Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2609
Parameters: 2 7 7 80 10 50 1000
Length:  43786

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3335--3373
2
19.5
2
100
0
78
51
0
0
48
1.00
6131--6188
26
2.3
24
85
8
80
10
18
1
68
1.26
6995--7051
18
3.4
18
68
25
52
54
0
1
43
1.10
7004--7056
15
3.4
15
73
19
54
54
0
1
43
1.11
7075--7111
18
2.1
18
94
0
65
67
2
0
29
1.04
8691--8728
21
1.9
19
85
15
51
50
2
0
47
1.15
8698--8777
29
2.6
31
74
16
78
46
5
0
48
1.24
8700--8785
32
2.9
28
70
26
70
45
5
0
48
1.26
8631--9023
193
2.0
193
87
3
567
45
7
3
44
1.46
9342--9399
22
2.5
24
78
13
68
68
0
6
24
1.13
9416--9484
26
2.4
29
86
9
90
49
1
2
46
1.25
12294--12341
17
2.8
17
93
0
87
16
22
25
35
1.95
19875--20059
34
5.5
34
87
3
257
40
26
7
25
1.82
24474--24656
34
5.4
34
86
3
244
39
26
7
26
1.83
29487--29583
16
6.1
15
70
15
70
38
0
8
53
1.31
29752--29781
15
1.9
16
93
6
53
50
0
0
50
1.00
29879--29905
2
13.5
2
100
0
54
51
0
0
48
1.00
32218--32287
2
35.5
2
84
13
74
41
4
1
52
1.30
33664--33708
2
22.5
2
90
0
72
48
4
0
46
1.22
36829--36857
3
9.7
3
100
0
58
31
34
0
34
1.58
38385--38425
21
2.0
20
90
9
66
46
14
9
29
1.77
39413--39452
20
2.0
21
85
5
55
20
20
12
47
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40706--40755
27
2.0
25
81
14
59
24
36
16
24
1.94

Tables:   1

The End!