Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2565
Parameters: 2 7 7 80 10 50 1000
Length:  31577

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2414--2543
59
2.2
59
95
2
235
38
19
16
25
1.92
4934--5241
79
3.9
79
78
5
313
28
23
11
36
1.90
4938--5241
157
1.9
156
84
4
407
28
23
11
36
1.90
5202--5269
28
2.5
28
90
7
104
25
27
20
26
1.99
5500--5556
25
2.3
24
82
8
62
61
7
5
26
1.43
15534--15811
79
3.6
77
79
6
285
28
24
12
34
1.91
19104--19154
20
2.5
20
90
0
75
33
13
11
41
1.81
19111--19159
20
2.5
20
89
0
71
32
14
10
42
1.79
20017--20055
20
1.9
21
84
5
53
20
10
10
58
1.59
21305--21544
97
2.5
95
85
6
313
30
29
11
27
1.92
23131--23206
19
4.0
19
91
3
118
35
10
17
36
1.84
23244--23268
13
1.9
13
100
0
50
32
16
16
36
1.90
23277--23404
52
2.5
52
89
1
195
36
17
16
28
1.92
27169--27292
20
5.7
20
72
17
104
30
16
12
41
1.84
31425--31555
60
2.2
59
97
1
244
37
19
16
26
1.93

Tables:   1

The End!