAAT-
450 CAACACGAATACT-CATACTAATC
* * * ** *
179380 CCCATTTTTTTC-GAATTAGGCACCATAAACAAAGTCTTCTTTTTAGGATACACAATATTGATGC
1 CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
** * *
179444 TTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTAGTAAAATCTAAGTTCGTGCCTTAAAT
66 TTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAAT
* * * * * *
179509 GAGGCAAACATGGATTGTAGTAATGAT-TATCTTTCATTTTGTGACTAGGCACCATAACCACTTT
130 GAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACATT
** * * * *
179573 CTCCTTTTTAAGATAAATGATATTGATGATTTTCTTTTGCATGAAAATCTTTTATTTGCCCTATT
194 CTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATT
* * * *
179638 TTCCTTAAAATCAAAGTTCATCCCTTAAATAA-A-AAGGGCATCCATTCTCATAACAGTCTCCAA
259 TTCCTTGAAATCAAAGTTCATCCCATAAATAAGACAA--GCATCGATTCTCATAACAGTCTCCAT
* * * * ** * * * ***
179701 TCTTTTAAAGAATGGGATGCTAAAATGCATTC-CTTTCTTTAGGAGACACGTTGTTGATGCTTTG
322 TCTTTTCAAGATTGGGA-ACCAAAACACCTTCAC-TTCATTAGGAGACATGACATTGATGCTTTG
* * * * * * * * * **
179765 GTGTCGTAAGAAAAACTTTTGTTTCTACCATTTTTTATAAAACCAAAGTTTGTC-TCCAA-AATA
385 GTGTCGCAAG-AAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAA-A
* *
179828 GGACAAATATGAATACTCATAC-AATC
448 -GAC-AACACGAATACTCATACTAATC
* * * * ** * *
179854 TCTATTCTTTTTC-GGATTATGTACCATATGCATAGTCTTCTTATTAGGATACATGATATTGATG
1 CCCATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATG
** ** * *
179918 CTTTGGTTTTGCAAGAAACACATTTTTCCCACCAATTTTTTTGTAAACCCTAACTTCGTGCCTCA
65 CTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAAGTCTAAGTTCGTGCCTTA
* *
179983 AACGAGACAAACACGGATTCTAAACATGGATTCTAGTAATGAACTTCATTCATTTTGTGATTAGG
127 AA--TG------A--GA--C-AAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGG
* * * * * *
180048 CACCATAAACACATTCCCCTCATTAGGAAAAATTATATTGATGACTTTCTTTTGCGTGGAAATCT
179 CACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCT
180113 TTTCTTT
244 TTTCTTT
180120 TGAAGATTGA
Statistics
Matches: 25513, Mismatches: 4758, Indels: 3222
0.76 0.14 0.10
Matches are distributed among these distances:
452 2 0.00
453 5 0.00
454 60 0.00
455 30 0.00
456 61 0.00
457 4 0.00
459 1 0.00
460 2 0.00
461 5 0.00
462 69 0.00
463 216 0.01
464 763 0.03
465 704 0.03
466 676 0.03
467 857 0.03
468 116 0.00
469 20 0.00
470 33 0.00
471 281 0.01
472 2441 0.10
473 4471 0.18
474 3954 0.15
475 3261 0.13
476 2768 0.11
477 430 0.02
478 21 0.00
479 7 0.00
480 25 0.00
481 20 0.00
482 11 0.00
483 15 0.00
484 221 0.01
485 22 0.00
486 239 0.01
487 107 0.00
488 343 0.01
489 297 0.01
490 395 0.02
491 234 0.01
492 240 0.01
493 289 0.01
494 20 0.00
495 25 0.00
496 11 0.00
497 12 0.00
498 27 0.00
499 27 0.00
500 46 0.00
501 9 0.00
502 36 0.00
503 16 0.00
504 16 0.00
505 15 0.00
506 22 0.00
507 21 0.00
508 128 0.01
509 43 0.00
510 15 0.00
511 18 0.00
512 10 0.00
513 7 0.00
514 16 0.00
515 13 0.00
516 10 0.00
517 36 0.00
518 21 0.00
519 27 0.00
520 22 0.00
521 27 0.00
522 25 0.00
523 31 0.00
524 29 0.00
525 20 0.00
526 29 0.00
527 26 0.00
528 21 0.00
529 126 0.00
530 94 0.00
531 38 0.00
532 30 0.00
533 21 0.00
534 27 0.00
535 18 0.00
536 37 0.00
537 18 0.00
538 20 0.00
539 39 0.00
540 21 0.00
541 31 0.00
542 19 0.00
543 20 0.00
544 9 0.00
545 19 0.00
546 16 0.00
547 24 0.00
548 13 0.00
549 11 0.00
550 10 0.00
551 12 0.00
552 10 0.00
553 3 0.00
554 6 0.00
555 7 0.00
556 7 0.00
557 5 0.00
558 4 0.00
559 16 0.00
560 71 0.00
561 22 0.00
562 13 0.00
563 20 0.00
564 8 0.00
565 2 0.00
567 3 0.00
569 7 0.00
570 5 0.00
571 5 0.00
572 3 0.00
575 6 0.00
576 6 0.00
577 9 0.00
578 5 0.00
580 4 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (472 bp):
CCCATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAGGATACACGATATTGATGC
TTTGGTTTTGCAAGAAAGGCTTTTTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATG
AGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAGGCACCATAAACACATTCT
CCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTT
CCTTGAAATCAAAGTTCATCCCATAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTT
TTCAAGATTGGGAACCAAAACACCTTCACTTCATTAGGAGACATGACATTGATGCTTTGGTGTCG
CAAGAAAGCTTTTCTTCCCACCATTTTTGATAGAATCAAGGTTTGTCTTTTAAGAAAGACAACAC
GAATACTCATACTAATC
Found at i:162820 original size:13 final size:13
Alignment explanation
Indices: 162802--162827 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
162792 TACACCAAGT
162802 ATGTATCGATACA
1 ATGTATCGATACA
162815 ATGTATCGATACA
1 ATGTATCGATACA
162828 TCAAAAATTG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.38, C:0.15, G:0.15, T:0.31
Consensus pattern (13 bp):
ATGTATCGATACA
Found at i:162825 original size:32 final size:33
Alignment explanation
Indices: 162784--162847 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 33
162774 TAGCTAAACT
**
162784 TGTATCGATACACCAAGTA-TGTATCGATACAA
1 TGTATCGATACACCAAAAATTGTATCGATACAA
*
162816 TGTATCGATACATCAAAAATTGTATCGATACA
1 TGTATCGATACACCAAAAATTGTATCGATACA
162848 TTGGCTTGTA
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
32 16 0.57
33 12 0.43
ACGTcount: A:0.39, C:0.17, G:0.14, T:0.30
Consensus pattern (33 bp):
TGTATCGATACACCAAAAATTGTATCGATACAA
Found at i:167773 original size:474 final size:474
Alignment explanation
Indices: 164467--180119 Score: 12591
Period size: 474 Copynumber: 32.7 Consensus size: 474
164457 GACAAATACT
* * * * * * * * *
164467 CAAG-AAGCTTTTCTTTCCACCATTTTTTACAAAATCAAAGTTTATTTGTTAA-ATAAAACAAAC
1 CAAGAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAAC
* * * * *
164530 A-CAATTACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATT
65 ATGAA-TACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
** * ** * ** *
164594 TTGATGCACGATATTGATGCTTCAGTTTCGCAA-AAAAACATATTTTTCCCACTAAATTTTTGTA
