Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2574
Parameters: 2 7 7 80 10 50 1000
Length:  72774

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11394--11449
21
2.8
21
89
5
80
32
10
19
37
1.86
12397--12473
1
77.0
1
86
0
109
6
93
0
0
0.35
12397--12473
14
5.6
14
93
3
122
6
93
0
0
0.35
12399--12473
33
2.2
34
97
2
143
6
93
0
0
0.35
25049--25105
11
5.2
10
74
17
51
80
3
15
0
0.84
26072--26828
59
13.3
58
83
8
705
26
28
20
24
1.99
26072--26822
119
6.6
118
85
7
745
26
28
20
24
1.99
26072--26828
178
4.4
176
81
9
774
26
28
20
24
1.99
26067--26828
55
13.4
55
79
12
579
26
27
20
25
1.99
26602--26804
47
4.0
47
76
21
194
30
30
20
19
1.97
27574--27650
21
3.7
21
89
3
111
35
12
16
35
1.88
28624--28654
15
2.1
15
93
0
53
12
22
16
48
1.80
30458--30502
21
2.1
21
84
8
56
22
20
4
53
1.63
32696--32721
13
2.0
13
100
0
52
30
15
15
38
1.88
33672--33746
27
2.7
29
87
6
102
26
34
17
21
1.95
33732--33900
52
3.3
51
78
8
189
30
26
11
31
1.91
33555--33900
104
3.3
103
71
11
324
30
26
11
31
1.91
33558--34010
212
2.1
212
88
2
651
28
26
13
31
1.93
33621--34033
107
3.9
107
72
13
285
28
27
14
30
1.95
35208--35257
20
2.5
20
83
0
64
32
12
14
42
1.82
35823--35850
2
14.0
2
100
0
56
50
0
0
50
1.00
36974--37050
27
2.8
27
88
7
102
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42096--42146
14
3.4
14
72
27
50
56
0
0
43
0.99
42065--42169
32
3.1
34
82
9
126
59
0
0
40
1.04
42075--42189
20
5.4
22
69
16
73
58
0
0
40
1.04
45786--45839
26
2.1
26
82
0
63
7
27
0
64
1.20
46499--46540
21
2.0
22
85
4
59
47
2
0
50
1.14
47766--47796
4
7.8
4
100
0
62
22
0
0
77
0.77
54235--54262
14
2.0
14
100
0
56
35
7
21
35
1.81
60325--60742
209
2.0
209
95
0
746
38
9
10
42
1.70
60755--60782
14
2.0
14
100
0
56
50
7
7
35
1.57
64941--64971
6
5.2
6
100
0
62
19
32
32
16
1.94
69436--69471
2
18.0
2
100
0
72
50
0
0
50
1.00
70556--70594
2
19.5
2
100
0
78
51
0
0
48
1.00
71038--71108
20
3.5
20
80
1
61
30
11
9
47
1.72

Tables:   1

The End!