Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2576
Parameters: 2 7 7 80 10 50 1000
Length:  26920

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4238--4279
18
2.3
18
100
0
84
50
9
26
14
1.73
12249--12293
10
4.4
10
86
8
56
86
11
2
0
0.65
12247--12282
15
2.5
15
95
4
65
88
11
0
0
0.50
12252--12293
11
3.7
11
84
12
50
85
11
2
0
0.68
13520--14194
28
23.6
29
86
3
879
29
30
16
23
1.96
13520--14194
57
11.8
58
87
3
888
29
30
16
23
1.96
13520--14194
85
7.8
86
87
3
864
29
30
16
23
1.96
14130--14207
32
2.5
32
87
2
113
26
26
21
24
1.99
14771--14845
20
3.8
20
74
0
69
36
10
10
42
1.74
16062--16259
79
2.5
78
85
3
236
31
16
26
25
1.96
16215--16286
28
2.6
28
86
4
92
25
20
33
20
1.97
16269--16657
51
7.5
51
71
10
241
31
11
27
29
1.92
16477--16548
28
2.6
28
84
0
81
23
19
34
22
1.96
18996--19049
20
2.7
20
94
0
99
46
12
14
25
1.81
19072--19123
13
3.5
13
73
26
50
36
17
13
32
1.89
19080--19165
19
4.7
19
72
20
76
37
16
12
33
1.87
19072--19144
32
2.3
32
97
0
137
35
17
12
34
1.88
22466--22656
79
2.4
79
84
0
247
34
13
21
29
1.92
22643--22921
107
2.6
107
81
3
312
32
13
24
29
1.94
22798--22870
28
2.6
28
82
4
85
26
17
30
26
1.98
25286--25373
20
4.8
20
80
18
118
42
14
17
26
1.87
25286--25355
33
2.1
33
100
0
140
40
14
18
27
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25266--25373
53
2.0
53
89
3
164
41
12
16
28
1.86
25305--25335
13
2.4
13
100
0
62
38
16
16
29
1.90

Tables:   1

The End!