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC---TTTTTCCCAC-CAATTTTTGTA
* * ** * * *
164658 AAGCCGAAGTTTTTGCCTTAAATG-GAAGAAACATCGATTCTTA-TAATGTTCTTCATTCATTTT
190 AAGTCTAAGTTCGTGCCTTAAATGAG-ACAAACATGGATTC-TAGTAATGATCTTCATTCATTTT
* * * * * *
164721 GCGATTACGCACCAT-AACAGATTCTCCTCGTTAGGATCAATGATATTCATGA-TTT-TTTTCCA
253 GTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCA
* * *
164783 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAGTAAGGCGAGCAT
318 TGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCAT
* * * ** * *
164848 CGATTCTCATAACAGTCTCTATTCTTTTCGAGGTTGGGAACCAAAAATACCATCACTTCGTTAGG
383 CGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGG
* *
164913 AGACATAATATTGATGCTTTGGTGTCG
448 AGACATGACATTGATGCTTTGGTGTCG
* ** * *
164940 CAAGAGAAGCTTTTCTTCCCATGGTTTTTGATAGAATCAAGGTTTGTCTCTCAAGAAAGACAATC
1 CAAGA-AAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* *
165005 AAGAATACTCATACAAATCCCTATTCTTCTT-AGGATTAGGCACCATAAACATAGTCTTCTCATT
65 ATGAATACTCATACTAATCCCTATTCTT-TTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* ** * * * * * *
165069 AGGATCCATAATATAGATGTTTTGGTTTTGTAAGAAAGGCTTTTATCCAACCAATTTTTATAAAA
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG
* * ** * *
165134 TCTAAGTTCGTGTCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCGGTCACTTTGTGGT
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
* * ** * * * *
165199 TA-GTAGCCATAGACACATTCTTTTCAGTAGGAAAAATGATATTGATGATTTTCATTTGCATGGA
258 TAGGCA-CCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGA
** *
165263 AATCTTTTC--TGCCCTATTTTCCTTCGAATCAAAGTTCATCCCTTAAATAAGACAAGCATCAAT
322 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGAT
** * * ** * *
165326 TCTCGGAACAATCTCCATTCTTTT-AAGGATTAGGAAGCC-AAAACGCAATCCCTTCTTTAGGAT
387 TCTCATAACAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAAACGCCTTCACTTCTTTAGGAG
* * *
165389 ACATGATATTGAGGCTTTGGTGTCA
450 ACATGACATTGATGCTTTGGTGTCG
* * * * * *
165414 CAAGAAAAGCTTTTCTTTCTACCGTTTTTGATAAAATCAAAGTTTATTTCCTAA-ATAAGACAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
* * ** * * * *
165478 C-T---T--GC--ACAAATCCC-ATTCTTTTTTGAATTAGGCACCGTAAACAAAGTCTTCTTATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* * * *
165534 AGGATACATGATATTGATGCTTTGGTTTCT-TAAGAAAGGCTTTCTTCCCACCAATTTTAGTGAA
129 AGGATACACGATATTGATGCTTTGGTTT-TGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAA
* * * * *
165598 GTCTAAGTTCATGCCTTAAAAGAGACAAACATAGATTCTAGAAATGAT-TATCTTTCATTTTGTG
192 GTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTG
* *
165662 ATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATGTTGATGATTTTCTTTTCCATAG
256 ATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGG
* * * *
165727 AAATCTTTTCTTTGCCCTATTTTCCCTAAAATCAAAGTTAATCCCTCAAATAAGACTAGCATCGA
321 AAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGA
* * * * * * * *
165792 TTCTCGTAAAAGTTTCAATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGG
386 TTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGA
*
165857 CATGCCATTGATGCTTTGGTGTCG
451 CATGACATTGATGCTTTGGTGTCG
* * * * *
165881 CAAAAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAGGACATAT
1 C-AAGAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * * *
165946 ATGAATAATCATAATAATCCCCATTCTTTTCAAGATTAGGCACCATAAGCATAGTCTTCACATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * * *
166011 GGATACATGATATTAATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAGC
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGT
** * * * *
166076 CTAAGTTTTTGCCTTAAATGAAAGAAACATGGATTCTTA-TAATGATTTTCTTTCATTTTGTGAT
194 CTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGAT
** * * * *
166140 TACACACCAT-AACACATTCACCTCGTTAGGATAAATGATATTAACGATTTTCTTTTCCATGGAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* * *
166204 ATCTTTTCTTTGCACTATTTTTCTTAAAATCAAAGTTCATTCCTTAAATAAGACAAGCATCGATT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATT
* * * * * *
166269 CTCATAACAGTCACCATTCTTTTCGAGATTGCGAACCAAAAACACCTCCACTTCATTAGGAGACA
388 CTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGACA
* *
166334 TGATATTGATGCTTTAGTGTCG
453 TGACATTGATGCTTTGGTGTCG
* * * *
166356 CAAGAGAAGCTTTT-TTTCCCACGGTTTTTTATAGAATCAAGGTTTGTCTCTCAAGAAAGA-TAA
1 CAAGA-AAGCTTTTCTTT-CCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAA
** * * * * *
166419 TTTAGAATACTCGTACTAATCCCTATTCTTTTTAGGATTACGCACCATAAACCTAGTCTTCTAAT
64 CAT-GAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCAT
* * *
166484 TAGGATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCATTTTTTCCACCAATTTTT-TATA
128 TAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTA-A
* * * * *
166548 GAGCCTTACTTCGTACCTCAAATGAGACAAACATGGATTCTAAACATTGATTCTAGTGATGATCT
191 -AGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCT----A--G----TA---ATGATCT
* * * * * **
166613 TTATTCATTTTGTGATTAGACACCATAAACACGTTCCCCTCATTAGGAAAAATGATATTGACAAT
242 TCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGAT
*** * * * * * * *
166678 TTTCTTTTGTGTGAAAATCTTTTC--TACCCTATTTTCCTTCAAACCAAAGTTCATCGCATAAAA
307 TTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAAT
* * * * * *
166741 AAGACAAAG-ATCGATTCTTATAACAGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAACGCATT
372 AAGAC-AAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTT
* *
166805 CCCTTCATTCA-GATG-CATGACATTGATGCTTTGGTGTCG
436 CACTTC-TTTAGGA-GACATGACATTGATGCTTTGGTGTCG
* * * * * * * *
166844 TAAGAACAACTTTTCTTTCTACCATTTTTTTACAGAATCAAAGTTTATCTCTTAA-ATAAGACAA
1 CAAGAA-AGCTTTTCTTTCCACC-GTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAA
** * * * * * *
166908 ACACAAATACACAGACTAATCCCCATTCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACAT
