Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2562
Parameters: 2 7 7 80 10 50 1000
Length:  13865

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4155--4216
32
1.9
33
90
3
99
29
16
12
41
1.85
4999--5577
166
3.5
165
79
9
547
30
10
7
51
1.64
5157--5585
165
2.6
164
82
8
516
31
10
7
51
1.62
5157--5641
166
2.9
166
79
6
522
30
10
7
50
1.66
6234--6264
14
2.3
13
94
5
53
90
9
0
0
0.46
8345--8416
20
3.5
20
76
10
72
26
16
13
43
1.86
8535--8660
44
2.8
43
76
16
123
23
18
11
46
1.81
10302--10399
28
3.5
28
82
10
105
27
15
31
25
1.95
10326--10399
29
2.6
28
89
6
114
31
14
29
24
1.95
12279--12318
11
3.9
11
78
18
50
0
0
15
85
0.61
12280--12318
19
2.0
19
90
5
60
0
0
15
84
0.62
12774--12819
20
2.2
22
92
7
78
41
10
15
32
1.82
12907--12974
19
3.9
18
76
23
83
38
14
11
35
1.83
12929--12953
13
1.9
13
100
0
50
32
16
16
36
1.90
12910--12972
32
2.0
32
96
0
117
36
15
12
34
1.86
13744--13865
55
2.2
56
88
4
176
21
22
26
29
1.99

Tables:   1

The End!