Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2586
Parameters: 2 7 7 80 10 50 1000
Length:  24516

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
280--304
10
2.5
10
100
0
50
72
0
12
16
1.13
3947--3991
19
2.3
19
85
11
56
28
13
4
53
1.59
3986--4088
5
21.8
5
70
20
53
35
7
0
56
1.28
3977--4054
23
3.6
23
75
16
94
33
10
1
55
1.42
3984--4056
18
3.8
18
78
16
83
34
9
0
56
1.32
4005--4063
9
7.0
9
76
18
56
33
10
0
55
1.33
3984--4091
41
2.7
40
91
4
164
35
9
0
55
1.32
4100--4159
20
2.7
22
82
10
70
38
1
0
60
1.07
13268--13304
11
3.5
11
88
7
58
62
0
8
29
1.24
13240--13306
21
3.3
19
83
10
71
59
0
10
29
1.31
17814--17852
21
1.9
21
94
5
71
30
25
10
33
1.89
18203--18245
7
5.4
8
79
20
54
76
0
11
11
1.02
18203--18243
16
2.6
16
100
0
82
75
0
12
12
1.05
18200--18253
16
2.9
19
79
15
60
75
0
12
11
1.04
21615--21659
22
2.0
22
95
0
81
55
0
2
42
1.12

Tables:   1

The End!