63 ACATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCAT
** * * *
166973 TTTGATACACGATATTGATGCTTTAGTTTTGCTAAAAAATGCATTTTTCCCACCAATTTTTGTAA
128 TAGGATACACGATATTGATGCTTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAA
* *
167038 AGCCTAAGTTTGTGCCTTAAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGT
191 AGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGT
* * * * *
167102 GATTACGCACCA-CAACACATT-TAACTCATTAGGATAAATGACATAGATGA-TTT-TTTTCCAT
255 GATTAGGCACCATAAACACATTCT-CCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCAT
* * * *
167163 GGAAATCATTTCTTTGCCCCATTTTCCTTGAAATCAAAGTCCATCCCTTAAATAAGACAAGCATC
319 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATC
* * ** * *
167228 GATTCTCATAATAGACTCCATTCTTTTTGAGATTGGGAACCAAAAACACCTTCACTTCATTAGGA
384 GATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGA
167293 GACATGACATTGATGCTTTGGTGTCG
449 GACATGACATTGATGCTTTGGTGTCG
* * * * *
167319 CAAGAAAGCCTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTATCTTTTAAGAAAGACAAAC
1 CAAGAAAG-CTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * *
167384 ATGAAAACTCATACTAATCCTTATTCTTTTCAGGATTA-GCACCACAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * * * * *
167448 GGATCCACGATATGGTTGCTTTTGTTTTGCAAAAAAGGCTTTTACCCCACCAATTTTTGTAAAGT
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGT
**
167513 CTAAGTTCGTGCCCCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATT
194 CTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATT
* * * *
167578 AGGCACTATAAACATATTCTCCTCTTTAGGATAAATGATATTGATGATTCT-TTTTCCGA-GGAA
259 AGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCC-ATGGAA
* * * **
167641 ATCCTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTAATACCTTAAATAAGACAAATATCGATT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATT
* * *
167706 CTCATAAAAGTCTCCATTCTTTCCAAGATTGGGAACCAAAAACCCCTTCACTTCTTTAGGAGACA
388 CTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGACA
* *
167771 TGACACTGATGCTTTGTTGTCG
453 TGACATTGATGCTTTGGTGTCG
* *
167793 CAAGAAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGTAAGACATAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * *
167858 ATGAATAATCATAATAATCCCCACTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCACATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAG---T--C--T-
* * *
167923 GGATACACATCACATTAGGATACACAATATTGAAGCTTTGGTTCTGCAAGAAAGGCATTTTTCCC
122 ---T---C-T--CATTAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCC
* * * * * *
167988 ACCAATTTTT-TCAAAGCCTAAGTTTGTGCCTTCAAGGACACAAACATGGATTCTTA-TAATCAT
177 ACCAATTTTTGT-AAAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGAT
* * *
168051 CTTCATTCATTTTGTGATTACGACACCAT-AACACATTCTCCTCGTTAGAATAAATGATATTGAT
240 CTTCATTCATTTTGTGATTA-GGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGAT
* *
168115 GATTTTCTTTTCCATGGAAATCTTTTTTTTGCCCTATTTTCCTTGAAATCAAAGTTCATCCCTTA
304 GATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTA
* * *
168180 AATAGGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCGAGATTGGGAACCAAAAACACC
369 AATAAGACAAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCC
* * * * *
168245 TCCACTTCATTAGGAGACATGATATCGATGCTTTGGTGCCG
434 TTCACTTCTTTAGGAGACATGACATTGATGCTTTGGTGTCG
*
168286 CAAGCGAAA-CTTTTC-TTCC-CTCGATTTTTGATCGAATCAAGGTTTGTCTCTTAAGAAAGACA
1 CAA--GAAAGCTTTTCTTTCCAC-CG-TTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACA
* * * *
168348 AACACGAATACTCATACTAATCCCTATTCTTTTTAGGATTAGGTACCATAAACATAGTCTTCTTA
62 AACATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCA
* * *
168413 TTAGGATCCATGATATTGATGCTTTGGTTTTACAAGAAAGGCTTTTAT-CCACCCAATTTTTGTA
127 TTAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCA-CCAATTTTTGTA
* * * *
168477 AAGTCTAAGTTCGTGTCTCAAATGAGATAAACATGGATTCTAGTAATGATCTTTATTCATTTTGT
190 AAGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGT
** ** * *
168542 GATTAGGTGCCATAAACACATTCTTTTCTTTAGGA-AAATGATATTGATGATTTTCTTTTACATG
255 GATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATG
**
168606 GAAATCTTTTC--TGCCCTATTTTCCTTCGAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
320 GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
* * * * * ** *
168669 ATTGTCGTAACAATCTCCATTCTTTT-AAGGATTAGGAAGCC-AAAATGCAATCATTTCTTTAGG
385 ATTCTCATAACAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAAACGCCTTCACTTCTTTAGG
* * *
168732 ATACAGGACATTGATACTTTGGTGTCG
448 AGACATGACATTGATGCTTTGGTGTCG
** * * * * * *
168759 CAAGAAAAGCTTTTCTTTTTATCGTTTTTGATAAAATCAAAGTTTATTTCCTAA-ATAAGACAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
** ** * ** * * * * **
168823 C-T-AGCACGAAATA-AAAT-CAAAGTT-TATTTCCTAAATAAGATAAACTTGCACGA-ATCCCA
64 CATGAATAC-TCATACTAATCCCTA-TTCT-TTT-C-----AGGAT-TA--GGCACCATA-AACA
** * ** *
168882 TTCTCTT-TCGGATTAGGCACTGTAAATAAAGTCTTCTTATTAGGATACACGATATTGACGCTTT
116 TAGTCTTCTC--ATTA-G----G---ATACA--C--GATATT--GAT----GCT-TTG--G---T
* *
168946 GGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAGTTCGTGCCTTAAAAGAG
155 --TTT-GCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCCTTAAATGAG
*
169011 ACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGGTTAGGCACCATAAACACATTCTC
216 ACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGATTAGGCACCATAAACACATTCTC
169075 CTCATTAGGATAAATGATATTGATGATTTTCTTTTTCGCA---AAATTCTTTTCTTTGCCCTA--
280 CTCATTAGGATAAATGATATTGATGATTTTC-TTTTC-CATGGAAA-TCTTTTCTTTGCCCTATT
* * *
169135 -----T----T-----TT--T--CTTAAATAAGACAAGTATCGATTCTCGTAAAAGTCTCCATTC
342 TTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTCATAACAGTCTCCATTC
* * * * *
169182 TTTCCAAGATTGGGAACTAAAAACCCCTTCACTTCCTTAGCAGACATGACATTGATGCTTTGGTG
