Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2553
Parameters: 2 7 7 80 10 50 1000
Length:  6108

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--112
34
3.3
35
83
5
140
27
8
26
37
1.84
866--911
21
2.2
22
88
7
69
39
0
4
56
1.19
1664--1700
7
4.9
8
83
12
51
21
0
0
78
0.75
1664--1700
15
2.5
15
86
0
56
21
0
0
78
0.75
2408--2444
19
1.9
19
88
0
56
27
5
2
64
1.28
3217--3285
33
2.1
33
100
0
138
50
8
2
37
1.48
3849--3890
15
2.8
15
82
13
59
64
0
0
35
0.94
5873--5914
11
3.7
11
78
15
50
40
0
0
59
0.97

Tables:   1

The End!