Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2568
Parameters: 2 7 7 80 10 50 1000
Length:  27071

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1570--1614
16
2.8
16
86
6
56
33
4
2
60
1.29
2446--2511
34
1.9
35
81
9
82
48
0
1
50
1.10
2817--2850
14
2.2
16
90
10
54
35
0
5
58
1.22
2959--3011
19
2.7
20
76
5
54
54
0
0
45
0.99
2961--3017
20
2.9
19
80
12
62
56
0
0
43
0.99
2964--3024
21
3.0
19
80
9
59
59
0
0
40
0.98
8946--8997
26
2.0
26
100
0
104
23
11
26
38
1.89
18363--18409
24
1.9
25
86
4
69
59
0
0
40
0.97
18497--18549
11
5.1
11
72
19
51
37
0
0
62
0.96
18497--18571
31
2.5
29
82
10
80
40
1
0
58
1.06
18523--18580
29
1.9
31
82
10
75
48
1
1
48
1.22
18755--18820
2
35.0
2
80
11
77
51
0
3
45
1.16
18748--18804
26
2.1
28
93
6
100
54
0
0
45
0.99
19550--19591
14
2.8
16
79
20
54
57
9
0
33
1.31
20483--20517
2
17.5
2
93
0
61
45
0
2
51
1.16
21273--21675
19
21.2
19
66
24
78
64
4
2
28
1.25
21242--21555
127
2.6
122
76
15
294
65
4
1
29
1.19
21219--21556
9
38.2
9
65
25
79
65
3
1
29
1.19

Tables:   1

The End!