407 TTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGACATGACATTGATGCTTTGGTG
*
169247 TTG
472 TCG
* * * * * *
169250 CAAGAAAAGCTTTTCTTTCCATCATTTTTTATAGAATCAAGGTTTGTGTCTTAAGTAAGACATAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * * *
169315 ATGAATAATCATAATAATCCCTAGTCTTTTCAAGG-TTAGGTAGCATAAACATAGTCTTCACATT
65 ATGAATACTCATACTAATCCCTATTCTTTTC-AGGATTAGGCACCATAAACATAGTCTTCTCATT
* * * * * * *
169379 AGGATAAATGATACTGATGCTTTGGTCTCGCAAGAAAGGCATTTTTCCCACCAATGTTTGAAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAG
* * * * * *
169444 -CTTAAATTTGTGCCTTATATGAGACAAACACGGATTCT--TATATTATCTTCATTCATTTTTTG
193 TC-TAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTG
*
169506 ATTATGCACCAT-AACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGG
256 ATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGG
* * * * *
169570 ATATCTTTTCTTTGCCCTATTTTCCTTGAAATCGAAGTTCATCCCTTAAATAATATAAGCATCGA
321 AAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGA
* * ** * * * *
169635 TTCTCATAGCAGTCTCTATTCTTTTTGAGATTAGGAACCAAAAACACCTCCACTTCATTAGGAGA
386 TTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGA
* *
169700 CATGATATTGATGCTTTGGGGTCG
451 CATGACATTGATGCTTTGGTGTCG
* * * * *
169724 CAAGCGAAGCTTTTC-TTCTCACGGTTTATGATAGAATCAAGGTCTATCTCTTAAGAAAGACAAA
1 CAAG-AAAGCTTTTCTTTC-CACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAA
* * *
169788 CAAGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATTGTCATCTCATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* * ** * * * *
169853 AGAATCCTTGATATTGATGCTTCGGTTTTGCATGAAAGGCTTTTATCCCACTAATTTTTGTAATG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG
* * * * ** *
169918 TCCAAGTTCATGTCTCAAATGAGACAAACCCGGATTCTAGTAATGATCTTCATTCATTTTGCGAT
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
* * ** * * * *
169983 TAGGCACCTTAAATACATTCTTTTCATTAGAAAAAAAAGA-ATTGATGATTTTCTTTTACATGGA
258 TAGGCACCATAAACACATTCTCCTCATTAG-GATAAATGATATTGATGATTTTCTTTTCCATGGA
* ** *
170047 AATCTTTTC--TGCCATATTTTCCTTCGAATCAAAGTTCATCCCTTAAATAAGATAAGCATCGAT
322 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGAT
* ** * ** *** * *
170110 TCTCATAACAGTCTCAATTCTTTT-AAGGATTAAGAAGCTGAAACGCAAACCCTTCTTTAGGATA
387 TCTCATAACAGTCTCCATTCTTTTCAA-GATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGA
*
170174 CATGACATTGATGCTTTGGTGTTG
451 CATGACATTGATGCTTTGGTGTCG
* * * * * * * *
170198 CAAAAAAAGCTTTTCTTTCTACCGTTTTTGATAAAATCAAAGTTTATTTCCTAA-ATATGACAAA
1 C-AAGAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
* * * * * * * *
170262 C-T---T--GCAT--GAATCCC-ATTCTTTCCCGGATTAGGCAACGTAAACAAAGTTTTCTCATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* * ** * * * *
170318 AGGGTGCACGATATTGATGCTTTGGTTTCACAAGAAAAGCTTTCTTCCTACCAATTTTAGCAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAG
*
170383 TCTAAGTTCAG-GCCTTCAATGAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTG
193 TCTAAGTTC-GTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTG
** ** * ** * *
170446 ATTAGGCACTGT-CGCAACTTTCTCCTTTTTAGGATAAATGATATTGATGAATTT-TTTTGCATG
256 ATTAGGCACCATAAAC-ACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATG
* * * * * *** *
170509 AAAATCTTTTATTTGCCCTATTTTTCGTAAAATCAAAGTTCATCCCTTAAATAAAAGGGGCATCC
320 GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
* * * * *
170574 ATTTTCGTAACAGTCTCCATTCTTTTAAAGAATGGGATA-CTAAAACGGATTCCCTTCCTAAAAC
385 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGA-ACCAAAAAC-G----CC-T--T----C
* *
170638 GGATTCCCTTCTTTAGGAGACATG-CTGTTGATGCTTTGGTGTTG
437 --A----CTTCTTTAGGAGACATGAC-ATTGATGCTTTGGTGTCG
* * * * * * * * *
170682 TAAGAAAAACTTTTGTTTCTACCATTTTTTATGGAACCAAAGTTTGTCT-TT-A-AAAGACAAAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* ** * * **
170744 ATGAATACTCATACTAGTCCCTATTCTTTTTGGGACTAGGTACCATATGCATAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
*
170809 GGATACACGATATTAATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAA
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAA
* * *
170874 GCCTAACTTCGTGCCTTAAATGAGACAAACATGG-TTCTAGTAATGATCTTCATTCATTTTGGGA
192 GTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGA
* * *
170938 TTAGGCACCATAAACACATTC-CCTTTATTAGGA-AAAGTGATATTGATGATTTTCTTTTTCGTG
257 TTAGGCACCATAAACACATTCTCC-TCATTAGGATAAA-TGATATTGATGATTTTCTTTTCCATG
* * * *
171001 TAAATCTTTTC--TGCCCTATTTTCCTTCAAAA-CAAAGTTCATCCCATAAATAAGACAAGGACC
320 GAAATCTTTTCTTTGCCCTATTTTCCTT-AAAATCAAAGTTCATCCCTTAAATAAGACAAGCATC
* * * ** * * * * * *
171063 TATTC-CTATAACAGTCACCATTCTTTTGAAGATTAAGAAGCTAAAATGCATTCCCTTCATTAGG
384 GATTCTC-ATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGG
**
171127 ATG-CATGACATTGATGCTTTGGCATCG
448 A-GACATGACATTGATGCTTTGGTGTCG
** * * * * * *
171154 CAAGAAAAGCTTTTCTTTCCACTATTTTTTACAGAATTAAAGTTTATCTCTTAA-ATAAGGCAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
** * * * * *
171218 CACAAATACTCATACTAATCCCCAATCTTTTTAGGATTAGGCACCATTAACATAGTCTTCACATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
** * ** * * *
171283 TTGAT-CTACGATATTGATGCTTTAGTTTCCCAAAAAAAGGCATTTTTCGCACCAATTTTTGTCA
129 AGGATAC-ACGATATTGATGCTTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAA
* * * *
171347 AGCCTAAGTTTGTGCCCTAAATGAGACAAACATGGATTCTTA-TATTGATCTTCATTCATTTTGT
191 AGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGT
* * * * *
171411 GATTACGCACCAT-AACACATTTTCCTCTTTAGGATAAAGGATATTGATGATTTATTTTTTCCAT
255 GATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTT-TCTTTTCCAT
* * * * *
171475 GGAAATCTTTTCTTTGTCCTATTTTCCTTGAAATCAAACTTCATCCCTTAAACAAGACAAGTATC
319 GGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATC
* * * * * * *
171540 GATTCTCATAATAGTCTCCATTCTTTTCGAGAATGGGAACCAAAAACACCTTCACTACATTAGAA
