Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2551
Parameters: 2 7 7 80 10 50 1000
Length:  79150

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
172--232
15
3.7
16
76
19
54
34
0
4
60
1.18
535--565
2
15.5
2
100
0
62
48
0
51
0
1.00
761--798
2
19.0
2
88
0
58
50
0
0
50
1.00
1376--1405
2
15.5
2
93
6
53
50
0
0
50
1.00
1542--1597
16
3.4
16
92
2
94
57
0
0
42
0.99
9186--9223
19
2.0
20
85
15
53
42
2
0
55
1.14
9167--9232
35
1.9
36
82
14
86
46
1
0
51
1.10
11199--11253
21
2.6
22
77
8
60
32
1
1
63
1.15
11597--11664
31
2.2
30
87
10
93
41
1
0
57
1.08
11638--11691
26
2.1
26
85
0
72
31
3
1
62
1.23
11966--12019
10
5.2
10
76
14
56
29
0
3
66
1.09
11966--12020
11
5.2
11
78
8
60
29
0
3
67
1.08
11986--12033
21
2.2
20
79
13
51
41
0
4
54
1.20
12364--12439
26
2.8
26
80
13
84
46
0
0
53
1.00
13531--13568
2
19.0
2
88
0
58
55
0
0
44
0.99
15240--15270
2
15.5
2
100
0
62
48
0
0
51
1.00
15805--15989
34
5.5
34
87
3
257
40
26
7
25
1.82
20055--20117
19
3.3
19
90
0
90
34
19
17
28
1.94
20422--20604
34
5.4
34
87
3
253
39
26
7
25
1.83
20862--20886
2
12.5
2
100
0
50
52
0
0
48
1.00
20997--21039
18
2.5
17
77
7
52
32
0
0
67
0.91
25158--25206
21
2.3
21
75
3
53
51
6
4
38
1.46
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25701--25734
17
1.9
18
94
5
61
50
0
5
44
1.26
28680--28713
16
2.1
16
100
0
68
44
5
5
44
1.52
29158--29198
2
20.5
2
100
0
82
51
0
0
48
1.00
36764--36808
22
2.0
22
100
0
90
48
17
20
13
1.80
37875--37984
51
2.1
51
79
12
118
57
0
1
40
1.16
40466--40511
18
2.6
18
82
10
58
36
2
4
56
1.31
41012--41041
15
2.0
15
100
0
60
40
0
6
53
1.27
45227--45252
2
13.0
2
100
0
52
50
0
0
50
1.00
47876--47948
36
2.0
36
94
0
128
42
5
4
47
1.45
48514--48539
2
13.0
2
100
0
52
50
0
0
50
1.00
48816--48857
22
1.9
22
85
9
59
23
0
14
61
1.32
49345--49383
2
19.5
2
100
0
78
48
0
0
51
1.00
50127--51852
45
38.2
45
89
4
2406
46
13
9
31
1.75
51587--51698
56
2.0
56
91
5
181
42
9
9
37
1.71
51541--51726
101
1.8
102
88
5
288
45
10
9
34
1.70
51643--51862
44
4.9
44
76
7
203
50
7
6
35
1.56
52930--52972
22
2.0
23
86
9
63
46
2
0
51
1.13
53322--53391
23
3.0
22
66
18
61
40
4
5
50
1.46
53310--53410
28
3.9
28
75
21
114
38
3
4
52
1.42
53314--53421
47
2.3
47
84
6
121
40
3
5
50
1.44
53463--53501
11
3.5
11
86
13
53
33
0
0
66
0.92
53719--53787
15
4.4
15
72
15
59
71
0
1
27
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69401--69563
80
2.0
81
90
1
256
35
20
7
36
1.81
72643--72691
18
2.8
17
76
11
55
32
0
0
67
0.91
74579--74618
21
1.9
21
94
0
71
37
0
22
40
1.54
74604--74643
20
2.0
21
85
5
55
42
2
12
42
1.56
77968--78022
21
2.6
21
88
0
74
38
5
23
32
1.78

Tables:   1

The End!