Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2580
Parameters: 2 7 7 80 10 50 1000
Length:  17515

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
508--532
1
25.0
1
100
0
50
0
0
0
100
0.00
3261--3292
16
2.0
16
100
0
64
18
31
6
43
1.75
4513--4551
19
2.0
20
85
5
53
41
0
0
58
0.98
4567--4601
16
2.1
17
89
5
54
57
0
2
40
1.14
5505--5562
2
29.0
2
100
0
116
50
0
0
50
1.00
8410--9460
154
6.8
154
77
8
856
41
17
14
27
1.88
8445--9452
308
3.3
308
81
6
1050
40
17
14
28
1.88
8410--9480
462
2.3
460
80
7
1149
41
17
14
27
1.88
11810--11864
23
2.4
24
76
11
62
67
3
0
29
1.08
13871--13895
13
1.9
13
100
0
50
32
16
16
36
1.90
13883--13935
20
2.6
21
84
3
72
39
15
16
28
1.89

Tables:   1

The End!