Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2608
Parameters: 2 7 7 80 10 50 1000
Length:  23720

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6433--6486
20
2.7
20
94
0
90
38
20
11
29
1.87
6896--6984
13
5.9
13
72
27
70
34
13
17
33
1.89
6876--7005
32
4.0
32
97
1
242
34
12
17
35
1.87
6874--7003
19
7.8
18
70
29
110
33
12
17
36
1.87
7022--7076
19
2.9
19
97
0
101
40
12
10
36
1.79
7063--7087
13
1.9
13
100
0
50
32
16
16
36
1.90
10600--10676
36
2.1
36
97
0
145
16
10
14
58
1.63
17032--18130
42
26.2
42
78
5
913
14
29
19
36
1.91
18099--18182
43
2.0
43
81
6
100
13
20
19
47
1.82
18645--18707
14
4.8
13
75
14
51
73
1
0
25
0.93
18617--18689
24
3.0
24
71
23
64
73
2
1
21
1.03
18738--18820
43
2.0
41
85
4
112
25
24
21
28
1.99
18968--19008
20
2.0
20
100
0
82
41
9
24
24
1.85
19396--19490
49
2.0
48
82
2
118
28
40
15
15
1.89
19543--19628
30
2.8
31
77
8
95
29
39
12
18
1.88
19596--19686
22
4.3
22
68
16
66
29
43
12
14
1.81
19657--19746
31
2.9
31
88
0
126
22
41
20
16
1.90
19717--19783
22
3.2
22
83
8
79
22
44
20
11
1.84

Tables:   1

The End!