Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2607
Parameters: 2 7 7 80 10 50 1000
Length:  19739

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1629--1668
13
3.1
13
77
0
53
40
12
12
35
1.81
1716--1780
32
2.0
33
87
3
96
41
16
13
27
1.87
1836--1879
22
2.1
21
91
8
72
38
9
6
45
1.63
3187--3229
23
1.9
22
90
4
68
55
0
0
44
0.99
3634--3676
21
2.0
21
90
0
68
39
4
23
32
1.75
3643--3686
21
2.1
21
82
0
52
38
4
20
36
1.73
4933--4957
13
1.9
13
100
0
50
36
16
16
32
1.90
4915--4976
32
1.9
32
86
3
88
30
19
16
33
1.94
4942--4998
19
2.9
19
86
5
78
36
15
15
31
1.90
5043--5073
13
2.4
13
94
0
53
35
16
12
35
1.87
5027--5090
33
1.9
32
87
12
94
35
12
18
32
1.89
10469--10503
18
1.9
18
94
0
61
25
28
5
40
1.78
12164--12223
20
3.0
20
80
7
77
35
13
13
38
1.84
12163--12219
19
2.9
19
84
5
78
35
12
14
38
1.83
12185--12247
32
1.9
33
90
3
101
39
12
15
31
1.85
13779--13811
15
2.2
15
100
0
66
36
24
12
27
1.91
14150--14178
12
2.4
12
100
0
58
51
6
10
31
1.62
14955--14988
2
17.0
2
100
0
68
50
0
0
50
1.00
15141--15202
25
2.4
25
81
7
63
41
6
0
51
1.27
18213--18257
2
23.5
2
86
8
67
46
0
53
0
1.00
19570--19610
15
2.8
15
88
3
57
53
0
0
46
1.00

Tables:   1

The End!