Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2567
Parameters: 2 7 7 80 10 50 1000
Length:  30857

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
412--441
15
2.0
15
93
0
51
30
0
16
53
1.44
2076--2208
31
4.4
29
75
11
90
51
3
3
41
1.35
5380--5476
29
3.4
29
75
16
94
56
0
2
41
1.11
5424--5459
19
2.0
18
89
10
56
61
0
0
38
0.96
5363--5471
57
1.9
58
85
9
152
56
0
3
39
1.17
11529--11565
17
2.2
17
90
0
56
45
2
0
51
1.15
12618--12643
2
13.0
2
100
0
52
50
0
0
50
1.00
12908--12946
19
2.1
18
95
4
69
58
0
5
35
1.20
13672--13742
11
6.3
11
74
6
52
61
1
1
35
1.13
21735--21793
27
2.2
26
84
3
73
25
3
13
57
1.52
22305--22350
20
2.3
21
81
11
60
54
0
0
45
0.99
23606--23663
15
3.6
16
80
15
59
74
0
0
25
0.82
23606--23643
5
7.8
5
83
16
53
78
0
0
21
0.74
23807--23861
15
3.4
17
75
7
53
58
0
0
41
0.98
23778--23861
30
2.9
28
75
19
73
55
0
0
44
0.99
23782--23891
29
3.7
29
72
21
77
56
0
0
43
0.99
24827--24879
21
2.3
24
72
21
60
41
0
0
58
0.98
24833--24871
12
3.6
11
87
12
55
43
0
0
56
0.99
25585--25619
13
2.8
13
86
4
54
45
0
0
54
0.99
25820--25877
17
4.1
14
74
20
50
67
0
0
32
0.91
25829--25871
17
2.5
17
85
7
52
69
0
0
30
0.88
25822--25877
30
1.9
28
86
13
78
69
0
0
30
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26099--26173
20
3.9
19
78
13
75
37
0
1
61
1.05
26106--26173
19
3.7
18
80
9
66
38
0
0
61
0.96
26116--26217
36
2.8
37
75
18
88
46
0
0
53
1.00
26555--26590
17
2.2
16
90
5
54
33
0
0
66
0.92
26865--26890
2
13.0
2
100
0
52
50
0
0
50
1.00
27119--27149
13
2.4
13
94
0
53
67
3
0
29
1.06
27571--27621
20
2.5
20
80
6
57
56
1
3
37
1.29
28384--28441
6
9.8
6
88
3
91
50
0
3
46
1.18
28384--28441
23
2.5
24
97
2
109
50
0
3
46
1.18
29256--29322
19
3.7
18
78
9
64
31
0
0
68
0.90
29272--29319
24
2.1
22
88
7
69
25
0
0
75
0.81
29280--29328
24
2.0
24
84
7
64
28
0
0
71
0.86
29604--29701
13
7.2
13
69
10
54
57
1
0
41
1.05
29609--29660
13
3.7
15
78
14
58
55
0
0
44
0.99
29604--29700
27
3.6
29
73
15
91
56
1
0
42
1.06
29886--29921
11
3.3
11
92
0
63
69
0
0
30
0.89
29902--29951
16
3.0
16
75
25
50
62
0
0
38
0.96

Tables:   1

The End!