Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2612
Parameters: 2 7 7 80 10 50 1000
Length:  33087

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3640--3695
26
2.2
26
96
0
103
46
12
21
19
1.83
5680--5786
47
2.2
48
81
3
117
34
14
16
34
1.89
8328--8394
33
2.0
33
88
0
98
31
16
14
37
1.89
8457--8515
21
2.9
19
80
7
64
42
8
8
40
1.66
10502--10537
17
2.1
17
100
0
72
50
16
5
27
1.68
14055--14137
20
3.8
21
75
17
71
42
15
14
27
1.86
22446--22499
17
3.4
16
78
17
67
44
0
0
55
0.99
22456--22500
14
3.0
14
76
17
54
48
0
0
51
1.00
25594--25628
18
1.9
18
88
0
52
54
0
0
45
0.99
25699--25803
14
7.1
14
69
24
56
50
0
0
48
1.07
30548--30610
30
2.1
30
84
0
81
34
22
6
36
1.80

Tables:   1

The End!