Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2589
Parameters: 2 7 7 80 10 50 1000
Length:  15688

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1106--1136
15
2.0
16
93
6
55
29
0
0
70
0.87
3275--3305
14
2.1
15
94
5
55
61
0
0
38
0.96
3680--3712
16
2.0
17
88
5
50
51
0
0
48
1.00
5238--5274
17
2.2
17
95
4
67
54
0
0
45
1.00
5210--5268
24
2.4
25
81
13
70
49
0
3
47
1.18
5278--5305
14
2.0
14
100
0
56
50
0
0
50
1.00
6198--6231
17
1.9
17
88
5
50
61
0
2
35
1.11
6814--6855
21
2.0
22
85
4
59
61
9
2
26
1.39
8611--8647
19
1.9
19
94
0
65
40
0
0
59
0.97
8983--9038
30
1.9
30
82
13
73
51
0
0
48
1.00
12763--12792
2
15.0
2
92
0
51
46
0
3
50
1.18
14209--14275
22
3.0
22
78
18
75
55
0
0
44
0.99
14209--14289
24
3.4
24
85
14
98
55
0
1
43
1.07
14553--14622
25
2.9
25
74
18
69
54
1
1
42
1.18
14562--14637
25
3.0
26
73
21
72
55
1
0
43
1.08
14564--14651
25
3.6
25
70
19
62
54
1
0
44
1.07
14695--14725
16
1.9
16
93
0
53
51
0
0
48
1.00
15051--15188
12
10.2
13
65
25
56
40
0
0
58
1.03
15068--15115
17
2.9
16
77
14
53
43
0
2
54
1.12
15136--15188
23
2.2
24
96
3
99
33
0
0
66
0.92
15137--15196
18
3.4
18
73
15
54
33
0
0
66
0.92
15136--15188
12
4.5
12
84
11
74
33
0
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15201--15240
17
2.4
17
87
4
55
47
0
0
52
1.00
15505--15574
24
3.0
24
76
15
74
51
0
0
48
1.00
15498--15532
18
2.0
18
88
5
54
51
2
0
45
1.16

Tables:   1

The End!