Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2557
Parameters: 2 7 7 80 10 50 1000
Length:  17189

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1894--2025
66
2.0
66
86
0
183
26
23
15
34
1.95
5397--5467
34
2.1
34
81
5
81
9
19
22
47
1.78
5541--5590
25
2.0
24
81
11
57
2
18
6
74
1.12
5543--5600
24
2.3
27
82
8
68
1
20
6
70
1.19
6059--6108
3
16.7
3
100
0
100
34
0
0
66
0.92
6053--6126
15
5.5
12
89
9
51
27
1
0
71
0.94
11034--11651
80
7.8
80
79
4
547
32
9
27
30
1.89
11034--11653
158
3.9
159
83
5
679
32
9
27
30
1.89
14007--14060
20
2.7
20
82
5
65
38
11
18
31
1.86
14118--14171
20
2.7
20
88
2
81
33
12
11
42
1.79
15004--15160
66
2.3
67
82
4
201
43
14
24
17
1.86
15051--15156
33
3.1
33
72
14
99
41
14
25
18
1.88
15270--15301
16
2.0
16
100
0
64
43
12
25
18
1.85
15474--15714
40
6.0
40
76
9
165
48
12
18
20
1.80
15456--15674
121
1.8
119
79
9
257
49
13
17
20
1.79
15507--15756
80
3.1
80
75
9
226
48
12
18
20
1.80
15616--15717
41
2.5
41
80
9
129
50
12
17
19
1.78
15694--15792
40
2.5
39
74
8
101
47
12
20
20
1.81
16576--16725
30
4.9
31
68
15
80
48
20
14
16
1.80
16580--16890
60
5.2
59
77
4
266
49
19
13
17
1.80
16578--16885
119
2.6
118
81
10
338
49
19
13
17
1.79

Tables:   1

The End!