384 GATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGA
*
171605 AACATGACATTGATGCTTTGGTGTCG
449 GACATGACATTGATGCTTTGGTGTCG
* ** * * * *
171631 CAAGAAAGCCTTTTCTTCCCATGGTTTTTAATACAATCAAGGCTTGTCT-TCTAAGAAAGAAAAA
1 CAAGAAAG-CTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCT-TAAGAAAGACAAA
** * * *
171695 CACAAATACTCATCCTAATCCCTATTCTTTTCAGGATTAGGTACCATAAACATAGTCTTCTTATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* *
171760 AGGATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG
* * *
171825 TCTAAGTTTGTGCCTCAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTTATTTTGTGAT
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
* * *
171890 TAGGCACCATGAACACATTCTCCTTATTAGGATAAATGATATTGATGATTTTC--TTCTATGGAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
*
171953 ATCTTTTCTTTGCCCTATTTTCCTTGAAATCAAAGTTCAT-CCTTCAAATAAGACAAGCATCGAT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTT-AAATAAGACAAGCATCGAT
* * * * * ** ** *
172017 TCTCATAATAGTCTCCATTTTTTTCGATATTGGGAACCAAAAACACCTTCTTTTGATTAGGAAAC
387 TCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGAC
172082 ATGACATTGATGCTTTGGTGTCG
452 ATGACATTGATGCTTTGGTGTCG
* * * *
172105 CAAGAAAGCTTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTGTCTTTTAAGAAAGACAAAC
1 CAAGAAAGC-TTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * *
172170 ACGAATACTCATACTAAACCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * * * * *
172235 GGATACACGATATTGATGCTTTGATTTAGCAATAAAGGATTTCTTCCCACTAATTTTAGTAAAGT
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGT
* * **
172300 CTAAGTTCATGCTTTAAAAAAGACAAACATGGATTCTAGTAATGAT-TATCATTCATTTTGTGAT
194 CTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGAT
* *
172364 TAGGCACCTTAAACACATTCTCCTCATTAGGATAAATGATATTGATAATTTT-TTTTCCATGGAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* * * * *
172428 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCGAAGCTAATCCCTTAAATAAGACAGGCATCAATT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATT
* * * *
172493 CTCTTAA-ATGTCTCCATTATTTCCAAGATTGGGAACCAAAAAC-CCTTCACTTCCTTAGGAGAC
388 CTCATAACA-GTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGAC
*
172556 ATGACGTTGATGCTTTGGTGTCG
452 ATGACATTGATGCTTTGGTGTCG
* * * * * * *
172579 CAAGAAAAGCTTTTCTTTCTACCGTTTTTAATAAAATCAAGGTCTATTTCCTAA-ATAAGACAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
* * * * *
172643 C-T---T--GC--ACGAAT-CTTATTCGTTTTC-GGATTAGGCACCGTAAACAAAGTCTTCTCAT
64 CATGAATACTCATACTAATCCCTATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCAT
* * * *
172698 TTGGATACATGATATTGATGCTTTTGGTTTTGCAACAAAGGCTTTCTTCCCACCAATTTTAGTAA
128 TAGGATACACGATATTGATGC-TTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAA
* * * *
172763 AGTTTAAGTTCGTCCCTTAAATGAGACAAAAATAGATTCTAGTAATGAT-TATCATTCATTTTGT
191 AGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGT
* * * * ** *
172827 GATTAGGCACCGTAATCACTTTCTCTTTTTTAGGATAAATGATATTGATGATTTTCTTTTGCATG
255 GATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATG
* * * * * *** *
172892 AAAATCTTTTATTTGCCTTATTTTCCTTAAAATCAAAGTTCATCCCCTAAATAAAAGGGGCATCT
320 GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
* * * * * ** * * * *
172957 ATTCTCGTAATAATCTCCATTCTTTTAAAGAATGGGATGCTAACACGCATTCCCTTCTTTAGGAG
385 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAG
* *
173022 ACATG-CTGTTGATGCTTTGGTGTTG
450 ACATGAC-ATTGATGCTTTGGTGTCG
* * * * * * * *
173047 TAAGAAAAACTTTTGTTTCTACCATTTTT-AGTAGAACCAAAGTTTGTCTC-T-A-AAAGAAAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGA-TAGAATCAAGGTTTGTCTCTTAAGAAAGACAAA
* * * **
173108 CTTGAATACTCATACTAATCCCCATTCTCTTTC-GGATTAGGTACCATATGCATAGTCTTCTCAT
64 CATGAATACTCATACTAATCCCTATTCT-TTTCAGGATTAGGCACCATAAACATAGTCTTCTCAT
* * *
173172 TAGGATACACAATGTTAATGCTTTGGTTTTGCAAGAAAGGCATTTTTCCCACCAATTTTTTTGTA
128 TAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTA
* * * *
173237 AAGCCTAACTTCGTGCCTCAAATTAGACAAACATGGATTCTAAACAAGGATTCTAGTAATGATCT
190 AAGTCTAAGTTCGTGCCTTAAA-T-G------A--GA--C-AAACATGGATTCTAGTAATGATCT
* *
173302 TTATTCATTTTGTGATTAGGCACCATAAACACATTC-CCTTTATTAGGA-AAAGTGATATTGATG
242 TCATTCATTTTGTGATTAGGCACCATAAACACATTCTCC-TCATTAGGATAAA-TGATATTGATG
*** * * * * * *
173365 ATTTTCTTTTGTGTGAAAATCATTTC--TGCCCTATTTTCCTTCAAACCGAAGTTCATCCCATAA
305 ATTTTCTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAA
* * * * ** * *
173428 ATAAGGCAAGGATCGAATC-CTATAACAGT-TGCCATTCTTTTGAAGATTAAGAAGCTAAAACGC
370 ATAAGACAAGCATCGATTCTC-ATAACAGTCT-CCATTCTTTTCAAGATTGGGAACCAAAAACGC
* * * *
173491 ATTCCCTTCGTTAGGATG-CATGACATTGATGCTTTAGG-GTTG
433 CTTCACTTCTTTAGGA-GACATGACATTGATGCTTT-GGTGTCG
* * * * *
173533 CAAGAAAAGCTTTTCTTTCCACCATTTTTTACAGAATCAAAGTTTATCTCTTAA-ATAAGACAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
** * * * *
173597 CACAAATACTCATACTAATCCCCATTCTTTTTAGGATTAGGCACCATCAACATAGTCTTCACATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
*** * * ** * * ** *
173662 TTAATACACGACATT-AAGCTTTTAATTTCGCAAAAAAAAACATTTTTCACACCAATTTTTGTAA
129 AGGATACACGATATTGATGC-TTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAA
* ** * *
173726 AGCCTAAGTTTATGCCTCAAATGAGGCAAACATGGATTCTTA-TAATGATCTTCATTCATTTTGT
191 AGTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGT
** * * ** *
173790 GATTACACACCAT-AACACATTTTTCTCATCGGGATAAAAGATATTGATGATTTT-TTTTCCATG
255 GATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATG
* * *** *
173853 GAAATCTTTTCTTTGCTCTATTTTCCTTGAAATCAAAGTTCATCCAACAAACAAGACAAGCATCG
320 GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
* * * * *
173918 ATTCTTATAATAGCCTCCATTCTTTTCGAGATTGGGAACCAAAAACACCTTCACTTCATTT-GGA
385 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTC-TTTAGGA
