Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2603
Parameters: 2 7 7 80 10 50 1000
Length:  66178

Tables:   1   

This is table  1  of  1  ( 52 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3097--3153
21
2.7
21
83
8
62
0
22
10
66
1.22
8421--8463
19
2.2
20
87
4
61
44
2
2
51
1.27
15250--15369
51
2.4
51
88
4
172
44
10
15
29
1.81
15387--15441
20
2.7
21
85
5
76
32
14
10
41
1.81
15387--15460
21
3.6
20
87
7
78
33
13
10
41
1.79
17052--17080
5
6.0
5
92
8
51
82
0
0
17
0.66
17619--17666
22
2.2
22
100
0
96
16
14
16
52
1.76
20178--20247
22
3.0
23
81
12
72
52
0
0
47
1.00
20925--21008
15
6.1
15
70
22
60
61
1
0
36
1.04
20992--21077
18
4.6
18
68
27
54
56
0
0
43
0.99
20995--21039
23
1.9
24
90
4
74
57
0
0
42
0.98
20986--21106
34
3.5
34
77
10
111
60
0
0
39
0.97
21050--21116
6
11.2
6
77
15
50
62
0
1
35
1.04
21010--21067
18
3.5
17
74
25
61
56
0
0
43
0.99
20942--21123
17
9.8
18
68
18
56
62
0
0
36
1.04
22373--22427
25
2.2
26
83
9
69
32
1
1
63
1.15
27466--27507
9
4.8
9
79
2
50
50
0
0
50
1.00
28596--28640
22
2.1
22
84
12
58
11
0
17
71
1.14
28596--28641
21
2.2
21
81
14
51
10
0
19
69
1.17
28627--28743
45
2.6
45
94
0
216
21
0
25
52
1.46
30023--30048
13
2.0
13
100
0
52
38
15
15
30
1.88
32266--32310
21
2.1
21
84
8
56
53
4
20
22
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34114--34144
15
2.1
15
93
0
53
48
16
22
12
1.80
36158--36237
20
3.8
20
75
15
79
26
15
15
43
1.85
36223--36261
13
3.0
13
96
0
69
30
17
15
35
1.91
36382--36428
21
2.3
21
79
20
55
34
19
4
42
1.70
36384--36426
20
2.2
19
84
16
52
32
18
4
44
1.71
43331--43377
19
2.4
20
82
3
60
63
0
0
36
0.94
43620--43731
29
4.1
27
76
16
88
39
0
0
58
1.10
43632--43732
23
4.3
24
71
16
77
37
0
0
60
1.10
44145--44207
15
3.9
16
71
20
51
46
4
1
47
1.33
44203--44245
11
3.9
11
76
11
52
48
0
0
51
1.00
47777--47805
13
2.2
13
100
0
58
0
0
13
86
0.58
49196--49271
30
2.5
31
80
4
91
44
3
1
50
1.29
49193--49261
15
4.5
15
72
15
52
43
4
1
50
1.30
54344--54381
19
2.0
19
85
10
51
21
15
26
36
1.93
58113--58165
21
2.5
21
84
3
70
32
11
1
54
1.47
58113--58175
21
3.0
21
83
6
65
36
11
1
50
1.47
58776--58813
18
2.2
18
85
4
51
55
0
7
36
1.29
62984--63026
22
1.9
23
85
4
61
55
0
0
44
0.99
62994--63057
31
2.1
31
82
5
76
57
0
0
42
0.98
63022--63062
11
3.6
11
86
3
55
60
0
0
39
0.96
63084--63140
20
2.8
20
77
15
55
47
0
1
50
1.11
63091--63132
20
2.2
19
87
12
59
47
0
2
50
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64526--64605
41
2.0
41
85
9
112
52
0
0
47
1.00
64866--64951
17
5.2
17
67
23
60
59
1
1
38
1.13
65034--65064
10
3.1
10
90
0
53
54
0
0
45
0.99
65730--65779
15
3.4
15
68
15
50
42
0
0
58
0.98
65884--65916
8
4.1
8
96
0
57
60
0
0
39
0.97
65903--65963
29
2.1
30
84
3
79
49
0
0
50
1.00
65934--65979
23
2.0
24
91
4
76
58
0
0
41
0.98
65961--66031
37
1.9
37
85
5
99
57
0
0
42
0.98

Tables:   1

The End!