173982 GACATGACATTGATGCTTTGGTGTCG
449 GACATGACATTGATGCTTTGGTGTCG
* * * * * *
174008 AAAGAAAGCCTTTTCTTCCCACGGTTTTTGATACAATCAAGGTTTGTCTTTTGAGAAAGACAAAC
1 CAAGAAAG-CTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * * *
174073 ACGAATACTCATACTAACCCCTATTCCTTTCAGGATTAGGCAGCATAAACGTAGTCTTCTTATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * ** * * * *
174138 GGATCCATGATATTGATGCTTTGGATTTT-CAAGAACACTCATAGTATT--C-TCTATACTTT-T
130 GGATACACGATATTGATGCTTTGG-TTTTGCAAGAA-AGGC-T--TTTTCCCACCAAT-TTTTGT
* * * * * * *** * * *
174198 CAGGAT-T-AG-AC--ACCATAAACAT-AGTCTTCTCTTTAGGA-TCCATGATATTGATGC-T--
189 AAAG-TCTAAGTTCGTGCC-TTAA-ATGAGAC-AAAC-AT-GGATTCTA-G-TAATGAT-CTTCA
** ** * *** * * * * *
174253 TTGGTTTTGTGAGAAAGGCTTTTATCCCATCAA-TTTTTGTAAAGTCTAAGTTCGTGTCTCAAAT
245 TTCATTTTGTGA-TTAGGC----A--CCATAAACACATTCT----CCTCA-TTAG-G-AT-AAAT
* *** ** *** **** *
174317 GAGACAAACGTGGA--TTCTAGT--A-GTG--ATCTTCATTCATTTTGTGATTAGGCACCAT-AA
295 GATATTGA--T-GATTTTCTTTTCCATG-GAAATCTT--TTC--TTTG-CCCTATTTTCCTTAAA
* * * * * * * **
174374 A-CACA-TTCTTTTCATTAGAAAAAATGATATTG-AT-GATTTTCTTTTGCATGGAAATCTTTTC
351 ATCAAAGTTC-ATCCCTT--AAATAA-GACA-AGCATCGA--TTC---T-CAT---AA-C-AGTC
* * * * * * * * * *
174435 TTCCCTT-TTTTC---CTT-CGAATC--AAA-GTTCATCCCTTAATTAAGATAAGCATCGATTCT
400 -TCCATTCTTTTCAAGATTGGGAACCAAAAACG-CCTTCACTT-CTTTAG--GAG-A-C-A---T
* * *
174492 CGTAACAGTCTCCATTCTTTTAAGGAT-TAG
454 -G--ACA-T-T-GATGC-TTT--GG-TGTCG
* * * * * * * * **
174522 GAAGCAAAAAC---GCTAT-C-CC-TTCTTTAGGATACATGACATTGATGCTTTTGTGTCACAAG
1 CAAG--AAAGCTTTTCTTTCCACCGTT-TTT--GAT--A-GA-A-TCAAG-GTTTGTCTCTTAAG
* * * * * * * * * * * * *
174581 AAAAGCTTTTCTTTCTACCGTTTTTAATAAAATCAAAGTTTATTTCCTAAATAAGACAAACTTGC
55 -AAAG--------ACAAAC---ATGAAT--ACTCATA--CTAATCCCT--AT---TC---TTTTC
* ** * ** *** * *
174646 ATGAATCCTATTCTTTTCCGGATTAGGCACCGTAAACAAAGTCTTCTCATTAGGATACATGGTAT
96 A-GGAT--TAGGC---ACCATAAAC---A---T------AGTCTTCTCATTAGGATACACGATAT
** *
174711 TGATGCTTTGGTTTCACAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAGTCTAAGTTCGTGCC
143 TGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAGTCTAAGTTCGTGCC
* * * * * *
174776 TTAAATAAGACAAACATGGATTCTAGTAATGAAT-ATCATTTATTTTGTGATTAGCCACCGTAAC
207 TTAAATGAGACAAACATGGATTCTAGTAATG-ATCTTCATTCATTTTGTGATTAGGCACCATAAA
* * ** * * * * *
174840 CACTTTCTCTTTTTTAGGATAAATGATATTGATCATTTTCTTTTGCATGAAAATCATTTATTTGC
271 CACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATCTTTTCTTTGC
* * * * * * *
174905 CCTATTTTCCCTAAAATCAAAGTCCATCTCTTAAATAA-A-AGGGACATCCATTCTCGTAACAGC
336 CCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACA-AG-CATCGATTCTCATAACAGT
* * * ** * * * * ***
174968 CTCTATTCTTTTAAAGAATGGGATGCTAAAATGCATTC-CTTTCTTTAGGAGAGATGTTGTTGAT
399 CTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCAC-TTCTTTAGGAGACATGACATTGAT
*
175032 GCTTTGGTGTTG
463 GCTTTGGTGTCG
* * * * * * * * * *
175044 TAAGAAAAACTTTTGTTTCTACCATTTTTTAAAGAACCAAAGTTTGTCTC-TAA-AATG-CAAAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* ** * * * **
175106 ATGAATACTCATACTAATCCCCATT-TTTTTTGGATGAGGTAACATATGCATAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* *
175170 GGATACACGATATTGATGCTTTGGTATTACAAGAAAGGCATTTTTCCCACCAATTTTTTTGTAAA
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGTAAA
* * * *
175235 GCCTAACTTCGTGCCTCAAATGAGACCAACATGGATTCCAAACATGGATCTAGTAATGATCTTCA
192 GTCTAAGTTCGTGCCTTAAATGAGACAAACATGG---------AT---TCTAGTAATGATCTTCA
* * *
175300 TTCATTTTGTGATTAGGCACCATAAACACATTCCCCTCATTAGGAAAAATGATGTTGATGATTTT
245 TTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTT
* * * *
175365 CTTTTGCGTGGAAATCTTTTC--TGCCCTATTTTCCTTCAAACCAAAGTTCATCCCTTAAATAAG
310 CTTTTCCATGGAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAG
* * * * *
175428 ACAAAG-ATCGATTCTTATAACAGTCTCCATTCTTTT-AATGATTGAGAAGCTAAAACGCGTTTC
375 AC-AAGCATCGATTCTCATAACAGTCTCCATTCTTTTCAA-GATTGGGAACCAAAAACGC-CTTC
*
175491 -CTT-TATTAGGATG-CATGACATTGATGCTTTGGTGTCA
437 ACTTCT-TTAGGA-GACATGACATTGATGCTTTGGTGTCG
* * * * * * * *
175528 CAACAAAAGCTTTTCTTTCCACCATTTTTTACAAAATGAAAGTTTATCTCTTAA-ATAAGACAAA
1 CAA-GAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
** * * * *
175592 CACAAATACTCATACTAATCCCCATTCTTTTTAGGATTAGCCACCATAAACATAGTCTTCACATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
** * * * * * *
175657 TTGATACACAATATTGATGCTTTAGTATTCCAAAAAAAGGCATTTTTCCCACCAATTTTTTTAAA
129 AGGATACACGATATTGATGCTTTGGTTTTGC-AAGAAAGGC-TTTTTCCCACCAATTTTTGTAAA
* * * * *
175722 GCCTAAGTTTGTGCCTTGAATGAGACAAACATGGATTCT--TATATGATCTCCATTTATTTTGTG
192 GTCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTA-ATGATCTTCATTCATTTTGTG
* * **
175785 ATTATGCACCAT-AACACATTTTCCTTTTTAGGATAAATGATATTGATGA-TTTCTTTTCCATGG
256 ATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGG
* * * *
175848 AAATCTTTTCTTTGCCCTATTTTCCTTGAAATCGAAGTTCATCCCTTAAACAAGACAAGCATCAA
321 AAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGA
* * ** * ** * *
175913 TCCTCATGACAGTCTCCATTCTTTTTGAGATTGGGAACCAGAAATACCTTCATTTCGTTAGGAGA
386 TTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGA
*
175978 CATGATATTGATGCTTTGGTGTCG
451 CATGACATTGATGCTTTGGTGTCG
* ** * *
176002 CAAGAAAAGCTTTTCTTCCCATGGTTTTTGATAGAATCAGGGTTTGTCTCTTAAGAAAGACAATC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* *
176067 AAGGATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * *
176132 TGATCCATGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTGTCCCACCAATTTTTGTAAAGT
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAGT
* * * *
176197 CTAAGTTCGTGTCTCAAATGAGAAAAACATGGATTCTAGTAATGATCTTCAGTCATTTTAG-GAT
194 CTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTT-GTGAT
* ** * * * * *
176261 TAGGCACCATAAACATATTCTTTTCAATAGGAAAAATTATATTGAGGATTTTCTTTTGCATGGAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* * ** * *
176326 A---TTT-TTTGTCCTATTTTTCTTCGAATCAAATTTCATCCCTTAAATAAGACAGGCATCGATT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATT
* * * * ** * *
176387 CTCATAATAGTCCCCATT-TTTTTAAGGATTAGGAAGCC-AAAACGCAATCCCTTCTTTAGGATA
388 CTCATAACAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAAACGCCTTCACTTCTTTAGGAGA
*
176450 GATGACATTGATGCTTTGGTGTCG
451 CATGACATTGATGCTTTGGTGTCG
* * * * * * * *
176474 CAAAAAAAGGTTTTCTTTCTACCGTGTTTGATAAAATCAAAGTTTGTTTCCTAA-ATAAGACAAA
1 C-AAGAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
* * * * *
176538 C-T---T--GCAT--GAAT-CCTATTCTTTTCTGGATTAGGCATCATAAACAAAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* * * *
176594 AAGATACATGATATTGATGCTTTGGTTTCGCAAGAAAGGCTTTCTTCCCACCAATTTTAGTAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTT-TTCCCACCAATTTTTGTAAAG
* *
176659 TCTAAG-TCTGTGCCTTAAATGAGACAAATATGGATTCTAGTACT-AT-TATCATTCATTTTGTG
193 TCTAAGTTC-GTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTG
* * * ** * * * * *
176721 ATTAGGCACCGTAACCACTTTCTCCTTTTTAGGATAAATGATACTGATCATTTTCTTTTGCACGA
256 ATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGG
* * * * *** *
176786 AAATATTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTCATCTCTTAAATAAAAGGGGCATCCA
321 AAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGA
* * ** * * * *
176851 TTCTCATAACAGTCTCCATTCTTTTAAAGAATGGGATGCTAAAACGCATTCCCTTCTTTAGGAGG
386 TTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGA
176916 CATG-CTATTGATGCTTTGGTGTCG
451 CATGAC-ATTGATGCTTTGGTGTCG
* * * * * * * * * * *
176940 TAAGAAAAACTTTTGTTTCTACCATTTTTTATAGAACCAAAGTTTGTC-CCT-A-AACGGCAAAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* ** * **
177002 ATGAATACTCATACTAATCCCCATTCTTTTTTGGATTAGGTACCATATGCATAGTCTTCTCATTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* * * * * *
177067 GGATACACAAAATTGATGCTCTAGTTTTGCAAGAAAGACATTTTTCCCACCATTTTTTTGTAAAG
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCA-ATTTTTGTAAAG
* * *
177132 CCTAACTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTCTGAT
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
* * * * * * *
177197 TAGGCACCATAAACACACTCCCCTCATTAGGAAAAATGAAATTGATGATTTTCTTTTGCGTGAAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* *
177262 ATCTTTTC--TGCCCTATTTTCCTTCAAA-CTAAAGTTCATCCCTTAAATAAGACAAGGATCGAT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATC-AAAGTTCATCCCTTAAATAAGACAAGCATCGAT
* * * * * * * * *
177324 TCTTATAACAGTCTCCATTCTTTTGAAGATTGAGAAGCTAAAATGCATTCCCTTCATTAGGATG-
387 TCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGA-GA
*
177388 CGT-ACATT-ATTGCTTTGGTGTCG
451 CATGACATTGA-TGCTTTGGTGTCG
* * * * * *
177411 CAAGAAAAGCTTTTCTTTCCACCATTTTTTACAGAATCAATGTTTATCTCTTAA-ATAAGATAAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGA-AAGACAAA
** * * * * *
177475 CACAAATACTCATACTAATCCCCATTCTTTTTAGGATCAGGCACCATTAACATAGTCTTCACATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
** * * * *
177540 TTGATACACGATATTGATGCTTTAGTTTGGCAAAAAGAGGGATTTTTCCCACCAATTTTTGTAAA
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAA-A-GGCTTTTTCCCACCAATTTTTGTAAA
* * * *
177605 GCCTAAGTTTGTCCCTTTAAA-GAGACAATCATGGATTCTTA-TAATGATCTTCATTCATTTTGT
192 GTCTAAGTTCGTGCC-TTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGT
* * * * *
177668 GATTATGCACCAT-AATACATTTTCCTCATTAGGATAAATGATACTGATGA--TT-TTTTCCATA
255 GATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATG
* * * ** *
177729 GAAATTTTTTTTTTGCCCTATTTTCCTTGAAATTGAAGTTCATCCCTTAAACAAGACAAGCATCG
320 GAAATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCG
* * * * * * * *
177794 ATTCTTATTATAGTCTCCATTCTTTTCGAGATTGGGATCCAAAAACACCTTCACCTCATTAGGAG
385 ATTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAG
*
177859 ACTTGACATTGATGCTTTGGTGTCG
450 ACATGACATTGATGCTTTGGTGTCG
* * * * *
177884 CAAGAAAGCCTTTTCTTCCCACGGTTTTTGATACATTCAAGGTTTGTCTCTTAAGAACGACAAAC
1 CAAGAAAG-CTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * *
177949 AAGAATACTGC-TACAAATCCCTATTCTTTTCAAGATTAGGCACCACAAACATAGTCTTCTTATT
65 ATGAATACT-CATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* **
178013 AGGATACATGATATTGACACTTTGGTTTTGCAAGAAAGGCTTTTATCCCACCAATTTTTGTAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTT-TCCCACCAATTTTTGTAAAG
* * * * * *
178078 TCTAAGTTCATGCCTCAAATGAGACAAACATGGGTTTTAGTAATGATCTACACTCATTTTGTGAT
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
* * *
178143 TAGGCACCATAAACACATTCTCCTCATTAAGATAAATGATATTTATGATTTTCTTTTCCATGAAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* ** * *
178208 ATCTTTTCTTTGCCCTATCTTCCTTAACCTCAAAGTTAATCTCC-TAAACAAGACAAGCATCGAT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATC-CCTTAAATAAGACAAGCATCGAT
* * * * * * *
178272 TCTCGTAAAAGTCTCTATTC-CTTCTAGATTGGGAACCAAAAACCCCTTCACTTCCTTAGGAGAC
387 TCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGAC
*
178336 ATGACATTGATGCTTTGGTGTGG
452 ATGACATTGATGCTTTGGTGTCG
* * * **
178359 CAAGAAAAGCTTTTCTTTCCGCCGTTTTTGATAGAATCAAGGTTTGCCTCTTAAGTAAGACGTAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * * *
178424 ATGAATAATCATAATAAT-CTTCATTCTTTTTAAGATTAGGCACCATAAAC--AGTCTTCACATT
65 ATGAATACTCATACTAATCCCT-ATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* *
178486 AGGATACACGGTATTGATGCTTTGGTTTCGCAAGAAAGGCATTTTTCCCACCAATTTTTGTAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAG
* * * *
178551 CCTAAGTTTGTGCCTTGAATGAGACAAACATGGATTCTTA-TAATGATCTTCATTTATTTTGTGA
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTC-TAGTAATGATCTTCATTCATTTTGTGA
* * * *
178615 TTACGCACCAT-AACACATTCTCCTCAATAGGATAAATGATATTCATAATTTTCTTTTCCATGGA
257 TTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGA
** * * *
178679 AATCTTTTCTTTGCTTTATTTTCCTTGAAATTAAAGTTCATCCCTTAAATAAGACAAACATCGAT
322 AATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGAT
* * * ** * *
178744 TCTCATAATAGACTCCATTCTTTTCGAGATTGGGAACCAAAAAAACATTCACTT-TATTAGGAAA
387 TCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCT-TTAGGAGA
*
178808 CATGATATTGATGCTTTGGTGTCG
451 CATGACATTGATGCTTTGGTGTCG
* *
178832 TAAGAGAAGCTTTTCTTCCCA-CGATTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAA
1 CAAGA-AAGCTTTTCTTTCCACCG-TTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAA
* * * *
178896 CAAGAATACTCCTACAAATCCCTATTCTTTTCAAGATTAGGCACCATAAACATAGTCTTCTCATT
64 CATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATT
* * *
178961 AGGATCCAAGATATTGATGCTTTGGTTTTGCAAGAAAGG-TTTTTATCCACCAATTTTTGTAAAG
129 AGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTT-CCCACCAATTTTTGTAAAG
* * * * * *
179025 TATAAGTTCATGTCTCAAAAGAGACAAACATGGATTCTAGTAATGATCTTCATTCGTTTTGTGAT
193 TCTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGAT
** * * * *
179090 TAGGCACCATAAACACATTCTTTTCATTAGGAAAAATGATATTAATGATTTTCTTTTGCGTGGAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* * ** *
179155 ATCTTTTC--TGCTCTGTTTTCCTTCGAATCAAAGTTTATCCCTTAAATAAGACAAGCATCGATT
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATT
* * * ** * * *
179218 CTCATAACAGTCTCTATTCTTCT-AAGGATTAGGAAGCC-AAAACGCAATCCCTTCTTTAAGATA
388 CTCATAACAGTCTCCATTCTTTTCAA-GATTGGGAA-CCAAAAACGCCTTCACTTCTTTAGGAGA
179281 CATGACATTGATGCTTTGGTGTCG
451 CATGACATTGATGCTTTGGTGTCG
* * * * * * * * *
179305 CAAGAAAAGCTTTTCTTTCTACTGTTTTTGATAAAATCAATGTTTATTTCCTAAAAAAGGCAAAC
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAAC
* * * * * **
179370 -T---T--GCAT--GAATCCC-ATTTTTTTC-GAATTAGGCACCATAAACAAAGTCTTCTTTTTA
65 ATGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTA
* ** * *
179425 GGATACACAATATTGATGCTTTGGTTTCACAAGAAAGGCTTTTTTCCCACCAATTTTAGTAAAAT
130 GGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAATTTTTGTAAAGT
* * * *
179490 CTAAGTTCGTGCCTTAAATGAGGCAAACATGGATTGTAGTAATGAT-TATCTTTCATTTTGTGAC
194 CTAAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCT-TCATTCATTTTGTGAT
* * ** * * *
179554 TAGGCACCATAACCACTTTCTCCTTTTTAAGATAAATGATATTGATGATTTTCTTTTGCATGAAA
258 TAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAA
* *
179619 ATCTTTTATTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAA-A-AAGGGCATCCA
323 ATCTTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAA--GCATCGA
* * * ** * * *
179682 TTCTCATAACAGTCTCCAATCTTTTAAAGAATGGGATGCTAAAATGCATTC-CTTTCTTTAGGAG
386 TTCTCATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCAC-TTCTTTAGGAG
* ***
179746 ACACGTTGTTGATGCTTTGGTGTCG
450 ACATGACATTGATGCTTTGGTGTCG
* * * * * * * * * *
179771 TAAGAAAAACTTTTGTTTCTACCATTTTTTATAAAACCAAAGTTTGTCTC-CAA-AATAGGACAA
1 CAAG-AAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAA-A-GACAA
* * * * ** *
179834 ATATGAATACTCATAC-AATCTCTATTCTTTTTC-GGATTATGTACCATATGCATAGTCTTCTTA
63 ACATGAATACTCATACTAATCCCTATTC-TTTTCAGGATTAGGCACCATAAACATAGTCTTCTCA
* **
179897 TTAGGATACATGATATTGATGCTTTGGTTTTGCAAGAAACACATTTTTCCCACCAATTTTTTTGT
127 TTAGGATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGC-TTTTTCCCACCAA--TTTTTGT
** * * * *
179962 AAACCCTAACTTCGTGCCTCAAACGAGACAAACACGGATTCTAAACATGGATTCTAGTAATGAAC
189 AAAGTCTAAGTTCGTGCCTTAAA--TG------A--GA--C-AAACATGGATTCTAGTAATGATC
* * *
180027 TTCATTCATTTTGTGATTAGGCACCATAAACACATTCCCCTCATTAGGAAAAATTATATTGATGA
241 TTCATTCATTTTGTGATTAGGCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGA
* * *
180092 CTTTCTTTTGCGTGGAAATCTTTTCTTT
306 TTTTCTTTTCCATGGAAATCTTTTCTTT
180120 TGAAGATTGA
Statistics
Matches: 12176, Mismatches: 2290, Indels: 1411
0.77 0.14 0.09
Matches are distributed among these distances:
452 2 0.00
453 5 0.00
454 60 0.00
455 30 0.00
456 61 0.01
457 4 0.00
459 1 0.00
461 3 0.00
462 68 0.01
463 206 0.02
464 179 0.01
465 456 0.04
466 555 0.05
467 276 0.02
468 87 0.01
469 8 0.00
470 26 0.00
471 114 0.01
472 901 0.07
473 1232 0.10
474 2307 0.19
475 1672 0.14
476 647 0.05
477 315 0.03
478 14 0.00
479 7 0.00
480 20 0.00
481 15 0.00
482 8 0.00
483 14 0.00
484 227 0.02
485 23 0.00
486 248 0.02
487 88 0.01
488 324 0.03
489 303 0.02
490 363 0.03
491 231 0.02
492 219 0.02
493 266 0.02
494 6 0.00
495 6 0.00
496 12 0.00
497 5 0.00
498 4 0.00
499 11 0.00
500 7 0.00
501 6 0.00
502 8 0.00
503 9 0.00
504 1 0.00
505 2 0.00
506 4 0.00
507 4 0.00
508 118 0.01
509 34 0.00
510 9 0.00
511 13 0.00
512 8 0.00
514 8 0.00
515 6 0.00
516 4 0.00
517 5 0.00
518 15 0.00
519 5 0.00
520 1 0.00
521 9 0.00
522 8 0.00
524 6 0.00
525 3 0.00
526 6 0.00
527 6 0.00
530 4 0.00
531 1 0.00
532 5 0.00
533 4 0.00
534 11 0.00
535 1 0.00
536 5 0.00
537 3 0.00
538 3 0.00
539 8 0.00
540 8 0.00
541 1 0.00
542 7 0.00
543 7 0.00
544 3 0.00
545 15 0.00
546 12 0.00
547 14 0.00
548 8 0.00
549 2 0.00
550 7 0.00
551 1 0.00
554 5 0.00
555 4 0.00
556 2 0.00
557 2 0.00
558 1 0.00
559 14 0.00
560 56 0.00
561 16 0.00
562 4 0.00
563 6 0.00
564 2 0.00
ACGTcount: A:0.31, C:0.19, G:0.14, T:0.36
Consensus pattern (474 bp):
CAAGAAAGCTTTTCTTTCCACCGTTTTTGATAGAATCAAGGTTTGTCTCTTAAGAAAGACAAACA
TGAATACTCATACTAATCCCTATTCTTTTCAGGATTAGGCACCATAAACATAGTCTTCTCATTAG
GATACACGATATTGATGCTTTGGTTTTGCAAGAAAGGCTTTTTCCCACCAATTTTTGTAAAGTCT
AAGTTCGTGCCTTAAATGAGACAAACATGGATTCTAGTAATGATCTTCATTCATTTTGTGATTAG
GCACCATAAACACATTCTCCTCATTAGGATAAATGATATTGATGATTTTCTTTTCCATGGAAATC
TTTTCTTTGCCCTATTTTCCTTAAAATCAAAGTTCATCCCTTAAATAAGACAAGCATCGATTCTC
ATAACAGTCTCCATTCTTTTCAAGATTGGGAACCAAAAACGCCTTCACTTCTTTAGGAGACATGA
CATTGATGCTTTGGTGTCG
Done.